RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 EXOC1Q9NV70 894 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 KIF5BP33176 963 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 GJC1P36383 396 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 C6orf229H3BNL8 230 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 PHACTR2O75167 634 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 SARNPP82979 210 aaKnown RBP13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 SPAG1Q07617 926 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
SPTBN1-202ENST00000356805 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.1□□□□□ -0.312e-7■■□□□ 14.5
SPTBN1-202ENST00000356805 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 KRT13P13646 458 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 DNAJC21Q5F1R6 531 aaKnown RBP13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 CCDC8Q9H0W5 538 aaPredicted RBP13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 HDXQ7Z353 690 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
SPTBN1-202ENST00000356805 CTAGE9A4FU28 777 aa13.08□□□□□ -0.31
SPTBN1-202ENST00000356805 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.31
SPTBN1-202ENST00000356805 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.31
SPTBN1-202ENST00000356805 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 ANAPC4Q9UJX5 808 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 SUPT6HQ7KZ85 1726 aaKnown RBP13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 TTC12Q9H892 705 aaPredicted RBP13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 RARSP54136 660 aaKnown RBP13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 MCM10Q7L590 875 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 HMG20BQ9P0W2 317 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 PPFIA3O75145 1194 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 ADAMTS2O95450 1211 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 PLS1Q14651 629 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 ZBTB9Q96C00 473 aa13.08□□□□□ -0.32
SPTBN1-202ENST00000356805 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 HCLS1P14317 486 aaPredicted RBP13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 ZBTB16Q05516 673 aa13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 RPGRIP1LQ68CZ1 1315 aa13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 SMC5Q8IY18 1101 aa13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 THEMISQ8N1K5 641 aaPredicted RBP13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
SPTBN1-202ENST00000356805 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 TRIM47Q96LD4 638 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 HYPKQ9NX55 129 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 RASAL2Q9UJF2 1139 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 KIF3CO14782 793 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 ARHGAP25P42331 645 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 CCDC172P0C7W6 258 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 GPTP24298 496 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 UBA7P41226 1012 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 SNX16P57768 344 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 ZNF622Q969S3 477 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■□□ 15.9
SPTBN1-202ENST00000356805 CYLC1P35663 651 aaPredicted RBP13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 PDE4BQ07343 736 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 MCM6Q14566 821 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 SELENOOQ9BVL4 669 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 CABP5Q9NP86 173 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 NOL3O60936 208 aaKnown RBP13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 MICU3Q86XE3 530 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 SLC26A6Q9BXS9 759 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 PRPHP41219 470 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 RAB3GAP1Q15042 981 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 USHBP1Q8N6Y0 703 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
SPTBN1-202ENST00000356805 BMP15O95972 392 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 ARID5AQ03989 594 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 IFT74Q96LB3 600 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 DAPK1P53355 1430 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 TTC36A6NLP5 189 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 STIM2Q9P246 746 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 TFIP11Q9UBB9 837 aaKnown RBP13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 GJB2P29033 226 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 HSP90AA4PQ58FG1 418 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 ZFYP08048 801 aaPredicted RBP13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 HAND2P61296 217 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 CEP57Q86XR8 500 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 GDPD2Q9HCC8 539 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 STAT6P42226 847 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 FAM76AQ8TAV0 307 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 SELENOSQ9BQE4 189 aa13.05□□□□□ -0.32
SPTBN1-202ENST00000356805 MFSD6Q6ZSS7 791 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 SMIM23A6NLE4 172 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 TTF1Q15361 905 aaPredicted RBP13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 CCDC102BQ68D86 513 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 PTGS1P23219 599 aa13.04□□□□□ -0.32
SPTBN1-202ENST00000356805 AFMP43652 599 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms