RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ZEB2O60315 1214 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 KARSQ15046 597 aaKnown RBP18.3■□□□□ 0.52
COL18A1-203ENST00000359759 SELENOOQ9BVL4 669 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 MAP3K2Q9Y2U5 619 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 USP48Q86UV5 1035 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 RASAL2Q9UJF2 1139 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 TBCAO75347 108 aaKnown RBP18.3■□□□□ 0.52
COL18A1-203ENST00000359759 ZWINTO95229 277 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 MFSD6Q6ZSS7 791 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 STXBP4Q6ZWJ1 553 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 CFAP58Q5T655 872 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 DPH6Q7L8W6 267 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 KIAA1107Q9UPP5 1409 aa18.3■□□□□ 0.52
COL18A1-203ENST00000359759 PHACTR2O75167 634 aa18.29■□□□□ 0.52
COL18A1-203ENST00000359759 ALDH1L2Q3SY69 923 aa18.29■□□□□ 0.52
COL18A1-203ENST00000359759 ANKS4BQ8N8V4 417 aa18.29■□□□□ 0.52
COL18A1-203ENST00000359759 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
COL18A1-203ENST00000359759 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
COL18A1-203ENST00000359759 CCDC129Q6ZRS4 1044 aa18.29■□□□□ 0.52
COL18A1-203ENST00000359759 ZSCAN22P10073 491 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-203ENST00000359759 MARCKSP29966 332 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-203ENST00000359759 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
COL18A1-203ENST00000359759 CYLC1P35663 651 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-203ENST00000359759 PAXIP1Q6ZW49 1069 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-203ENST00000359759 TTC31Q49AM3 519 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-203ENST00000359759 CCDC50Q8IVM0 306 aa18.29■□□□□ 0.52
COL18A1-203ENST00000359759 RHOXF2BP0C7M4 288 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 SYT1P21579 422 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 IFT81Q8WYA0 676 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 RHOXF2Q9BQY4 288 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 CTAGE9A4FU28 777 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 OPA1O60313 960 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 KIF5BP33176 963 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 TPD52P55327 224 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-203ENST00000359759 ZBTB3Q9H5J0 574 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 FAM160A1Q05DH4 1040 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
COL18A1-203ENST00000359759 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-203ENST00000359759 PLCD3Q8N3E9 789 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 TCEANC2Q96MN5 208 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 SPAG5Q96R06 1193 aa18.28■□□□□ 0.52
COL18A1-203ENST00000359759 TTC21AQ8NDW8 1320 aa18.27■□□□□ 0.52
COL18A1-203ENST00000359759 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.52
COL18A1-203ENST00000359759 ATP5J2-PTCD1G3V325 749 aa18.27■□□□□ 0.52
COL18A1-203ENST00000359759 TRIM27P14373 513 aa18.27■□□□□ 0.52
COL18A1-203ENST00000359759 TMX3Q96JJ7 454 aa18.27■□□□□ 0.52
COL18A1-203ENST00000359759 RMND1Q9NWS8 449 aa18.27■□□□□ 0.52
COL18A1-203ENST00000359759 IGHDP01880 384 aa18.27■□□□□ 0.52
COL18A1-203ENST00000359759 SMC6Q96SB8 1091 aa18.27■□□□□ 0.52
COL18A1-203ENST00000359759 TTC12Q9H892 705 aaPredicted RBP18.27■□□□□ 0.52
COL18A1-203ENST00000359759 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.51
COL18A1-203ENST00000359759 GOLGA1Q92805 767 aa18.27■□□□□ 0.51
COL18A1-203ENST00000359759 KCNK9Q9NPC2 374 aa18.27■□□□□ 0.51
COL18A1-203ENST00000359759 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.51
COL18A1-203ENST00000359759 CCDC25Q86WR0 208 aa18.26■□□□□ 0.51
COL18A1-203ENST00000359759 KLF18A0A0U1RQI7 1052 aa18.26■□□□□ 0.51
COL18A1-203ENST00000359759 CLGNO14967 610 aa18.26■□□□□ 0.51
COL18A1-203ENST00000359759 C10orf67Q8IYJ2 551 aa18.26■□□□□ 0.51
COL18A1-203ENST00000359759 NDC80O14777 642 aa18.26■□□□□ 0.51
COL18A1-203ENST00000359759 MAP7D1Q3KQU3 841 aa18.26■□□□□ 0.51
COL18A1-203ENST00000359759 TTC22Q5TAA0 569 aa18.26■□□□□ 0.51
COL18A1-203ENST00000359759 HEATR3Q7Z4Q2 680 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 LZTFL1Q9NQ48 299 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 ANAPC4Q9UJX5 808 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 C6orf229H3BNL8 230 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 AKNAD1Q5T1N1 836 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 WDR70Q9NW82 654 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 PDE4BQ07343 736 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 ALG1Q9BT22 464 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 CEP83Q9Y592 693 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 ECHDC1Q9NTX5 307 aa18.25■□□□□ 0.51
COL18A1-203ENST00000359759 GUCA1BQ9UMX6 200 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 CCDC172P0C7W6 258 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 BRF1Q92994 677 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 DHX58Q96C10 678 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
COL18A1-203ENST00000359759 PYM1Q9BRP8 204 aaKnown RBP18.24■□□□□ 0.51
COL18A1-203ENST00000359759 TLDC2A0PJX2 215 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 TACC1O75410 805 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 CPLX4Q7Z7G2 160 aa18.24■□□□□ 0.51
COL18A1-203ENST00000359759 NOL3O60936 208 aaKnown RBP18.23■□□□□ 0.51
COL18A1-203ENST00000359759 CCDC114Q96M63 670 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 PPARDQ03181 441 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 NAA25Q14CX7 972 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 DDX12PQ92771 950 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 ZSCAN16Q9H4T2 348 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-203ENST00000359759 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 TMCO4Q5TGY1 634 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 FAM212AQ96EL1 285 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 DDX46Q7L014 1031 aaKnown RBP18.23■□□□□ 0.51
COL18A1-203ENST00000359759 PLVAPQ9BX97 442 aa18.23■□□□□ 0.51
COL18A1-203ENST00000359759 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms