RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SKIDA1Q1XH10 827 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 CARD6Q9BX69 1037 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 ADGRB3O60242 1522 aa8.93□□□□□ -0.98
BRCA1-201ENST00000352993 SALL3Q9BXA9 1300 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 CDC25BP30305 580 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 WAPLQ7Z5K2 1190 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 PGBD1Q96JS3 809 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 NAT10Q9H0A0 1025 aaKnown RBP8.92□□□□□ -0.98
BRCA1-201ENST00000352993 ANO10Q9NW15 660 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 TMEM131LA2VDJ0 1609 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 ELP1O95163 1332 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 SETBP1Q9Y6X0 1596 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 MYO1CO00159 1063 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 CAVIN2O95810 425 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 PSMA5P28066 241 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 PPP1R13BQ96KQ4 1090 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 RBM8AQ9Y5S9 174 aaKnown RBP8.92□□□□□ -0.98
BRCA1-201ENST00000352993 H2AFXP16104 143 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-201ENST00000352993 ME1P48163 572 aa8.92□□□□□ -0.98
BRCA1-201ENST00000352993 BIN1O00499 593 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 FOXO3O43524 673 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 SMC1AQ14683 1233 aaKnown RBP8.91□□□□□ -0.98
BRCA1-201ENST00000352993 LEKR1Q6ZMV7 388 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 IFNKQ9P0W0 207 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 CFAP45Q9UL16 551 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 KIAA0232Q92628 1395 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 XRN1Q8IZH2 1706 aaKnown RBP8.91□□□□□ -0.98
BRCA1-201ENST00000352993 IFIT2P09913 472 aaKnown RBP8.91□□□□□ -0.98
BRCA1-201ENST00000352993 EVCP57679 992 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 IQCB1Q15051 598 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 BRF1Q92994 677 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 SOS1Q07889 1333 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-201ENST00000352993 ADGRB1O14514 1584 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 JAK2O60674 1132 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 NOM1Q5C9Z4 860 aaKnown RBP8.91□□□□□ -0.98
BRCA1-201ENST00000352993 CCDC30Q5VVM6 783 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 KLHL34Q8N239 644 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 GPATCH11Q8N954 259 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 ZSWIM4Q9H7M6 989 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 ZSWIM6Q9HCJ5 1215 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 LCMT1Q9UIC8 334 aa8.91□□□□□ -0.98
BRCA1-201ENST00000352993 NRXN1Q9ULB1 1477 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 YTHDC2Q9H6S0 1430 aaKnown RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 GLRX3O76003 335 aaKnown RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 ST3GAL1Q11201 340 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 SF3A1Q15459 793 aaKnown RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 E4F1Q66K89 784 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 CREB3L3Q68CJ9 461 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 ISM2Q6H9L7 571 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 CLASRPQ8N2M8 674 aaKnown RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 FAM53CQ9NYF3 392 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 ORC3Q9UBD5 711 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 EPB41L2O43491 1005 aaKnown RBP8.9□□□□□ -0.98
BRCA1-201ENST00000352993 FSIP1Q8NA03 581 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 PI4K2BQ8TCG2 481 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 GPATCH3Q96I76 525 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 SIL1Q9H173 461 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 EFCC1Q9HA90 598 aa8.9□□□□□ -0.98
BRCA1-201ENST00000352993 NRXN3Q9Y4C0 1643 aa8.9□□□□□ -0.99
BRCA1-201ENST00000352993 CASQ1P31415 396 aa8.9□□□□□ -0.99
BRCA1-201ENST00000352993 GUCY1B3Q02153 619 aa8.9□□□□□ -0.99
BRCA1-201ENST00000352993 SARM1Q6SZW1 724 aa8.9□□□□□ -0.99
BRCA1-201ENST00000352993 FTOQ9C0B1 505 aaKnown RBP eCLIP8.9□□□□□ -0.99
BRCA1-201ENST00000352993 XPO4Q9C0E2 1151 aaKnown RBP8.9□□□□□ -0.99
BRCA1-201ENST00000352993 ARFGAP3Q9NP61 516 aa8.9□□□□□ -0.99
BRCA1-201ENST00000352993 TTC21AQ8NDW8 1320 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 NHSL1Q5SYE7 1610 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 NUTM2FA1L443 756 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 CTAGE5O15320 804 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 IDI1Q13907 227 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 ANKRD1Q15327 319 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 ERBB3P21860 1342 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 DHX16O60231 1041 aaKnown RBP8.89□□□□□ -0.99
BRCA1-201ENST00000352993 ETF1P62495 437 aaKnown RBP8.89□□□□□ -0.99
BRCA1-201ENST00000352993 MCM6Q14566 821 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 CCDC150Q8NCX0 1101 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 RRP15Q9Y3B9 282 aaKnown RBP8.89□□□□□ -0.99
BRCA1-201ENST00000352993 AOX1Q06278 1338 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 LMOD1P29536 600 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-201ENST00000352993 EIF4A2Q14240 407 aaKnown RBP8.89□□□□□ -0.99
BRCA1-201ENST00000352993 FAM227BQ96M60 508 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 USP44Q9H0E7 712 aa8.89□□□□□ -0.99
BRCA1-201ENST00000352993 PDILTQ8N807 584 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 FSD1Q9BTV5 496 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 UTP14AQ9BVJ6 771 aaKnown RBP8.88□□□□□ -0.99
BRCA1-201ENST00000352993 LRRC2Q9BYS8 371 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 L2HGDHQ9H9P8 463 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 VPS18Q9P253 973 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 NCKAP5LQ9HCH0 1330 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 ANKRD65E5RJM6 399 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 TPM1P09493 284 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 PTPN21Q16825 1174 aa8.88□□□□□ -0.99
BRCA1-201ENST00000352993 AHDC1Q5TGY3 1603 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-201ENST00000352993 CPSF1Q10570 1443 aaKnown RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 SERPINC1P01008 464 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 GNG11P61952 73 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 COL9A3Q14050 684 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 DHX40Q8IX18 779 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms