RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 ATP11CQ8NB49 1132 aa9.98□□□□□ -0.81
ABCA1-202ENST00000374736 P3H4Q92791 437 aa9.98□□□□□ -0.81
ABCA1-202ENST00000374736 RPGRIP1Q96KN7 1286 aa9.98□□□□□ -0.81
ABCA1-202ENST00000374736 JADE2Q9NQC1 790 aa9.98□□□□□ -0.81
ABCA1-202ENST00000374736 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
ABCA1-202ENST00000374736 TADA2BQ86TJ2 420 aa9.97□□□□□ -0.81
ABCA1-202ENST00000374736 HAUS1Q96CS2 278 aa9.97□□□□□ -0.81
ABCA1-202ENST00000374736 JPH2Q9BR39 696 aaPredicted RBP9.97□□□□□ -0.81
ABCA1-202ENST00000374736 WDR33Q9C0J8 1336 aaKnown RBP9.97□□□□□ -0.81
ABCA1-202ENST00000374736 RNF10Q8N5U6 811 aaKnown RBP9.97□□□□□ -0.81
ABCA1-202ENST00000374736 TTC1Q99614 292 aa9.97□□□□□ -0.81
ABCA1-202ENST00000374736 PPFIA1Q13136 1202 aa9.97□□□□□ -0.81
ABCA1-202ENST00000374736 NOP14P78316 857 aaKnown RBP9.97□□□□□ -0.81
ABCA1-202ENST00000374736 HHATQ5VTY9 493 aa9.97□□□□□ -0.81
ABCA1-202ENST00000374736 RSPH9Q9H1X1 276 aaPredicted RBP9.97□□□□□ -0.81
ABCA1-202ENST00000374736 RAB3IPQ96QF0 476 aaPredicted RBP9.97□□□□□ -0.81
ABCA1-202ENST00000374736 ANLNQ9NQW6 1124 aa9.97□□□□□ -0.81
ABCA1-202ENST00000374736 VDRP11473 427 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 TMEM51Q9NW97 253 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 CCNB3Q8WWL7 1395 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 POTEB3A0JP26 581 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 DHX9Q08211 1270 aaKnown RBP9.96□□□□□ -0.81
ABCA1-202ENST00000374736 SKIDA1Q1XH10 827 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 CCDC144BQ3MJ40 725 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 SLFNL1Q499Z3 407 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 POTEBQ6S5H4 581 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 ANKRD27Q96NW4 1050 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 FAF1Q9UNN5 650 aaPredicted RBP9.96□□□□□ -0.81
ABCA1-202ENST00000374736 SNUPNO95149 360 aaKnown RBP9.96□□□□□ -0.81
ABCA1-202ENST00000374736 SAMD15Q9P1V8 674 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 TSC22D4Q9Y3Q8 395 aa9.96□□□□□ -0.81
ABCA1-202ENST00000374736 LRRIQ3A6PVS8 624 aaPredicted RBP9.96□□□□□ -0.82
ABCA1-202ENST00000374736 ACTN2P35609 894 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 CKAP4Q07065 602 aaKnown RBP9.96□□□□□ -0.82
ABCA1-202ENST00000374736 APBB1IPQ7Z5R6 666 aaPredicted RBP9.96□□□□□ -0.82
ABCA1-202ENST00000374736 CCDC159P0C7I6 412 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 CUL4BQ13620 913 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 THUMPD2Q9BTF0 503 aaKnown RBP9.96□□□□□ -0.82
ABCA1-202ENST00000374736 SLC44A4Q53GD3 710 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 DIABLOQ9NR28 239 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 FLOT1O75955 427 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
ABCA1-202ENST00000374736 MUM1L1Q5H9M0 696 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 Q9H521 79 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 DACH1Q9UI36 760 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.95□□□□□ -0.82
ABCA1-202ENST00000374736 RCN1Q15293 331 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 RCSD1Q6JBY9 416 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 ARHGAP24Q8N264 748 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 KIAA1524Q8TCG1 905 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 SCOCQ9UIL1 159 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 PRDM4Q9UKN5 801 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 CEP164Q9UPV0 1460 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 HSF2BPO75031 334 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 hCG_2014768A0A024R1R8 64 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 KIAA0753Q2KHM9 967 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 MYLK4Q86YV6 388 aaPredicted RBP9.95□□□□□ -0.82
ABCA1-202ENST00000374736 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.95□□□□□ -0.82
ABCA1-202ENST00000374736 SCINQ9Y6U3 715 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 ARPC4P59998 168 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 OLFM3Q96PB7 478 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 VPS18Q9P253 973 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 RWDD3Q9Y3V2 267 aa9.95□□□□□ -0.82
ABCA1-202ENST00000374736 NDUFAB1O14561 156 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 GIGYF1O75420 1035 aaPredicted RBP9.94□□□□□ -0.82
ABCA1-202ENST00000374736 TEX13AQ9BXU3 409 aaPredicted RBP9.94□□□□□ -0.82
ABCA1-202ENST00000374736 XBP1P17861 261 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 FLT3P36888 993 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 MAATS1Q7Z4T9 603 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 KRT75O95678 551 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 TDRD7Q8NHU6 1098 aaKnown RBP9.94□□□□□ -0.82
ABCA1-202ENST00000374736 SPZ1Q9BXG8 430 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 HNRNPCP07910 306 aaKnown RBP eCLIP9.94□□□□□ -0.822e-6■■■□□ 18
ABCA1-202ENST00000374736 FAM43BQ6ZT52 329 aaPredicted RBP9.94□□□□□ -0.82
ABCA1-202ENST00000374736 PRPF31Q8WWY3 499 aaKnown RBP9.94□□□□□ -0.82
ABCA1-202ENST00000374736 CFAP36Q96G28 342 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 SH2D4AQ9H788 454 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 ZNF711Q9Y462 761 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 SKOR1P84550 965 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 ARL10Q8N8L6 244 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 ATG3Q9NT62 314 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 TBC1D10BQ4KMP7 808 aaPredicted RBP9.94□□□□□ -0.82
ABCA1-202ENST00000374736 TUBA3EQ6PEY2 450 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 OTUD6AQ7L8S5 288 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 KRT38O76015 456 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 NME8Q8N427 588 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 HELLSQ9NRZ9 838 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 CARD8Q9Y2G2 431 aa9.94□□□□□ -0.82
ABCA1-202ENST00000374736 COG7P83436 770 aa9.93□□□□□ -0.82
ABCA1-202ENST00000374736 MRPL28Q13084 256 aaKnown RBP9.93□□□□□ -0.82
ABCA1-202ENST00000374736 AEBP2Q6ZN18 517 aaPredicted RBP9.93□□□□□ -0.82
ABCA1-202ENST00000374736 RGL1Q9NZL6 768 aa9.93□□□□□ -0.82
ABCA1-202ENST00000374736 SASH1O94885 1247 aa9.93□□□□□ -0.82
ABCA1-202ENST00000374736 TMED10P49755 219 aaKnown RBP9.93□□□□□ -0.82
ABCA1-202ENST00000374736 ADCY2Q08462 1091 aa9.93□□□□□ -0.82
ABCA1-202ENST00000374736 GPATCH3Q96I76 525 aa9.93□□□□□ -0.82
ABCA1-202ENST00000374736 MATR3P43243 847 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■■■■□ 20.2
ABCA1-202ENST00000374736 PHLDB3Q6NSJ2 640 aa9.93□□□□□ -0.82
ABCA1-202ENST00000374736 TRIM58Q8NG06 486 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms