RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 NECAB1Q8N987 351 aa21.03■□□□□ 0.96
SHANK1-202ENST00000359082 TTC22Q5TAA0 569 aa21.03■□□□□ 0.96
SHANK1-202ENST00000359082 LRRC27Q9C0I9 530 aa21.03■□□□□ 0.96
SHANK1-202ENST00000359082 TSPY3P0CV98 308 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 TSPY8P0CW00 308 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 EXOC5O00471 708 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 STAT6P42226 847 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 UBE2HP62256 183 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 IFI16Q16666 785 aaKnown RBP21.02■□□□□ 0.96
SHANK1-202ENST00000359082 PPP1R42Q7Z4L9 355 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 ACTN2P35609 894 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 RMND1Q9NWS8 449 aa21.02■□□□□ 0.96
SHANK1-202ENST00000359082 ARHGEF11O15085 1522 aa21.02■□□□□ 0.95
SHANK1-202ENST00000359082 LDHCP07864 332 aa21.02■□□□□ 0.95
SHANK1-202ENST00000359082 CRNKL1Q9BZJ0 848 aaKnown RBP21.02■□□□□ 0.95
SHANK1-202ENST00000359082 PHF8Q9UPP1 1060 aa21.02■□□□□ 0.95
SHANK1-202ENST00000359082 SYKP43405 635 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 MRPS9P82933 396 aaKnown RBP21.01■□□□□ 0.95
SHANK1-202ENST00000359082 UBE3BQ7Z3V4 1068 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 ZNF830Q96NB3 372 aaPredicted RBP21.01■□□□□ 0.95
SHANK1-202ENST00000359082 LRRC2Q9BYS8 371 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 LRPPRCP42704 1394 aaKnown RBP21.01■□□□□ 0.95
SHANK1-202ENST00000359082 C6orf163Q5TEZ5 329 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 UBASH3AP57075 661 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 WTAPQ15007 396 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 HEATR3Q7Z4Q2 680 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 IPO4Q8TEX9 1081 aaKnown RBP21.01■□□□□ 0.95
SHANK1-202ENST00000359082 KLF18A0A0U1RQI7 1052 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 TMEM110-MUSTN1A8MSY1 372 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 FOXO3O43524 673 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 SSX2IPQ9Y2D8 614 aa21.01■□□□□ 0.95
SHANK1-202ENST00000359082 SRRTQ9BXP5 876 aaKnown RBP21■□□□□ 0.95
SHANK1-202ENST00000359082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21■□□□□ 0.95
SHANK1-202ENST00000359082 GJC1P36383 396 aa21■□□□□ 0.95
SHANK1-202ENST00000359082 IFIT1BQ5T764 474 aaKnown RBP21■□□□□ 0.95
SHANK1-202ENST00000359082 CCDC155Q8N6L0 562 aa21■□□□□ 0.95
SHANK1-202ENST00000359082 BBXQ8WY36 941 aaPredicted RBP21■□□□□ 0.95
SHANK1-202ENST00000359082 MBIPQ9NS73 344 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 HMG20BQ9P0W2 317 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 CNPY2Q9Y2B0 182 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 MCM5P33992 734 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 GSTO1P78417 241 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 EHBP1Q8NDI1 1231 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 MRVI1Q9Y6F6 885 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 AKR1B10O60218 316 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 ARL1P40616 181 aaPredicted RBP20.99■□□□□ 0.95
SHANK1-202ENST00000359082 ST5P78524 1137 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 ANO6Q4KMQ2 910 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 ADGRL1O94910 1474 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
SHANK1-202ENST00000359082 F8W031 263 aaPredicted RBP20.98■□□□□ 0.95
SHANK1-202ENST00000359082 RFC4P35249 363 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 DDX23Q9BUQ8 820 aaKnown RBP20.98■□□□□ 0.95
SHANK1-202ENST00000359082 MXRA7P84157 204 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 CKAP4Q07065 602 aaKnown RBP20.98■□□□□ 0.95
SHANK1-202ENST00000359082 NGLY1Q96IV0 654 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 SLC4A4Q9Y6R1 1079 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 STX8Q9UNK0 236 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 CAMSAP2Q08AD1 1489 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 CCDC172P0C7W6 258 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 MPHOSPH6Q99547 160 aaKnown RBP20.98■□□□□ 0.95
SHANK1-202ENST00000359082 PI4KAP2A4QPH2 592 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 PHACTR2O75167 634 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 ZSCAN22P10073 491 aaPredicted RBP20.98■□□□□ 0.95
SHANK1-202ENST00000359082 PI4KAP1Q8N8J0 262 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 ERMNQ8TAM6 284 aa20.98■□□□□ 0.95
SHANK1-202ENST00000359082 ALG1Q9BT22 464 aa20.97■□□□□ 0.95
SHANK1-202ENST00000359082 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
SHANK1-202ENST00000359082 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
SHANK1-202ENST00000359082 PICALMQ13492 652 aa20.97■□□□□ 0.95
SHANK1-202ENST00000359082 OTUD6BQ8N6M0 293 aa20.97■□□□□ 0.95
SHANK1-202ENST00000359082 ZSCAN16Q9H4T2 348 aaPredicted RBP20.97■□□□□ 0.95
SHANK1-202ENST00000359082 WASLO00401 505 aaPredicted RBP20.97■□□□□ 0.95
SHANK1-202ENST00000359082 BMS1Q14692 1282 aaKnown RBP20.97■□□□□ 0.95
SHANK1-202ENST00000359082 UVSSAQ2YD98 709 aa20.97■□□□□ 0.95
SHANK1-202ENST00000359082 APBB1IPQ7Z5R6 666 aaPredicted RBP20.97■□□□□ 0.95
SHANK1-202ENST00000359082 BRF1Q92994 677 aa20.97■□□□□ 0.95
SHANK1-202ENST00000359082 PAXBP1Q9Y5B6 917 aa20.97■□□□□ 0.95
SHANK1-202ENST00000359082 KRT13P13646 458 aa20.96■□□□□ 0.95
SHANK1-202ENST00000359082 CYP7A1P22680 504 aa20.96■□□□□ 0.95
SHANK1-202ENST00000359082 PTGS1P23219 599 aa20.96■□□□□ 0.95
SHANK1-202ENST00000359082 KRT23Q9C075 422 aa20.96■□□□□ 0.95
SHANK1-202ENST00000359082 ANXA1P04083 346 aa20.96■□□□□ 0.95
SHANK1-202ENST00000359082 RBM25P49756 843 aaKnown RBP20.96■□□□□ 0.95
SHANK1-202ENST00000359082 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
SHANK1-202ENST00000359082 IGHDP01880 384 aa20.96■□□□□ 0.95
SHANK1-202ENST00000359082 KRT28Q7Z3Y7 464 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 DPH6Q7L8W6 267 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 IQSEC3Q9UPP2 1182 aaPredicted RBP20.95■□□□□ 0.94
SHANK1-202ENST00000359082 UQCRFS1P1P0C7P4 283 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 CCDC152Q4G0S7 254 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 SREK1Q8WXA9 508 aaKnown RBP20.95■□□□□ 0.94
SHANK1-202ENST00000359082 ZBTB43O43298 467 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 FBF1Q8TES7 1133 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 GSTA5Q7RTV2 222 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 TMX3Q96JJ7 454 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 SPAG5Q96R06 1193 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 CTAGE1Q96RT6 745 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 IQCGQ9H095 443 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms