RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ZNF589Q86UQ0 364 aaPredicted RBP16.09■□□□□ 0.17
PRKN-205ENST00000366897 PGBD1Q96JS3 809 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 ZNF165P49910 485 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 ZNF75DP51815 510 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
PRKN-205ENST00000366897 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 FSD1Q9BTV5 496 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
PRKN-205ENST00000366897 FTOQ9C0B1 505 aaKnown RBP eCLIP16.09■□□□□ 0.17
PRKN-205ENST00000366897 CTIFO43310 598 aaKnown RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 TOB2Q14106 344 aaPredicted RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 ERCC4Q92889 916 aaPredicted RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 CCDC9Q9Y3X0 531 aaKnown RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 USP27XA6NNY8 438 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 SASH1O94885 1247 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 ESCO1Q5FWF5 840 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 UTP14CQ5TAP6 766 aaKnown RBP16.08■□□□□ 0.16
PRKN-205ENST00000366897 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
PRKN-205ENST00000366897 COL16A1Q07092 1604 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 TPM3P06753 285 aa16.07■□□□□ 0.16
PRKN-205ENST00000366897 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
PRKN-205ENST00000366897 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 A0A0U1RQG5 324 aaPredicted RBP16.07■□□□□ 0.16
PRKN-205ENST00000366897 LRRC59Q96AG4 307 aaKnown RBP16.06■□□□□ 0.16
PRKN-205ENST00000366897 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
PRKN-205ENST00000366897 PXDNLA1KZ92 1463 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
PRKN-205ENST00000366897 TEFQ10587 303 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 NBPF6Q5VWK0 638 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 NBPF4Q96M43 638 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
PRKN-205ENST00000366897 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 CCDC129Q6ZRS4 1044 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 BRF1Q92994 677 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 SUCLG2Q96I99 432 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 CLSTN2Q9H4D0 955 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 JCADQ9P266 1359 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 RPS6KB1P23443 525 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 C11orf57Q6ZUT1 292 aaPredicted RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 KCNB2Q92953 911 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 BICC1Q9H694 974 aaKnown RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 NPHP3Q7Z494 1330 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 PLA2G4DQ86XP0 818 aa16.05■□□□□ 0.16
PRKN-205ENST00000366897 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
PRKN-205ENST00000366897 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
PRKN-205ENST00000366897 PDCP20941 246 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 USP16Q9Y5T5 823 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 ELP1O95163 1332 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 NPHP1O15259 732 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 PSMA5P28066 241 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
PRKN-205ENST00000366897 G3BP1Q13283 466 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRKN-205ENST00000366897 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 SEC62Q99442 399 aaKnown RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 DDX19AQ9NUU7 478 aaKnown RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
PRKN-205ENST00000366897 H3BQV1 296 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 TDRD7Q8NHU6 1098 aaKnown RBP16.02■□□□□ 0.16
PRKN-205ENST00000366897 LRRC37A3O60309 1634 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 NHSL1Q5SYE7 1610 aa16.02■□□□□ 0.16
PRKN-205ENST00000366897 SMTNL1A8MU46 457 aa16.02■□□□□ 0.15
PRKN-205ENST00000366897 SLFNL1Q499Z3 407 aa16.02■□□□□ 0.15
PRKN-205ENST00000366897 GUCY1B3Q02153 619 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 CTNNA3Q9UI47 895 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 MTX1Q13505 466 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 ZNF771Q7L3S4 317 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 TOPAZ1Q8N9V7 1692 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 RNF20Q5VTR2 975 aa16.01■□□□□ 0.15
PRKN-205ENST00000366897 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
PRKN-205ENST00000366897 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
PRKN-205ENST00000366897 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
PRKN-205ENST00000366897 RESTQ13127 1097 aa16■□□□□ 0.15
PRKN-205ENST00000366897 CEP135Q66GS9 1140 aa16■□□□□ 0.15
PRKN-205ENST00000366897 Q6ZUG5 572 aa16■□□□□ 0.15
PRKN-205ENST00000366897 ILDR2Q71H61 639 aa16■□□□□ 0.15
PRKN-205ENST00000366897 CACNA1FO60840 1977 aa16■□□□□ 0.15
PRKN-205ENST00000366897 COL15A1P39059 1388 aa16■□□□□ 0.15
PRKN-205ENST00000366897 PIP4K2AP48426 406 aaPredicted RBP16■□□□□ 0.15
PRKN-205ENST00000366897 FGD1P98174 961 aa16■□□□□ 0.15
PRKN-205ENST00000366897 ERC1Q8IUD2 1116 aa16■□□□□ 0.15
PRKN-205ENST00000366897 ZNF215Q9UL58 517 aaPredicted RBP16■□□□□ 0.15
PRKN-205ENST00000366897 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 GRM8O00222 908 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 TAF5LO75529 589 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
PRKN-205ENST00000366897 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
PRKN-205ENST00000366897 DNAJC2Q99543 621 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms