RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 MAP3K6O95382 1288 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 WISP1O95388 367 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 GRIK1P39086 918 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 GTF2IP78347 998 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 VAC14Q08AM6 782 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 ELMSAN1Q6PJG2 1045 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 COL26A1Q96A83 441 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 SMG9Q9H0W8 520 aaKnown RBP4.09□□□□□ -1.75
MIR539-201ENST00000365690 BCS1LQ9Y276 419 aa4.09□□□□□ -1.75
MIR539-201ENST00000365690 DHX15O43143 795 aaKnown RBP4.08□□□□□ -1.76
MIR539-201ENST00000365690 C21orf2O43822 256 aa4.08□□□□□ -1.76
MIR539-201ENST00000365690 PSMA6P60900 246 aaKnown RBP4.08□□□□□ -1.76
MIR539-201ENST00000365690 GPLD1P80108 840 aa4.08□□□□□ -1.76
MIR539-201ENST00000365690 DHX32Q7L7V1 743 aaKnown RBP4.08□□□□□ -1.76
MIR539-201ENST00000365690 GALNT11Q8NCW6 608 aa4.08□□□□□ -1.76
MIR539-201ENST00000365690 SHKBP1Q8TBC3 707 aa4.08□□□□□ -1.76
MIR539-201ENST00000365690 IFT43Q96FT9 208 aa4.08□□□□□ -1.76
MIR539-201ENST00000365690 FAM46AQ96IP4 442 aaKnown RBP4.08□□□□□ -1.76
MIR539-201ENST00000365690 DBNDD2Q9BQY9 259 aa4.08□□□□□ -1.76
MIR539-201ENST00000365690 ZBTB7BO15156 539 aaPredicted RBP4.07□□□□□ -1.76
MIR539-201ENST00000365690 TARSP26639 723 aaKnown RBP4.07□□□□□ -1.76
MIR539-201ENST00000365690 ZNF124Q15973 351 aa4.07□□□□□ -1.76
MIR539-201ENST00000365690 ZNF648Q5T619 568 aaPredicted RBP4.07□□□□□ -1.76
MIR539-201ENST00000365690 HFE2Q6ZVN8 426 aa4.07□□□□□ -1.76
MIR539-201ENST00000365690 KCNK4Q9NYG8 393 aa4.07□□□□□ -1.76
MIR539-201ENST00000365690 KIAA1024Q9UPX6 916 aa4.07□□□□□ -1.76
MIR539-201ENST00000365690 MSMPQ1L6U9 139 aa4.06□□□□□ -1.76
MIR539-201ENST00000365690 ALDH16A1Q8IZ83 802 aa4.06□□□□□ -1.76
MIR539-201ENST00000365690 ASIC4Q96FT7 647 aa4.06□□□□□ -1.76
MIR539-201ENST00000365690 PNMA5Q96PV4 448 aa4.06□□□□□ -1.76
MIR539-201ENST00000365690 PCSK7Q16549 785 aa4.05□□□□□ -1.76
MIR539-201ENST00000365690 IER5Q5VY09 327 aa4.05□□□□□ -1.76
MIR539-201ENST00000365690 KRT25Q7Z3Z0 450 aa4.05□□□□□ -1.76
MIR539-201ENST00000365690 IL22RA1Q8N6P7 574 aa4.05□□□□□ -1.76
MIR539-201ENST00000365690 MYRFLQ96LU7 910 aa4.05□□□□□ -1.76
MIR539-201ENST00000365690 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
MIR539-201ENST00000365690 NOD1Q9Y239 953 aa4.05□□□□□ -1.76
MIR539-201ENST00000365690 DBX1A6NMT0 343 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 J3QW42 95 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 ZNF865P0CJ78 1059 aaPredicted RBP4.04□□□□□ -1.76
MIR539-201ENST00000365690 INPP5BP32019 993 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 EML3Q32P44 896 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 KIAA1211Q6ZU35 1233 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 SHISA5Q8N114 240 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 UTP4Q969X6 686 aaKnown RBP4.04□□□□□ -1.76
MIR539-201ENST00000365690 PLD4Q96BZ4 506 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 FAM83CQ9BQN1 747 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 SRA1Q9HD15 236 aaKnown RBP4.04□□□□□ -1.76
MIR539-201ENST00000365690 CCDC39Q9UFE4 941 aa4.04□□□□□ -1.76
MIR539-201ENST00000365690 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.04□□□□□ -1.76
MIR539-201ENST00000365690 WDR64B1ANS9 1081 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 SASH3O75995 380 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 PAPLNO95428 1278 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 PRNPP04156 253 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 NRLP54845 237 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 PSME1Q06323 249 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 NCOA4Q13772 614 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 UVSSAQ2YD98 709 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 GDF6Q6KF10 455 aaPredicted RBP4.03□□□□□ -1.76
MIR539-201ENST00000365690 ADAMTSL4Q6UY14 1074 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 CLEC10AQ8IUN9 316 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 FAM20CQ8IXL6 584 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 C2orf49Q9BVC5 232 aaPredicted RBP4.03□□□□□ -1.76
MIR539-201ENST00000365690 CARMIL2Q6F5E8 1435 aa4.03□□□□□ -1.76
MIR539-201ENST00000365690 TGFBR3LH3BV60 316 aa4.02□□□□□ -1.77
MIR539-201ENST00000365690 JUNBP17275 347 aaPredicted RBP4.02□□□□□ -1.77
MIR539-201ENST00000365690 EIF2AK2P19525 551 aaKnown RBP4.02□□□□□ -1.77
MIR539-201ENST00000365690 CILP2Q8IUL8 1156 aa4.02□□□□□ -1.77
MIR539-201ENST00000365690 PIM2Q9P1W9 311 aa4.02□□□□□ -1.77
MIR539-201ENST00000365690 TRIM33Q9UPN9 1127 aa4.02□□□□□ -1.77
MIR539-201ENST00000365690 APBB1O00213 710 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 PPP1R12BO60237 982 aaPredicted RBP4.01□□□□□ -1.77
MIR539-201ENST00000365690 DKK1O94907 266 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 SKIP12755 728 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 CLDN10P78369 228 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 ACAD11Q709F0 780 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 MAP4K3Q8IVH8 894 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 DEPDC4Q8N2C3 294 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 TPCN2Q8NHX9 752 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 CEP41Q9BYV8 373 aa4.01□□□□□ -1.77
MIR539-201ENST00000365690 TLR7Q9NYK1 1049 aaKnown RBP4.01□□□□□ -1.77
MIR539-201ENST00000365690 LOC102724428A0A0B4J2F2 783 aa4□□□□□ -1.77
MIR539-201ENST00000365690 ADAM11O75078 769 aa4□□□□□ -1.77
MIR539-201ENST00000365690 F13BP05160 661 aa4□□□□□ -1.77
MIR539-201ENST00000365690 RARAP10276 462 aa4□□□□□ -1.77
MIR539-201ENST00000365690 IDH3AP50213 366 aa4□□□□□ -1.77
MIR539-201ENST00000365690 SIK1P57059 783 aa4□□□□□ -1.77
MIR539-201ENST00000365690 BEND4Q6ZU67 534 aa4□□□□□ -1.77
MIR539-201ENST00000365690 STAG2Q8N3U4 1231 aa4□□□□□ -1.77
MIR539-201ENST00000365690 TSEN2Q8NCE0 465 aaKnown RBP4□□□□□ -1.77
MIR539-201ENST00000365690 IL27Q8NEV9 243 aa4□□□□□ -1.77
MIR539-201ENST00000365690 NGLY1Q96IV0 654 aa4□□□□□ -1.77
MIR539-201ENST00000365690 LINC01387J3KSC0 135 aa3.99□□□□□ -1.77
MIR539-201ENST00000365690 M0R2N6 131 aa3.99□□□□□ -1.77
MIR539-201ENST00000365690 DDX3YO15523 660 aaKnown RBP3.99□□□□□ -1.77
MIR539-201ENST00000365690 LZTS3O60299 673 aaPredicted RBP3.99□□□□□ -1.77
MIR539-201ENST00000365690 BMP3P12645 472 aa3.99□□□□□ -1.77
MIR539-201ENST00000365690 FOSL1P15407 271 aa3.99□□□□□ -1.77
MIR539-201ENST00000365690 CD68P34810 354 aaPredicted RBP3.99□□□□□ -1.77
MIR539-201ENST00000365690 PREPP48147 710 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms