RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 GTF3C6Q969F1 213 aa21.14■□□□□ 0.97
CTSB-202ENST00000353047 UHRF1BP1LA0JNW5 1464 aa21.14■□□□□ 0.97
CTSB-202ENST00000353047 ZNF75DP51815 510 aa21.14■□□□□ 0.97
CTSB-202ENST00000353047 TERF1P54274 439 aa21.14■□□□□ 0.97
CTSB-202ENST00000353047 NFATC2IPQ8NCF5 419 aa21.14■□□□□ 0.97
CTSB-202ENST00000353047 CHMP4AQ9BY43 222 aa21.14■□□□□ 0.97
CTSB-202ENST00000353047 NPHP3Q7Z494 1330 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 ELF2Q15723 593 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 ZSCAN25Q6NSZ9 544 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 KSR2Q6VAB6 950 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 ZNF710Q8N1W2 664 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 PHF8Q9UPP1 1060 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 CAMSAP1Q5T5Y3 1602 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 CHRNA2Q15822 529 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 RPAP1Q9BWH6 1393 aaPredicted RBP21.13■□□□□ 0.97
CTSB-202ENST00000353047 GJB4Q9NTQ9 266 aa21.13■□□□□ 0.97
CTSB-202ENST00000353047 COL3A1P02461 1466 aaPredicted RBP21.12■□□□□ 0.97
CTSB-202ENST00000353047 RPS6KB1P23443 525 aa21.12■□□□□ 0.97
CTSB-202ENST00000353047 LMBR1LQ6UX01 489 aa21.12■□□□□ 0.97
CTSB-202ENST00000353047 SMAP1Q8IYB5 467 aaPredicted RBP21.12■□□□□ 0.97
CTSB-202ENST00000353047 NAT10Q9H0A0 1025 aaKnown RBP21.12■□□□□ 0.97
CTSB-202ENST00000353047 SFPQP23246 707 aaKnown RBP eCLIP21.11■□□□□ 0.97
CTSB-202ENST00000353047 SYT10Q6XYQ8 523 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 ZNF215Q9UL58 517 aaPredicted RBP21.11■□□□□ 0.97
CTSB-202ENST00000353047 CD163L1Q9NR16 1453 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 PTPDC1A2A3K4 754 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 C11orf57Q6ZUT1 292 aaPredicted RBP21.11■□□□□ 0.97
CTSB-202ENST00000353047 ZNF594Q96JF6 807 aaPredicted RBP21.11■□□□□ 0.97
CTSB-202ENST00000353047 GOLGA8FQ08AF8 430 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 GOLGA8DPQ0D2H9 430 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 KIF18AQ8NI77 898 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 ZSWIM6Q9HCJ5 1215 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 MTMR7Q9Y216 660 aa21.11■□□□□ 0.97
CTSB-202ENST00000353047 CABLES1Q8TDN4 633 aa21.1■□□□□ 0.97
CTSB-202ENST00000353047 TTC14Q96N46 770 aa21.1■□□□□ 0.97
CTSB-202ENST00000353047 ZNF396Q96N95 335 aaPredicted RBP21.1■□□□□ 0.97
CTSB-202ENST00000353047 IFNKQ9P0W0 207 aa21.1■□□□□ 0.97
CTSB-202ENST00000353047 PTPRMP28827 1452 aa21.1■□□□□ 0.97
CTSB-202ENST00000353047 CPLX3Q8WVH0 158 aa21.1■□□□□ 0.97
CTSB-202ENST00000353047 GPHNQ9NQX3 736 aaPredicted RBP21.1■□□□□ 0.97
CTSB-202ENST00000353047 USP27XA6NNY8 438 aa21.09■□□□□ 0.97
CTSB-202ENST00000353047 DNAI1Q9UI46 699 aa21.09■□□□□ 0.97
CTSB-202ENST00000353047 CPS1P31327 1500 aa21.09■□□□□ 0.97
CTSB-202ENST00000353047 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
CTSB-202ENST00000353047 CCDC144BQ3MJ40 725 aa21.09■□□□□ 0.97
CTSB-202ENST00000353047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.09■□□□□ 0.97
CTSB-202ENST00000353047 TRDNQ13061 729 aa21.09■□□□□ 0.97
CTSB-202ENST00000353047 C8orf76Q96K31 380 aa21.09■□□□□ 0.97
CTSB-202ENST00000353047 USP28Q96RU2 1077 aa21.08■□□□□ 0.97
CTSB-202ENST00000353047 TTC41PQ6P2S7 1318 aa21.08■□□□□ 0.97
CTSB-202ENST00000353047 GOLGA8BA8MQT2 603 aa21.08■□□□□ 0.97
CTSB-202ENST00000353047 IFIT1P09914 478 aaKnown RBP21.08■□□□□ 0.97
CTSB-202ENST00000353047 SPECC1Q5M775 1068 aa21.08■□□□□ 0.97
CTSB-202ENST00000353047 KLHL10Q6JEL2 608 aa21.08■□□□□ 0.97
CTSB-202ENST00000353047 ANO10Q9NW15 660 aa21.08■□□□□ 0.97
CTSB-202ENST00000353047 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.97
CTSB-202ENST00000353047 STX1AQ16623 288 aa21.08■□□□□ 0.96
CTSB-202ENST00000353047 KAT6BQ8WYB5 2073 aa21.08■□□□□ 0.96
CTSB-202ENST00000353047 SASH1O94885 1247 aa21.07■□□□□ 0.96
CTSB-202ENST00000353047 GTF2F1P35269 517 aaKnown RBP eCLIP21.07■□□□□ 0.96
CTSB-202ENST00000353047 TNNT3P45378 269 aaPredicted RBP21.07■□□□□ 0.96
CTSB-202ENST00000353047 SNW1Q13573 536 aaKnown RBP21.07■□□□□ 0.96
CTSB-202ENST00000353047 ANKRD24Q8TF21 1146 aa21.07■□□□□ 0.96
CTSB-202ENST00000353047 IDH1O75874 414 aaKnown RBP21.07■□□□□ 0.96
CTSB-202ENST00000353047 ANKRD13DQ6ZTN6 518 aa21.07■□□□□ 0.96
CTSB-202ENST00000353047 KRT32Q14532 448 aa21.06■□□□□ 0.96
CTSB-202ENST00000353047 MICU3Q86XE3 530 aa21.06■□□□□ 0.96
CTSB-202ENST00000353047 CLSTN2Q9H4D0 955 aa21.06■□□□□ 0.96
CTSB-202ENST00000353047 ORC3Q9UBD5 711 aaPredicted RBP21.06■□□□□ 0.96
CTSB-202ENST00000353047 LINS1Q8NG48 757 aa21.06■□□□□ 0.96
CTSB-202ENST00000353047 AATKQ6ZMQ8 1374 aa21.06■□□□□ 0.96
CTSB-202ENST00000353047 TEX35Q5T0J7 233 aa21.06■□□□□ 0.96
CTSB-202ENST00000353047 PGBD1Q96JS3 809 aa21.05■□□□□ 0.96
CTSB-202ENST00000353047 VGLL3A8MV65 326 aa21.05■□□□□ 0.96
CTSB-202ENST00000353047 UBXN4Q92575 508 aa21.05■□□□□ 0.96
CTSB-202ENST00000353047 SLC3A2P08195 630 aaKnown RBP21.05■□□□□ 0.96
CTSB-202ENST00000353047 DDX17Q92841 729 aaKnown RBP21.05■□□□□ 0.96
CTSB-202ENST00000353047 NRXN1Q9ULB1 1477 aa21.05■□□□□ 0.96
CTSB-202ENST00000353047 TRIM29Q14134 588 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 TTC39AQ5SRH9 613 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 KLF18A0A0U1RQI7 1052 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 NECTIN1Q15223 517 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 MYO3AQ8NEV4 1616 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 SBNO1A3KN83 1393 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 CABP4P57796 275 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 ERCC6LQ2NKX8 1250 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 EPHA10Q5JZY3 1008 aa21.04■□□□□ 0.96
CTSB-202ENST00000353047 CDK12Q9NYV4 1490 aaPredicted RBP21.03■□□□□ 0.96
CTSB-202ENST00000353047 RNF216Q9NWF9 866 aaPredicted RBP21.03■□□□□ 0.96
CTSB-202ENST00000353047 SMTNL1A8MU46 457 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 ZBTB22O15209 634 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 ORAI2Q96SN7 254 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 MCMDC2Q4G0Z9 681 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 RASSF8Q8NHQ8 419 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 NUP133Q8WUM0 1156 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 MAP4K1Q92918 833 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 ST7Q9NRC1 585 aa21.03■□□□□ 0.96
CTSB-202ENST00000353047 CYP21A2P08686 494 aa21.02■□□□□ 0.96
CTSB-202ENST00000353047 SCRN1Q12765 414 aa21.02■□□□□ 0.96
CTSB-202ENST00000353047 A0A0G2JLW4 131 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms