RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 LARP1BQ659C4 914 aaKnown RBP23.18■■□□□ 1.3
TRIM58-201ENST00000366481 TMEM51Q9NW97 253 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 NLRP2Q9NX02 1062 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 TPCN1Q9ULQ1 816 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 GRM8O00222 908 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 EPHA10Q5JZY3 1008 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 BICD2Q8TD16 824 aa23.18■■□□□ 1.3
TRIM58-201ENST00000366481 FAM208AQ9UK61 1670 aaKnown RBP23.17■■□□□ 1.3
TRIM58-201ENST00000366481 KRT85P78386 507 aa23.17■■□□□ 1.3
TRIM58-201ENST00000366481 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
TRIM58-201ENST00000366481 DACT1Q9NYF0 836 aa23.17■■□□□ 1.3
TRIM58-201ENST00000366481 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
TRIM58-201ENST00000366481 PTCD1O75127 700 aaKnown RBP23.17■■□□□ 1.3
TRIM58-201ENST00000366481 LIG1P18858 919 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 SLFNL1Q499Z3 407 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 MYD88Q99836 296 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 PAXBP1Q9Y5B6 917 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 GOLGA6L19H0YKK7 550 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 CREB3L3Q68CJ9 461 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 FILIP1Q7Z7B0 1213 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 ZNF589Q86UQ0 364 aaPredicted RBP23.16■■□□□ 1.3
TRIM58-201ENST00000366481 NFATC2IPQ8NCF5 419 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 RUFY2Q8WXA3 655 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 DDX41Q9UJV9 622 aaKnown RBP23.16■■□□□ 1.3
TRIM58-201ENST00000366481 ZSCAN25Q6NSZ9 544 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 FBXW7Q969H0 707 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 CBX8Q9HC52 389 aa23.16■■□□□ 1.3
TRIM58-201ENST00000366481 GPATCH3Q96I76 525 aa23.15■■□□□ 1.3
TRIM58-201ENST00000366481 FUCA2Q9BTY2 467 aa23.15■■□□□ 1.3
TRIM58-201ENST00000366481 LRRC2Q9BYS8 371 aa23.15■■□□□ 1.3
TRIM58-201ENST00000366481 MTMR6Q9Y217 621 aa23.15■■□□□ 1.3
TRIM58-201ENST00000366481 CCDC129Q6ZRS4 1044 aa23.15■■□□□ 1.3
TRIM58-201ENST00000366481 ZKSCAN1P17029 563 aaPredicted RBP23.14■■□□□ 1.3
TRIM58-201ENST00000366481 COPS6Q7L5N1 327 aa23.14■■□□□ 1.3
TRIM58-201ENST00000366481 XAGE3Q8WTP9 111 aa23.14■■□□□ 1.3
TRIM58-201ENST00000366481 CCDC171Q6TFL3 1326 aa23.14■■□□□ 1.3
TRIM58-201ENST00000366481 IGKV5-2P06315 115 aa23.14■■□□□ 1.29
TRIM58-201ENST00000366481 ZNF165P49910 485 aa23.14■■□□□ 1.29
TRIM58-201ENST00000366481 DNAJC25Q9H1X3 360 aa23.14■■□□□ 1.29
TRIM58-201ENST00000366481 PTPN14Q15678 1187 aa23.14■■□□□ 1.29
TRIM58-201ENST00000366481 CDC37L1Q7L3B6 337 aa23.14■■□□□ 1.29
TRIM58-201ENST00000366481 KIF18AQ8NI77 898 aa23.14■■□□□ 1.29
TRIM58-201ENST00000366481 DNAJC2Q99543 621 aaKnown RBP23.14■■□□□ 1.29
TRIM58-201ENST00000366481 SEC62Q99442 399 aaKnown RBP23.13■■□□□ 1.29
TRIM58-201ENST00000366481 ZNF215Q9UL58 517 aaPredicted RBP23.13■■□□□ 1.29
TRIM58-201ENST00000366481 MRVI1Q9Y6F6 885 aa23.13■■□□□ 1.29
TRIM58-201ENST00000366481 SLFN14P0C7P3 912 aa23.13■■□□□ 1.29
TRIM58-201ENST00000366481 TTC41PQ6P2S7 1318 aa23.13■■□□□ 1.29
TRIM58-201ENST00000366481 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
TRIM58-201ENST00000366481 DDX11Q96FC9 970 aa23.12■■□□□ 1.29
TRIM58-201ENST00000366481 TIGD1Q96MW7 591 aa23.12■■□□□ 1.29
TRIM58-201ENST00000366481 CACTINQ8WUQ7 758 aaKnown RBP23.12■■□□□ 1.29
TRIM58-201ENST00000366481 EVI5LQ96CN4 794 aa23.12■■□□□ 1.29
TRIM58-201ENST00000366481 ARHGEF25Q86VW2 580 aa23.12■■□□□ 1.29
TRIM58-201ENST00000366481 CSB-PGBD3P0DP91 1061 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 NECTIN1Q15223 517 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 TERF2Q15554 542 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 TTC6Q86TZ1 520 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 SPATA32Q96LK8 384 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 TAOK2Q9UL54 1235 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 SLC27A2O14975 620 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 ZNF75DP51815 510 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 ELF2Q15723 593 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 CHRNA2Q15822 529 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 LINS1Q8NG48 757 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
TRIM58-201ENST00000366481 CEBPZQ03701 1054 aaKnown RBP23.1■■□□□ 1.29
TRIM58-201ENST00000366481 ZSWIM6Q9HCJ5 1215 aa23.1■■□□□ 1.29
TRIM58-201ENST00000366481 ST7Q9NRC1 585 aa23.1■■□□□ 1.29
TRIM58-201ENST00000366481 BECN2A8MW95 431 aa23.1■■□□□ 1.29
TRIM58-201ENST00000366481 ZNF397Q8NF99 534 aaPredicted RBP23.1■■□□□ 1.29
TRIM58-201ENST00000366481 UBE3BQ7Z3V4 1068 aa23.09■■□□□ 1.29
TRIM58-201ENST00000366481 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
TRIM58-201ENST00000366481 HOXB7P09629 217 aa23.09■■□□□ 1.29
TRIM58-201ENST00000366481 ARID5BQ14865 1188 aa23.09■■□□□ 1.29
TRIM58-201ENST00000366481 AMOTQ4VCS5 1084 aa23.09■■□□□ 1.29
TRIM58-201ENST00000366481 ZNF496Q96IT1 587 aaPredicted RBP23.09■■□□□ 1.29
TRIM58-201ENST00000366481 PXDNLA1KZ92 1463 aa23.08■■□□□ 1.29
TRIM58-201ENST00000366481 ALDH1L1O75891 902 aa23.08■■□□□ 1.29
TRIM58-201ENST00000366481 PDIA6Q15084 440 aa23.08■■□□□ 1.29
TRIM58-201ENST00000366481 VPS53Q5VIR6 699 aa23.08■■□□□ 1.29
TRIM58-201ENST00000366481 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.29
TRIM58-201ENST00000366481 KMT5BQ4FZB7 885 aa23.08■■□□□ 1.29
TRIM58-201ENST00000366481 JAK2O60674 1132 aa23.08■■□□□ 1.28
TRIM58-201ENST00000366481 SYTL4Q96C24 671 aaPredicted RBP23.08■■□□□ 1.28
TRIM58-201ENST00000366481 SKILP12757 684 aa23.07■■□□□ 1.28
TRIM58-201ENST00000366481 IRX5P78411 483 aaPredicted RBP23.07■■□□□ 1.28
TRIM58-201ENST00000366481 BLOC1S2Q6QNY1 142 aa23.07■■□□□ 1.28
TRIM58-201ENST00000366481 LRRC37A3O60309 1634 aa23.07■■□□□ 1.28
TRIM58-201ENST00000366481 DDX58O95786 925 aaKnown RBP23.07■■□□□ 1.28
TRIM58-201ENST00000366481 MTX1Q13505 466 aa23.07■■□□□ 1.28
TRIM58-201ENST00000366481 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
TRIM58-201ENST00000366481 DDX46Q7L014 1031 aaKnown RBP23.07■■□□□ 1.28
TRIM58-201ENST00000366481 DDX21Q9NR30 783 aaKnown RBP eCLIP23.07■■□□□ 1.28
TRIM58-201ENST00000366481 MORC2Q9Y6X9 1032 aaPredicted RBP23.07■■□□□ 1.28
TRIM58-201ENST00000366481 GORABQ5T7V8 394 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 LARP1Q6PKG0 1096 aaKnown RBP23.06■■□□□ 1.28
TRIM58-201ENST00000366481 ERC1Q8IUD2 1116 aa23.06■■□□□ 1.28
TRIM58-201ENST00000366481 RAPGEF4Q8WZA2 1011 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms