RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 GMPSP49915 693 aaPredicted RBP27.64■■■□□ 2.02
CD47-202ENST00000361309 GRM1Q13255 1194 aa27.64■■■□□ 2.02
CD47-202ENST00000361309 KRT24Q2M2I5 525 aa27.64■■■□□ 2.02
CD47-202ENST00000361309 CYP4F22Q6NT55 531 aa27.64■■■□□ 2.02
CD47-202ENST00000361309 DDX46Q7L014 1031 aaKnown RBP27.64■■■□□ 2.02
CD47-202ENST00000361309 SH3TC1Q8TE82 1336 aa27.64■■■□□ 2.01
CD47-202ENST00000361309 ECE1P42892 770 aa27.63■■■□□ 2.01
CD47-202ENST00000361309 NEUROD2Q15784 382 aa27.63■■■□□ 2.01
CD47-202ENST00000361309 KIAA2012Q0VF49 1180 aa27.62■■■□□ 2.01
CD47-202ENST00000361309 GRAPQ13588 217 aa27.62■■■□□ 2.01
CD47-202ENST00000361309 CIAPIN1Q6FI81 312 aa27.62■■■□□ 2.01
CD47-202ENST00000361309 CCDC146Q8IYE0 955 aa27.62■■■□□ 2.01
CD47-202ENST00000361309 GRAPLQ8TC17 118 aaPredicted RBP27.62■■■□□ 2.01
CD47-202ENST00000361309 ZNF428Q96B54 188 aa27.62■■■□□ 2.01
CD47-202ENST00000361309 TLL2Q9Y6L7 1015 aa27.62■■■□□ 2.01
CD47-202ENST00000361309 LRRC37AA6NMS7 1700 aa27.61■■■□□ 2.01
CD47-202ENST00000361309 GPR101Q96P66 508 aaPredicted RBP27.61■■■□□ 2.01
CD47-202ENST00000361309 LAS1LQ9Y4W2 734 aaKnown RBP27.61■■■□□ 2.01
CD47-202ENST00000361309 CHL1O00533 1208 aa27.6■■■□□ 2.01
CD47-202ENST00000361309 RAD17O75943 681 aa27.6■■■□□ 2.01
CD47-202ENST00000361309 BCL2L13Q9BXK5 485 aa27.6■■■□□ 2.01
CD47-202ENST00000361309 CHPF2Q9P2E5 772 aa27.6■■■□□ 2.01
CD47-202ENST00000361309 DUOX1Q9NRD9 1551 aa27.59■■■□□ 2.01
CD47-202ENST00000361309 TNIP1Q15025 636 aa27.58■■■□□ 2.01
CD47-202ENST00000361309 BEGAINQ9BUH8 593 aa27.58■■■□□ 2.01
CD47-202ENST00000361309 CDHR2Q9BYE9 1310 aa27.58■■■□□ 2.01
CD47-202ENST00000361309 POLR2AP24928 1970 aaKnown RBP27.57■■■□□ 2
CD47-202ENST00000361309 CELF2O95319 508 aaKnown RBP27.57■■■□□ 2
CD47-202ENST00000361309 GLIS2Q9BZE0 524 aaPredicted RBP27.57■■■□□ 2
CD47-202ENST00000361309 PGAP2Q9UHJ9 254 aa27.57■■■□□ 2
CD47-202ENST00000361309 YDJCA8MPS7 323 aa27.56■■■□□ 2
CD47-202ENST00000361309 HIRAP54198 1017 aaPredicted RBP27.56■■■□□ 2
CD47-202ENST00000361309 TMC4Q7Z404 712 aa27.56■■■□□ 2
CD47-202ENST00000361309 TRIM35Q9UPQ4 493 aa27.56■■■□□ 2
CD47-202ENST00000361309 AOC2O75106 756 aa27.55■■■□□ 2
CD47-202ENST00000361309 HDGFL1Q5TGJ6 251 aa27.55■■■□□ 2
CD47-202ENST00000361309 SAPCD2Q86UD0 394 aa27.55■■■□□ 2
CD47-202ENST00000361309 PLBD2Q8NHP8 589 aa27.55■■■□□ 2
CD47-202ENST00000361309 ABHD8Q96I13 439 aa27.55■■■□□ 2
CD47-202ENST00000361309 ANKRD13DQ6ZTN6 518 aa27.54■■■□□ 2
CD47-202ENST00000361309 TRPM4Q8TD43 1214 aa27.54■■■□□ 2
CD47-202ENST00000361309 RUNDC1Q96C34 613 aa27.54■■■□□ 2
CD47-202ENST00000361309 CNOT7Q9UIV1 285 aaKnown RBP27.54■■■□□ 2
CD47-202ENST00000361309 MYBBP1AQ9BQG0 1328 aaKnown RBP27.53■■■□□ 2
CD47-202ENST00000361309 SHTN1A0MZ66 631 aa27.53■■■□□ 2
CD47-202ENST00000361309 ZC3H15Q8WU90 426 aaKnown RBP27.53■■■□□ 2
CD47-202ENST00000361309 FAM89AQ96GI7 184 aa27.53■■■□□ 2
CD47-202ENST00000361309 ISCA1Q9BUE6 129 aa27.53■■■□□ 2
CD47-202ENST00000361309 ATP5J2-PTCD1G3V325 749 aa27.52■■■□□ 2
CD47-202ENST00000361309 MAP2K2P36507 400 aa27.52■■■□□ 2
CD47-202ENST00000361309 ZNF408Q9H9D4 720 aa27.52■■■□□ 2
CD47-202ENST00000361309 COL4A1P02462 1669 aa27.52■■■□□ 2
CD47-202ENST00000361309 CELF1Q92879 486 aaKnown RBP27.51■■□□□ 1.99
CD47-202ENST00000361309 DBF4Q9UBU7 674 aaPredicted RBP27.51■■□□□ 1.99
CD47-202ENST00000361309 TSKSQ9UJT2 592 aa27.51■■□□□ 1.99
CD47-202ENST00000361309 CASP8AP2Q9UKL3 1982 aa27.51■■□□□ 1.99
CD47-202ENST00000361309 H7C1D1 291 aa27.5■■□□□ 1.99
CD47-202ENST00000361309 HOXB7P09629 217 aa27.5■■□□□ 1.99
CD47-202ENST00000361309 SF3B3Q15393 1217 aaKnown RBP27.5■■□□□ 1.99
CD47-202ENST00000361309 WASHC4Q2M389 1173 aa27.5■■□□□ 1.99
CD47-202ENST00000361309 CDC37L1Q7L3B6 337 aa27.5■■□□□ 1.99
CD47-202ENST00000361309 MICALL2Q8IY33 904 aa27.5■■□□□ 1.99
CD47-202ENST00000361309 NSFL1CQ9UNZ2 370 aaKnown RBP27.5■■□□□ 1.99
CD47-202ENST00000361309 ZBTB12Q9Y330 459 aaPredicted RBP27.5■■□□□ 1.99
CD47-202ENST00000361309 WDR43Q15061 677 aaKnown RBP eCLIP27.49■■□□□ 1.99
CD47-202ENST00000361309 RTL5Q5HYW3 569 aaPredicted RBP27.49■■□□□ 1.99
CD47-202ENST00000361309 HHIPL1Q96JK4 782 aa27.49■■□□□ 1.99
CD47-202ENST00000361309 DBNDD1Q9H9R9 158 aa27.49■■□□□ 1.99
CD47-202ENST00000361309 PSMD14O00487 310 aa27.48■■□□□ 1.99
CD47-202ENST00000361309 DDX10Q13206 875 aaKnown RBP27.48■■□□□ 1.99
CD47-202ENST00000361309 RIMBP2O15034 1052 aa27.47■■□□□ 1.99
CD47-202ENST00000361309 HYPKQ9NX55 129 aa27.47■■□□□ 1.99
CD47-202ENST00000361309 POLLQ9UGP5 575 aa27.47■■□□□ 1.99
CD47-202ENST00000361309 C6orf229H3BNL8 230 aa27.46■■□□□ 1.99
CD47-202ENST00000361309 GPSM2P81274 684 aa27.46■■□□□ 1.99
CD47-202ENST00000361309 DUSP27Q5VZP5 1158 aa27.46■■□□□ 1.99
CD47-202ENST00000361309 USP48Q86UV5 1035 aa27.46■■□□□ 1.99
CD47-202ENST00000361309 DPF2Q92785 391 aa27.46■■□□□ 1.99
CD47-202ENST00000361309 ADAMTS8Q9UP79 889 aa27.46■■□□□ 1.99
CD47-202ENST00000361309 SAMD7Q7Z3H4 446 aa27.45■■□□□ 1.98
CD47-202ENST00000361309 CFAP44Q96MT7 982 aa27.45■■□□□ 1.98
CD47-202ENST00000361309 SCN9AQ15858 1988 aa27.45■■□□□ 1.98
CD47-202ENST00000361309 IRS4O14654 1257 aaPredicted RBP27.44■■□□□ 1.98
CD47-202ENST00000361309 DLK2Q6UY11 383 aa27.44■■□□□ 1.98
CD47-202ENST00000361309 TRIM28Q13263 835 aaKnown RBP27.43■■□□□ 1.98
CD47-202ENST00000361309 KCNQ5Q9NR82 932 aa27.43■■□□□ 1.98
CD47-202ENST00000361309 MBIPQ9NS73 344 aa27.43■■□□□ 1.98
CD47-202ENST00000361309 CA12O43570 354 aa27.42■■□□□ 1.98
CD47-202ENST00000361309 ECE2O60344 883 aa27.42■■□□□ 1.98
CD47-202ENST00000361309 EGFRP00533 1210 aa27.42■■□□□ 1.98
CD47-202ENST00000361309 BRPF1P55201 1214 aaPredicted RBP27.42■■□□□ 1.98
CD47-202ENST00000361309 DOK7Q18PE1 504 aa27.42■■□□□ 1.98
CD47-202ENST00000361309 TBC1D10BQ4KMP7 808 aaPredicted RBP27.42■■□□□ 1.98
CD47-202ENST00000361309 EYA3Q99504 573 aa27.42■■□□□ 1.98
CD47-202ENST00000361309 RPS8P62241 208 aaKnown RBP27.41■■□□□ 1.98
CD47-202ENST00000361309 RTL9Q8NET4 1388 aa27.4■■□□□ 1.98
CD47-202ENST00000361309 CCDC85CA6NKD9 419 aa27.4■■□□□ 1.98
CD47-202ENST00000361309 RPS12P25398 132 aaKnown RBP27.4■■□□□ 1.98
CD47-202ENST00000361309 HUNKP57058 714 aa27.4■■□□□ 1.98
CD47-202ENST00000361309 RIC3Q7Z5B4 369 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms