RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 GOLGA6L10A0A0M3HER8 536 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 SYCE3A1L190 88 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 XAGE3Q8WTP9 111 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 ACTN2P35609 894 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 CAMK4Q16566 473 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 TMCO3Q6UWJ1 677 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
PHACTR4-202ENST00000373839 TRPM2O94759 1503 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 PPIP5K1Q6PFW1 1433 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 GRM8O00222 908 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 ZBTB43O43298 467 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 TTC22Q5TAA0 569 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 ZC3H12CQ9C0D7 883 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 DYDC1Q8WWB3 177 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 NIP7Q9Y221 180 aaKnown RBP eCLIP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 SMC1AQ14683 1233 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 LINS1Q8NG48 757 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 PABPN1LA6NDY0 278 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 WDR7Q9Y4E6 1490 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 EXOC1Q9NV70 894 aa12.73□□□□□ -0.37
PHACTR4-202ENST00000373839 RTL9Q8NET4 1388 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 CALML3P27482 149 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 NAP1L4Q99733 375 aaKnown RBP12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 VAT1LQ9HCJ6 419 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 ASXL2Q76L83 1435 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 CASQ1P31415 396 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 GJB2P29033 226 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 GUCY1B3Q02153 619 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 SH2D4AQ9H788 454 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 NCBP1Q09161 790 aaKnown RBP12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 BICD1Q96G01 975 aa12.72□□□□□ -0.37
PHACTR4-202ENST00000373839 TNNI2P48788 182 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 C6orf50Q9HD87 102 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 SLC4A4Q9Y6R1 1079 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 RTN1Q16799 776 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 PRC1O43663 620 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 KRT13P13646 458 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 FAM193AP78312 1265 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 IFFO1Q0D2I5 559 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 CTNNBL1Q8WYA6 563 aaPredicted RBP12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 CTAGE1Q96RT6 745 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 LIG1P18858 919 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
PHACTR4-202ENST00000373839 MCMDC2Q4G0Z9 681 aa12.71□□□□□ -0.38
PHACTR4-202ENST00000373839 ABCC10Q5T3U5 1492 aa12.71□□□□□ -0.38
PHACTR4-202ENST00000373839 ESPNB1AK53 854 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 TTC41PQ6P2S7 1318 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 KLF18A0A0U1RQI7 1052 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 PRPHP41219 470 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 ZFYVE9O95405 1425 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 SHTN1A0MZ66 631 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 CCDC184Q52MB2 194 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 CERS3Q8IU89 383 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 TTC12Q9H892 705 aaPredicted RBP12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
PHACTR4-202ENST00000373839 MACROD2A1Z1Q3 448 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 ATP8B2P98198 1209 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 UVSSAQ2YD98 709 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 HAND2P61296 217 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 UBE2HP62256 183 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 TBC1D9Q6ZT07 1266 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 TSNARE1Q96NA8 513 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 TRIM47Q96LD4 638 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 TFCP2L1Q9NZI6 479 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■□□□ 13.8
PHACTR4-202ENST00000373839 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 SIRT1Q96EB6 747 aa12.69□□□□□ -0.38
PHACTR4-202ENST00000373839 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 C16orf71Q8IYS4 520 aaPredicted RBP12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
PHACTR4-202ENST00000373839 COMMD10Q9Y6G5 202 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms