RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
APAF1-203ENST00000359972 GLRX3O76003 335 aaKnown RBP17.24■□□□□ 0.35
APAF1-203ENST00000359972 ARID5AQ03989 594 aa17.24■□□□□ 0.35
APAF1-203ENST00000359972 TSNAXIP1Q2TAA8 658 aa17.24■□□□□ 0.35
APAF1-203ENST00000359972 KIF1BPQ96EK5 621 aa17.24■□□□□ 0.35
APAF1-203ENST00000359972 SCAPERQ9BY12 1400 aa17.24■□□□□ 0.35
APAF1-203ENST00000359972 VCXQ9H320 206 aa17.24■□□□□ 0.35
APAF1-203ENST00000359972 DNM1Q05193 864 aaKnown RBP17.24■□□□□ 0.35
APAF1-203ENST00000359972 ARHGEF2Q92974 986 aaKnown RBP17.24■□□□□ 0.35
APAF1-203ENST00000359972 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
APAF1-203ENST00000359972 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 IFNKQ9P0W0 207 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 TXNDC9O14530 226 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 GJC1P36383 396 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 DDX12PQ92771 950 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 ATP6V1AP38606 617 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 TSC1Q92574 1164 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 VCX3BQ9H321 246 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 ARFGAP2Q8N6H7 521 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 MORC4Q8TE76 937 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 VAV2P52735 878 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 WHAMMP3Q1A5X7 153 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 WHAMMQ8TF30 809 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 BAIAP2L1Q9UHR4 511 aa17.23■□□□□ 0.35
APAF1-203ENST00000359972 GKAP1Q5VSY0 366 aaPredicted RBP17.22■□□□□ 0.35
APAF1-203ENST00000359972 MIS18AQ9NYP9 233 aa17.22■□□□□ 0.35
APAF1-203ENST00000359972 TUBB4AP04350 444 aa17.22■□□□□ 0.35
APAF1-203ENST00000359972 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
APAF1-203ENST00000359972 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
APAF1-203ENST00000359972 RBSNQ9H1K0 784 aa17.22■□□□□ 0.35
APAF1-203ENST00000359972 ZSCAN26Q16670 478 aa17.22■□□□□ 0.35
APAF1-203ENST00000359972 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
APAF1-203ENST00000359972 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
APAF1-203ENST00000359972 ACTN2P35609 894 aa17.22■□□□□ 0.35
APAF1-203ENST00000359972 RBM5P52756 815 aaKnown RBP eCLIP17.22■□□□□ 0.35
APAF1-203ENST00000359972 ZNF131P52739 623 aa17.21■□□□□ 0.35
APAF1-203ENST00000359972 KANK3Q6NY19 840 aa17.21■□□□□ 0.35
APAF1-203ENST00000359972 STK38LQ9Y2H1 464 aa17.21■□□□□ 0.35
APAF1-203ENST00000359972 CAPN7Q9Y6W3 813 aa17.21■□□□□ 0.35
APAF1-203ENST00000359972 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
APAF1-203ENST00000359972 KIF5AQ12840 1032 aa17.21■□□□□ 0.35
APAF1-203ENST00000359972 GBP5Q96PP8 586 aa17.21■□□□□ 0.35
APAF1-203ENST00000359972 KRT86O43790 486 aa17.21■□□□□ 0.34
APAF1-203ENST00000359972 CALML4Q96GE6 196 aa17.21■□□□□ 0.34
APAF1-203ENST00000359972 EXOC1Q9NV70 894 aa17.21■□□□□ 0.34
APAF1-203ENST00000359972 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.21■□□□□ 0.34
APAF1-203ENST00000359972 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
APAF1-203ENST00000359972 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 USH1CQ9Y6N9 552 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 NEK11Q8NG66 645 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 CARD6Q9BX69 1037 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
APAF1-203ENST00000359972 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
APAF1-203ENST00000359972 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 CEP126Q9P2H0 1117 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 ZNF213O14771 459 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 NLRP6P59044 892 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 AMPD3Q01432 767 aa17.2■□□□□ 0.34
APAF1-203ENST00000359972 KRT83P78385 493 aa17.19■□□□□ 0.34
APAF1-203ENST00000359972 PLEKHO1Q53GL0 409 aaPredicted RBP17.19■□□□□ 0.34
APAF1-203ENST00000359972 ARHGAP25P42331 645 aa17.19■□□□□ 0.34
APAF1-203ENST00000359972 TSPYL2Q9H2G4 693 aaPredicted RBP17.19■□□□□ 0.34
APAF1-203ENST00000359972 RANBP6O60518 1105 aaKnown RBP17.19■□□□□ 0.34
APAF1-203ENST00000359972 CCDC174Q6PII3 467 aa17.19■□□□□ 0.34
APAF1-203ENST00000359972 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
APAF1-203ENST00000359972 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
APAF1-203ENST00000359972 IFIT3O14879 490 aaKnown RBP17.19■□□□□ 0.34
APAF1-203ENST00000359972 MARCKSP29966 332 aaPredicted RBP17.19■□□□□ 0.34
APAF1-203ENST00000359972 GSDMBQ8TAX9 411 aa17.19■□□□□ 0.34
APAF1-203ENST00000359972 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
APAF1-203ENST00000359972 TBC1D5Q92609 795 aa17.19■□□□□ 0.34
APAF1-203ENST00000359972 CETN1Q12798 172 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 ORC3Q9UBD5 711 aaPredicted RBP17.18■□□□□ 0.34
APAF1-203ENST00000359972 RIPOR2Q9Y4F9 1068 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 RAB34Q9BZG1 259 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 CFAP157Q5JU67 520 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 RNF10Q8N5U6 811 aaKnown RBP17.18■□□□□ 0.34
APAF1-203ENST00000359972 E7EVH7 732 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
APAF1-203ENST00000359972 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 ERCC5P28715 1186 aaPredicted RBP17.18■□□□□ 0.34
APAF1-203ENST00000359972 PSMD6Q15008 389 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 ZNF365Q70YC5 407 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 THUMPD2Q9BTF0 503 aaKnown RBP17.18■□□□□ 0.34
APAF1-203ENST00000359972 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
APAF1-203ENST00000359972 RTL1A6NKG5 1358 aa17.18■□□□□ 0.34
APAF1-203ENST00000359972 MRRFQ96E11 262 aaKnown RBP17.17■□□□□ 0.34
APAF1-203ENST00000359972 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
APAF1-203ENST00000359972 NAPBQ9H115 298 aa17.17■□□□□ 0.34
APAF1-203ENST00000359972 UBXN1Q04323 297 aa17.17■□□□□ 0.34
APAF1-203ENST00000359972 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
APAF1-203ENST00000359972 F13A1P00488 732 aa17.17■□□□□ 0.34
APAF1-203ENST00000359972 PPM1FP49593 454 aaPredicted RBP17.17■□□□□ 0.34
APAF1-203ENST00000359972 TUBB4BP68371 445 aa17.17■□□□□ 0.34
APAF1-203ENST00000359972 MRPS27Q92552 414 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms