RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 FKBP15Q5T1M5 1219 aa13.71□□□□□ -0.22
DEPDC1-201ENST00000370966 USP48Q86UV5 1035 aa13.71□□□□□ -0.22
DEPDC1-201ENST00000370966 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.22
DEPDC1-201ENST00000370966 KIF5CO60282 957 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 SPTY2D1Q68D10 685 aaPredicted RBP13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 KRT23Q9C075 422 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 BMP15O95972 392 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 KCNA6P17658 529 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 TMCO3Q6UWJ1 677 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 BAG3O95817 575 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 TMEM266Q2M3C6 531 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 NFATC2IPQ8NCF5 419 aa13.7□□□□□ -0.22
DEPDC1-201ENST00000370966 ZBTB43O43298 467 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 PPP1R12BO60237 982 aaPredicted RBP13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 KIF20AO95235 890 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 NMIQ13287 307 aaPredicted RBP13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 TCEANC2Q96MN5 208 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 H0YHG0 523 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 CLCN1P35523 988 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 CNPY2Q9Y2B0 182 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 GOLGA6L9A6NEM1 432 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 RNMTO43148 476 aaKnown RBP13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 SPA17Q15506 151 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 CRACR2BQ8N4Y2 399 aaPredicted RBP13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 PAG1Q9NWQ8 432 aa13.69□□□□□ -0.22
DEPDC1-201ENST00000370966 URI1O94763 535 aaPredicted RBP13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 AK2P54819 239 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 WTAPQ15007 396 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 Q6ZUG5 572 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 TSG101Q99816 390 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 TCP11L1Q9NUJ3 509 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 AOX1Q06278 1338 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 MBD5Q9P267 1494 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 TSPY2A6NKD2 308 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 BIN1O00499 593 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 TMEM132AQ24JP5 1023 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 RPGRQ92834 1020 aaKnown RBP13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 ATP10AO60312 1499 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 SYKP43405 635 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 MRPS27Q92552 414 aaKnown RBP13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 TAF4BQ92750 862 aa13.68□□□□□ -0.22
DEPDC1-201ENST00000370966 KIF4BQ2VIQ3 1234 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 G2E3Q7L622 706 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 ESR2Q92731 530 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 SIRT1Q96EB6 747 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 UBA7P41226 1012 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 HS1BP3Q53T59 392 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 CCDC150Q8NCX0 1101 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 DACT1Q9NYF0 836 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 AMPD3Q01432 767 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 DNM1Q05193 864 aaKnown RBP13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 NGLY1Q96IV0 654 aa13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 C16orf45Q96MC5 204 aaPredicted RBP13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
DEPDC1-201ENST00000370966 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 IL2RBP14784 551 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 SLC9C2Q5TAH2 1124 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 TMC6Q7Z403 805 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 ALG1Q9BT22 464 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 YEATS4O95619 227 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 ZGPATQ8N5A5 531 aaKnown RBP13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 KAT14Q9H8E8 782 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 CCDC144CPQ8IYA2 1237 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
DEPDC1-201ENST00000370966 KIAA0232Q92628 1395 aa13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 RNF113AO15541 343 aaKnown RBP13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 ANKRD18AQ8IVF6 992 aa13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 RUFY3Q7L099 469 aa13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 TRMT1Q9NXH9 659 aaKnown RBP13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
DEPDC1-201ENST00000370966 CASQ1P31415 396 aa13.64□□□□□ -0.23
DEPDC1-201ENST00000370966 PRIM1P49642 420 aaKnown RBP13.64□□□□□ -0.23
DEPDC1-201ENST00000370966 TNIP1Q15025 636 aa13.64□□□□□ -0.23
DEPDC1-201ENST00000370966 VPS36Q86VN1 386 aa13.64□□□□□ -0.23
DEPDC1-201ENST00000370966 USO1O60763 962 aaKnown RBP13.64□□□□□ -0.23
DEPDC1-201ENST00000370966 MCM3P25205 808 aa13.64□□□□□ -0.23
DEPDC1-201ENST00000370966 RTN1Q16799 776 aa13.64□□□□□ -0.23
DEPDC1-201ENST00000370966 CCDC96Q2M329 555 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms