RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
ABCD4-201ENST00000356924 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
ABCD4-201ENST00000356924 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
ABCD4-201ENST00000356924 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
ABCD4-201ENST00000356924 TNNI3KQ59H18 835 aa13.54□□□□□ -0.24
ABCD4-201ENST00000356924 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
ABCD4-201ENST00000356924 FPGT-TNNI3KV9GXZ4 949 aa13.54□□□□□ -0.24
ABCD4-201ENST00000356924 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 GLRX3O76003 335 aaKnown RBP13.53□□□□□ -0.24
ABCD4-201ENST00000356924 LRRC24Q50LG9 513 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 EYA2O00167 538 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 CIAO1O76071 339 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 CHMLP26374 656 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 CTSWP56202 376 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 ARID3AQ99856 593 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
ABCD4-201ENST00000356924 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
ABCD4-201ENST00000356924 ERC2O15083 957 aa13.52□□□□□ -0.24
ABCD4-201ENST00000356924 PDE8AO60658 829 aa13.52□□□□□ -0.24
ABCD4-201ENST00000356924 IL15P40933 162 aaPredicted RBP13.52□□□□□ -0.24
ABCD4-201ENST00000356924 ZNF772Q68DY9 489 aaPredicted RBP13.52□□□□□ -0.24
ABCD4-201ENST00000356924 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.24
ABCD4-201ENST00000356924 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.24
ABCD4-201ENST00000356924 GPATCH3Q96I76 525 aa13.52□□□□□ -0.24
ABCD4-201ENST00000356924 CCDC85AQ96PX6 553 aaPredicted RBP13.52□□□□□ -0.24
ABCD4-201ENST00000356924 BCL2L12Q9HB09 334 aa13.52□□□□□ -0.24
ABCD4-201ENST00000356924 C4AP0C0L4 1744 aa13.52□□□□□ -0.25
ABCD4-201ENST00000356924 NTSR2O95665 410 aa13.52□□□□□ -0.25
ABCD4-201ENST00000356924 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
ABCD4-201ENST00000356924 CLEC4GQ6UXB4 293 aa13.52□□□□□ -0.25
ABCD4-201ENST00000356924 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
ABCD4-201ENST00000356924 USP26Q9BXU7 913 aa13.52□□□□□ -0.25
ABCD4-201ENST00000356924 NIP7Q9Y221 180 aaKnown RBP eCLIP13.52□□□□□ -0.25
ABCD4-201ENST00000356924 RGL2O15211 777 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
ABCD4-201ENST00000356924 KIF2CQ99661 725 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 ESYT1Q9BSJ8 1104 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 GREM2Q9H772 168 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
ABCD4-201ENST00000356924 LRP5O75197 1615 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 GPR108Q9NPR9 543 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 LRRC4BQ9NT99 713 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 CASZ1Q86V15 1759 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 SH3TC1Q8TE82 1336 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 COL24A1Q17RW2 1714 aa13.51□□□□□ -0.25
ABCD4-201ENST00000356924 CNTROBQ8N137 903 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 AK7Q96M32 723 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 ZNF609O15014 1411 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 GNPATO15228 680 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 IFIT5Q13325 482 aaKnown RBP13.5□□□□□ -0.25
ABCD4-201ENST00000356924 NARFQ9UHQ1 456 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 ITGA6P23229 1130 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 DBNDD2Q9BQY9 259 aa13.5□□□□□ -0.25
ABCD4-201ENST00000356924 HCLS1P14317 486 aaPredicted RBP13.49□□□□□ -0.25
ABCD4-201ENST00000356924 SRP68Q9UHB9 627 aaKnown RBP13.49□□□□□ -0.25
ABCD4-201ENST00000356924 RIC1Q4ADV7 1423 aa13.49□□□□□ -0.25
ABCD4-201ENST00000356924 UBR3Q6ZT12 1888 aa13.49□□□□□ -0.25
ABCD4-201ENST00000356924 A0A0U1RQG5 324 aaPredicted RBP13.49□□□□□ -0.25
ABCD4-201ENST00000356924 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
ABCD4-201ENST00000356924 SPRYD3Q8NCJ5 442 aa13.49□□□□□ -0.25
ABCD4-201ENST00000356924 IL25Q9H293 177 aa13.49□□□□□ -0.25
ABCD4-201ENST00000356924 TRIM37O94972 964 aa13.48□□□□□ -0.25
ABCD4-201ENST00000356924 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
ABCD4-201ENST00000356924 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
ABCD4-201ENST00000356924 ATP5JP18859 108 aa13.48□□□□□ -0.25
ABCD4-201ENST00000356924 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
ABCD4-201ENST00000356924 BOLA2Q9H3K6 86 aa13.48□□□□□ -0.25
ABCD4-201ENST00000356924 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
ABCD4-201ENST00000356924 CLCN1P35523 988 aa13.48□□□□□ -0.25
ABCD4-201ENST00000356924 ARHGEF1Q92888 912 aaKnown RBP13.48□□□□□ -0.25
ABCD4-201ENST00000356924 REC8O95072 547 aa13.47□□□□□ -0.25
ABCD4-201ENST00000356924 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
ABCD4-201ENST00000356924 EVI5LQ96CN4 794 aa13.47□□□□□ -0.25
ABCD4-201ENST00000356924 GZF1Q9H116 711 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-201ENST00000356924 TIMM10P62072 90 aa13.47□□□□□ -0.25
ABCD4-201ENST00000356924 SPEF2Q9C093 1822 aa13.46□□□□□ -0.25
ABCD4-201ENST00000356924 TBC1D2Q9BYX2 928 aa13.46□□□□□ -0.25
ABCD4-201ENST00000356924 CEP126Q9P2H0 1117 aa13.46□□□□□ -0.25
ABCD4-201ENST00000356924 COL4A1P02462 1669 aa13.46□□□□□ -0.25
ABCD4-201ENST00000356924 RTL9Q8NET4 1388 aa13.46□□□□□ -0.26
ABCD4-201ENST00000356924 A0A1B0GUL7 405 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 SGSM2O43147 1006 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 NEUROD6Q96NK8 337 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 ZPR1O75312 459 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 BECN1Q14457 450 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 LDHAL6AQ6ZMR3 332 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 BICDL1Q6ZP65 573 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 VGLL2Q8N8G2 317 aa13.45□□□□□ -0.26
ABCD4-201ENST00000356924 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
ABCD4-201ENST00000356924 EDC3Q96F86 508 aaKnown RBP13.44□□□□□ -0.26
ABCD4-201ENST00000356924 HAUS7Q99871 368 aa13.44□□□□□ -0.26
ABCD4-201ENST00000356924 SLKQ9H2G2 1235 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-201ENST00000356924 SEC31BQ9NQW1 1179 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms