RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 DDIT3P35638 169 aa13.61□□□□□ -0.23
SNU13-202ENST00000355257 HSCBQ8IWL3 235 aa13.61□□□□□ -0.23
SNU13-202ENST00000355257 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
SNU13-202ENST00000355257 F6X3S4 739 aa13.6□□□□□ -0.23
SNU13-202ENST00000355257 SRGNP10124 158 aa13.6□□□□□ -0.23
SNU13-202ENST00000355257 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
SNU13-202ENST00000355257 ATP8B2P98198 1209 aa13.6□□□□□ -0.23
SNU13-202ENST00000355257 RRAGCQ9HB90 399 aa13.6□□□□□ -0.23
SNU13-202ENST00000355257 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
SNU13-202ENST00000355257 KLRG2A4D1S0 409 aaPredicted RBP13.59□□□□□ -0.23
SNU13-202ENST00000355257 STYK1Q6J9G0 422 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 DNAJC5GQ8N7S2 189 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNU13-202ENST00000355257 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
SNU13-202ENST00000355257 LTBP3Q9NS15 1303 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 GLTPD2A6NH11 291 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 C21orf2O43822 256 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 APLP1P51693 650 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 FKBP5Q13451 457 aaPredicted RBP13.59□□□□□ -0.23
SNU13-202ENST00000355257 HLFQ16534 295 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 SLC4A10Q6U841 1118 aa13.59□□□□□ -0.23
SNU13-202ENST00000355257 C16orf71Q8IYS4 520 aaPredicted RBP13.59□□□□□ -0.23
SNU13-202ENST00000355257 SALL3Q9BXA9 1300 aa13.58□□□□□ -0.24
SNU13-202ENST00000355257 ANKRD36CQ5JPF3 1778 aa13.58□□□□□ -0.24
SNU13-202ENST00000355257 POTECB2RU33 542 aa13.58□□□□□ -0.24
SNU13-202ENST00000355257 ST5P78524 1137 aa13.58□□□□□ -0.24
SNU13-202ENST00000355257 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
SNU13-202ENST00000355257 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
SNU13-202ENST00000355257 SNED1Q8TER0 1413 aa13.57□□□□□ -0.24
SNU13-202ENST00000355257 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
SNU13-202ENST00000355257 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
SNU13-202ENST00000355257 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
SNU13-202ENST00000355257 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
SNU13-202ENST00000355257 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
SNU13-202ENST00000355257 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
SNU13-202ENST00000355257 SDSP20132 328 aa13.56□□□□□ -0.24
SNU13-202ENST00000355257 FSTL1Q12841 308 aa13.56□□□□□ -0.24
SNU13-202ENST00000355257 OTUD7AQ8TE49 926 aaPredicted RBP13.56□□□□□ -0.24
SNU13-202ENST00000355257 USP44Q9H0E7 712 aa13.56□□□□□ -0.24
SNU13-202ENST00000355257 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
SNU13-202ENST00000355257 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNU13-202ENST00000355257 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
SNU13-202ENST00000355257 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
SNU13-202ENST00000355257 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
SNU13-202ENST00000355257 ABCC12Q96J65 1359 aa13.55□□□□□ -0.24
SNU13-202ENST00000355257 IBTKQ9P2D0 1353 aaPredicted RBP13.55□□□□□ -0.24
SNU13-202ENST00000355257 LAMB2P55268 1798 aa13.55□□□□□ -0.24
SNU13-202ENST00000355257 RIC1Q4ADV7 1423 aa13.55□□□□□ -0.24
SNU13-202ENST00000355257 SCN4AP35499 1836 aa13.55□□□□□ -0.24
SNU13-202ENST00000355257 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
SNU13-202ENST00000355257 PDE1AP54750 535 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 STAP2Q9UGK3 403 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 NPR1P16066 1061 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 POLA2Q14181 598 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 RABEP1Q15276 862 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 CASC1Q6TDU7 716 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 LRRCC1Q9C099 1032 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
SNU13-202ENST00000355257 AOX1Q06278 1338 aa13.53□□□□□ -0.24
SNU13-202ENST00000355257 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
SNU13-202ENST00000355257 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
SNU13-202ENST00000355257 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
SNU13-202ENST00000355257 MCM4P33991 863 aa13.53□□□□□ -0.24
SNU13-202ENST00000355257 HTRA3P83110 453 aa13.53□□□□□ -0.24
SNU13-202ENST00000355257 PDIA6Q15084 440 aa13.53□□□□□ -0.24
SNU13-202ENST00000355257 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
SNU13-202ENST00000355257 ERBB4Q15303 1308 aa13.52□□□□□ -0.24
SNU13-202ENST00000355257 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 FAM177BA6PVY3 158 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 NPHP1O15259 732 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 RAB11FIP3O75154 756 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.25
SNU13-202ENST00000355257 CRY2Q49AN0 593 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 BEND3Q5T5X7 828 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 SOGA3Q5TF21 947 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 SMC1BQ8NDV3 1235 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 PHAXQ9H814 394 aaKnown RBP13.52□□□□□ -0.25
SNU13-202ENST00000355257 ADAMTSL1Q8N6G6 1762 aa13.52□□□□□ -0.25
SNU13-202ENST00000355257 REC8O95072 547 aa13.51□□□□□ -0.25
SNU13-202ENST00000355257 MYL6BP14649 208 aa13.51□□□□□ -0.25
SNU13-202ENST00000355257 OLFM4Q6UX06 510 aa13.51□□□□□ -0.25
SNU13-202ENST00000355257 ZNF34Q8IZ26 560 aa13.51□□□□□ -0.25
SNU13-202ENST00000355257 DNAAF4Q8WXU2 420 aa13.51□□□□□ -0.25
SNU13-202ENST00000355257 LRRFIP2Q9Y608 721 aaKnown RBP13.51□□□□□ -0.25
SNU13-202ENST00000355257 COL4A5P29400 1685 aa13.5□□□□□ -0.25
SNU13-202ENST00000355257 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
SNU13-202ENST00000355257 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
SNU13-202ENST00000355257 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
SNU13-202ENST00000355257 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
SNU13-202ENST00000355257 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
SNU13-202ENST00000355257 ERC2O15083 957 aa13.49□□□□□ -0.25
SNU13-202ENST00000355257 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
SNU13-202ENST00000355257 CD2BP2O95400 341 aaKnown RBP13.49□□□□□ -0.25
SNU13-202ENST00000355257 PROSER3Q2NL68 480 aa13.49□□□□□ -0.25
SNU13-202ENST00000355257 SUSD4Q5VX71 490 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms