RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DUSP27Q5VZP5 1158 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 MSL1Q68DK7 614 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 NBPF10Q6P3W6 841 aaKnown RBP5.13□□□□□ -1.59
CNOT4-202ENST00000356162 NPM2Q86SE8 214 aaKnown RBP5.13□□□□□ -1.59
CNOT4-202ENST00000356162 NBPF15Q8N660 670 aa5.13□□□□□ -1.59
CNOT4-202ENST00000356162 SRP68Q9UHB9 627 aaKnown RBP5.13□□□□□ -1.59
CNOT4-202ENST00000356162 IBTKQ9P2D0 1353 aaPredicted RBP5.13□□□□□ -1.59
CNOT4-202ENST00000356162 CAMTA2O94983 1202 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 KRT24Q2M2I5 525 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 HDGFL1Q5TGJ6 251 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 SMIM5Q71RC9 77 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 DZIP3Q86Y13 1208 aaKnown RBP5.12□□□□□ -1.59
CNOT4-202ENST00000356162 NLGN1Q8N2Q7 840 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 ARXQ96QS3 562 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 PPP1R1BQ9UD71 204 aaPredicted RBP5.12□□□□□ -1.59
CNOT4-202ENST00000356162 ZNF652Q9Y2D9 606 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 LAMB2P55268 1798 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 E9PSI1 815 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 PROX2Q3B8N5 592 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 USPL1Q5W0Q7 1092 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 KIF6Q6ZMV9 814 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 TSR2Q969E8 191 aaKnown RBP5.12□□□□□ -1.59
CNOT4-202ENST00000356162 DDX21Q9NR30 783 aaKnown RBP eCLIP5.12□□□□□ -1.59
CNOT4-202ENST00000356162 ZNF330Q9Y3S2 320 aaPredicted RBP5.12□□□□□ -1.59
CNOT4-202ENST00000356162 SALL2Q9Y467 1007 aaPredicted RBP5.12□□□□□ -1.59
CNOT4-202ENST00000356162 CARMIL3Q8ND23 1372 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 N4BP2Q86UW6 1770 aaPredicted RBP5.12□□□□□ -1.59
CNOT4-202ENST00000356162 ANKRD31Q8N7Z5 1873 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 MAP3K15Q6ZN16 1313 aa5.12□□□□□ -1.59
CNOT4-202ENST00000356162 ERVV-1B6SEH8 477 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 MMP10P09238 476 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 EIF2S2P20042 333 aaKnown RBP5.11□□□□□ -1.59
CNOT4-202ENST00000356162 LRP10Q7Z4F1 713 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 PARP3Q9Y6F1 533 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 BRCA1P38398 1863 aaKnown RBP5.11□□□□□ -1.59
CNOT4-202ENST00000356162 COL11A2P13942 1736 aaPredicted RBP5.11□□□□□ -1.59
CNOT4-202ENST00000356162 RIC1Q4ADV7 1423 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 SENP3-EIF4A1A0A087X0R7 540 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 PIP4K2AP48426 406 aaPredicted RBP5.11□□□□□ -1.59
CNOT4-202ENST00000356162 PROSER3Q2NL68 480 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 TWISTNBQ3B726 338 aaPredicted RBP5.11□□□□□ -1.59
CNOT4-202ENST00000356162 CCDC30Q5VVM6 783 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 CLEC4GQ6UXB4 293 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 C8orf58Q8NAV2 365 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 KCNV2Q8TDN2 545 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 HYPKQ9NX55 129 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 CHPF2Q9P2E5 772 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 HCSTQ9UBK5 93 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 DBF4Q9UBU7 674 aaPredicted RBP5.11□□□□□ -1.59
CNOT4-202ENST00000356162 ZBED9Q6R2W3 1325 aa5.11□□□□□ -1.59
CNOT4-202ENST00000356162 POLRMTO00411 1230 aaKnown RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 MYL6BP14649 208 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TM4SF1P30408 202 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 DDR1Q08345 913 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 SLFN5Q08AF3 891 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 NFIXQ14938 502 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TSR1Q2NL82 804 aaKnown RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 KCTD12Q96CX2 325 aaKnown RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 NBPF3Q9H094 633 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 RABGEF1Q9UJ41 708 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TBC1D2BQ9UPU7 963 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 CD2APQ9Y5K6 639 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 PXDNLA1KZ92 1463 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 GRXCR2A6NFK2 248 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 MAP3K7O43318 606 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 EXOSC9Q06265 439 aaKnown RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 HSP90AB3PQ58FF7 597 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TTLL7Q6ZT98 887 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 MRPL50Q8N5N7 158 aaKnown RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TSPYL6Q8N831 410 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 XAGE3Q8WTP9 111 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 NECTIN2Q92692 538 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 STK31Q9BXU1 1019 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TNRC6CQ9HCJ0 1690 aaKnown RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 ARFGEF1Q9Y6D6 1849 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 ANXA1P04083 346 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 CT47B1P0C2W7 299 aaPredicted RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 OSBPP22059 807 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 HNRNPUQ00839 825 aaKnown RBP eCLIP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TBC1D9BQ66K14 1250 aa5.1□□□□□ -1.59
CNOT4-202ENST00000356162 TRMT2AQ8IZ69 625 aaKnown RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 FHDC1Q9C0D6 1143 aaPredicted RBP5.1□□□□□ -1.59
CNOT4-202ENST00000356162 RNF123Q5XPI4 1314 aa5.09□□□□□ -1.59
CNOT4-202ENST00000356162 VAMP4O75379 141 aa5.09□□□□□ -1.59
CNOT4-202ENST00000356162 DDX58O95786 925 aaKnown RBP5.09□□□□□ -1.59
CNOT4-202ENST00000356162 PARP10Q53GL7 1025 aa5.09□□□□□ -1.59
CNOT4-202ENST00000356162 GIGYF2Q6Y7W6 1299 aaKnown RBP5.09□□□□□ -1.59
CNOT4-202ENST00000356162 PLBD2Q8NHP8 589 aa5.09□□□□□ -1.59
CNOT4-202ENST00000356162 ZNF428Q96B54 188 aa5.09□□□□□ -1.59
CNOT4-202ENST00000356162 ZBTB3Q9H5J0 574 aa5.09□□□□□ -1.59
CNOT4-202ENST00000356162 DDX60Q8IY21 1712 aaKnown RBP5.09□□□□□ -1.6
CNOT4-202ENST00000356162 ELL2O00472 640 aaPredicted RBP5.09□□□□□ -1.6
CNOT4-202ENST00000356162 SERPINB2P05120 415 aa5.09□□□□□ -1.6
CNOT4-202ENST00000356162 HLFQ16534 295 aa5.09□□□□□ -1.6
CNOT4-202ENST00000356162 COPS6Q7L5N1 327 aa5.09□□□□□ -1.6
CNOT4-202ENST00000356162 SETDB2Q96T68 719 aa5.09□□□□□ -1.6
CNOT4-202ENST00000356162 NYXQ9GZU5 481 aa5.09□□□□□ -1.6
CNOT4-202ENST00000356162 KIAA1468Q9P260 1216 aa5.09□□□□□ -1.6
CNOT4-202ENST00000356162 PDZRN3Q9UPQ7 1066 aa5.09□□□□□ -1.6
CNOT4-202ENST00000356162 TRIM6-TRIM34B2RNG4 842 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms