RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 CCT4P50991 539 aaKnown RBP16.6■□□□□ 0.25
PMF1-201ENST00000368273 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
PMF1-201ENST00000368273 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
PMF1-201ENST00000368273 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
PMF1-201ENST00000368273 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
PMF1-201ENST00000368273 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
PMF1-201ENST00000368273 F6X3S4 739 aa16.59■□□□□ 0.25
PMF1-201ENST00000368273 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
PMF1-201ENST00000368273 CENPQQ7L2Z9 268 aaPredicted RBP16.59■□□□□ 0.25
PMF1-201ENST00000368273 ZBTB38Q8NAP3 1195 aaPredicted RBP16.59■□□□□ 0.25
PMF1-201ENST00000368273 C7orf43Q8WVR3 580 aa16.59■□□□□ 0.25
PMF1-201ENST00000368273 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
PMF1-201ENST00000368273 CRAMP1Q96RY5 1269 aa16.59■□□□□ 0.25
PMF1-201ENST00000368273 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
PMF1-201ENST00000368273 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
PMF1-201ENST00000368273 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.24
PMF1-201ENST00000368273 DDX60Q8IY21 1712 aaKnown RBP16.58■□□□□ 0.24
PMF1-201ENST00000368273 LAMB2P55268 1798 aa16.58■□□□□ 0.24
PMF1-201ENST00000368273 NFKBIEO00221 500 aa16.57■□□□□ 0.24
PMF1-201ENST00000368273 IRS4O14654 1257 aaPredicted RBP16.57■□□□□ 0.24
PMF1-201ENST00000368273 RTL5Q5HYW3 569 aaPredicted RBP16.57■□□□□ 0.24
PMF1-201ENST00000368273 C9orf131Q5VYM1 1079 aa16.57■□□□□ 0.24
PMF1-201ENST00000368273 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
PMF1-201ENST00000368273 ZNF784Q8NCA9 323 aaPredicted RBP16.57■□□□□ 0.24
PMF1-201ENST00000368273 FER1L6Q2WGJ9 1857 aa16.56■□□□□ 0.24
PMF1-201ENST00000368273 NEURL1BA8MQ27 555 aa16.56■□□□□ 0.24
PMF1-201ENST00000368273 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
PMF1-201ENST00000368273 RASSF7Q02833 373 aa16.56■□□□□ 0.24
PMF1-201ENST00000368273 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
PMF1-201ENST00000368273 SBF1O95248 1867 aa16.56■□□□□ 0.24
PMF1-201ENST00000368273 IGHDP01880 384 aa16.55■□□□□ 0.24
PMF1-201ENST00000368273 LMNB1P20700 586 aa16.55■□□□□ 0.24
PMF1-201ENST00000368273 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
PMF1-201ENST00000368273 CCDC93Q567U6 631 aa16.55■□□□□ 0.24
PMF1-201ENST00000368273 LINS1Q8NG48 757 aa16.55■□□□□ 0.24
PMF1-201ENST00000368273 RWDD1Q9H446 243 aaPredicted RBP16.55■□□□□ 0.24
PMF1-201ENST00000368273 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
PMF1-201ENST00000368273 CDHR2Q9BYE9 1310 aa16.54■□□□□ 0.24
PMF1-201ENST00000368273 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
PMF1-201ENST00000368273 PRELPP51888 382 aa16.54■□□□□ 0.24
PMF1-201ENST00000368273 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
PMF1-201ENST00000368273 JARID2Q92833 1246 aaPredicted RBP16.54■□□□□ 0.24
PMF1-201ENST00000368273 PPEF1O14829 653 aaPredicted RBP16.53■□□□□ 0.24
PMF1-201ENST00000368273 HDAC1Q13547 482 aaPredicted RBP16.53■□□□□ 0.24
PMF1-201ENST00000368273 GCKRQ14397 625 aa16.53■□□□□ 0.24
PMF1-201ENST00000368273 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
PMF1-201ENST00000368273 CC2D2BQ6DHV5 1058 aa16.53■□□□□ 0.24
PMF1-201ENST00000368273 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
PMF1-201ENST00000368273 RTKN2Q8IZC4 609 aa16.53■□□□□ 0.24
PMF1-201ENST00000368273 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
PMF1-201ENST00000368273 H7C1W4 665 aa16.52■□□□□ 0.24
PMF1-201ENST00000368273 PDE8AO60658 829 aa16.52■□□□□ 0.24
PMF1-201ENST00000368273 BBOX1O75936 387 aa16.52■□□□□ 0.24
PMF1-201ENST00000368273 GRAPQ13588 217 aa16.52■□□□□ 0.24
PMF1-201ENST00000368273 GRAPLQ8TC17 118 aaPredicted RBP16.52■□□□□ 0.24
PMF1-201ENST00000368273 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
PMF1-201ENST00000368273 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
PMF1-201ENST00000368273 GRIPAP1Q4V328 841 aa16.51■□□□□ 0.23
PMF1-201ENST00000368273 UBE3BQ7Z3V4 1068 aa16.51■□□□□ 0.23
PMF1-201ENST00000368273 MEIS3Q99687 375 aa16.51■□□□□ 0.23
PMF1-201ENST00000368273 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
PMF1-201ENST00000368273 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
PMF1-201ENST00000368273 SNED1Q8TER0 1413 aa16.51■□□□□ 0.23
PMF1-201ENST00000368273 GNAI3P08754 354 aa16.5■□□□□ 0.23
PMF1-201ENST00000368273 C1orf115Q9H7X2 142 aa16.5■□□□□ 0.23
PMF1-201ENST00000368273 TAF1P21675 1872 aa16.5■□□□□ 0.23
PMF1-201ENST00000368273 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
PMF1-201ENST00000368273 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
PMF1-201ENST00000368273 CASP7P55210 303 aa16.49■□□□□ 0.23
PMF1-201ENST00000368273 CCDC152Q4G0S7 254 aa16.49■□□□□ 0.23
PMF1-201ENST00000368273 TMC4Q7Z404 712 aa16.49■□□□□ 0.23
PMF1-201ENST00000368273 SLC51AQ86UW1 340 aa16.49■□□□□ 0.23
PMF1-201ENST00000368273 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
PMF1-201ENST00000368273 PSMD1Q99460 953 aa16.49■□□□□ 0.23
PMF1-201ENST00000368273 TMX4Q9H1E5 349 aaPredicted RBP16.49■□□□□ 0.23
PMF1-201ENST00000368273 CTSWP56202 376 aa16.48■□□□□ 0.23
PMF1-201ENST00000368273 CELF1Q92879 486 aaKnown RBP16.48■□□□□ 0.23
PMF1-201ENST00000368273 PLA2G12BQ9BX93 195 aa16.48■□□□□ 0.23
PMF1-201ENST00000368273 DICER1Q9UPY3 1922 aaKnown RBP16.48■□□□□ 0.23
PMF1-201ENST00000368273 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
PMF1-201ENST00000368273 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
PMF1-201ENST00000368273 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
PMF1-201ENST00000368273 ZNF526Q8TF50 670 aaPredicted RBP16.47■□□□□ 0.23
PMF1-201ENST00000368273 USP44Q9H0E7 712 aa16.47■□□□□ 0.23
PMF1-201ENST00000368273 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
PMF1-201ENST00000368273 SEC31BQ9NQW1 1179 aa16.47■□□□□ 0.23
PMF1-201ENST00000368273 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
PMF1-201ENST00000368273 MYH3P11055 1940 aa16.47■□□□□ 0.23
PMF1-201ENST00000368273 TIAM2Q8IVF5 1701 aa16.46■□□□□ 0.23
PMF1-201ENST00000368273 GNAI2P04899 355 aa16.46■□□□□ 0.23
PMF1-201ENST00000368273 RPS8P62241 208 aaKnown RBP16.46■□□□□ 0.23
PMF1-201ENST00000368273 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
PMF1-201ENST00000368273 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
PMF1-201ENST00000368273 COL4A1P02462 1669 aa16.46■□□□□ 0.23
PMF1-201ENST00000368273 GRM8O00222 908 aa16.45■□□□□ 0.22
PMF1-201ENST00000368273 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
PMF1-201ENST00000368273 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
PMF1-201ENST00000368273 LRRC37AA6NMS7 1700 aa16.45■□□□□ 0.22
PMF1-201ENST00000368273 UBTFL1P0CB47 393 aaPredicted RBP16.44■□□□□ 0.22
PMF1-201ENST00000368273 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 278.3 ms