RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 BBOX1O75936 387 aa26.58■■□□□ 1.85
MRPL39-202ENST00000352957 PSMD1Q99460 953 aa26.58■■□□□ 1.85
MRPL39-202ENST00000352957 LRRC37AA6NMS7 1700 aa26.58■■□□□ 1.85
MRPL39-202ENST00000352957 HSP90B1P14625 803 aaKnown RBP26.56■■□□□ 1.84
MRPL39-202ENST00000352957 IARSP41252 1262 aaKnown RBP26.56■■□□□ 1.84
MRPL39-202ENST00000352957 GRIPAP1Q4V328 841 aa26.56■■□□□ 1.84
MRPL39-202ENST00000352957 CDHR2Q9BYE9 1310 aa26.56■■□□□ 1.84
MRPL39-202ENST00000352957 F6X3S4 739 aa26.55■■□□□ 1.84
MRPL39-202ENST00000352957 PDE8AO60658 829 aa26.55■■□□□ 1.84
MRPL39-202ENST00000352957 SP8Q8IXZ3 490 aa26.55■■□□□ 1.84
MRPL39-202ENST00000352957 TMX4Q9H1E5 349 aaPredicted RBP26.55■■□□□ 1.84
MRPL39-202ENST00000352957 RRAGCQ9HB90 399 aa26.55■■□□□ 1.84
MRPL39-202ENST00000352957 TRMT2AQ8IZ69 625 aaKnown RBP26.54■■□□□ 1.84
MRPL39-202ENST00000352957 CELF1Q92879 486 aaKnown RBP26.54■■□□□ 1.84
MRPL39-202ENST00000352957 WDR90Q96KV7 1748 aa26.53■■□□□ 1.84
MRPL39-202ENST00000352957 GCKRQ14397 625 aa26.53■■□□□ 1.84
MRPL39-202ENST00000352957 DPY19L2Q6NUT2 758 aa26.53■■□□□ 1.84
MRPL39-202ENST00000352957 LINS1Q8NG48 757 aa26.53■■□□□ 1.84
MRPL39-202ENST00000352957 COL4A5P29400 1685 aa26.53■■□□□ 1.84
MRPL39-202ENST00000352957 UBE3BQ7Z3V4 1068 aa26.52■■□□□ 1.84
MRPL39-202ENST00000352957 H7C1W4 665 aa26.51■■□□□ 1.83
MRPL39-202ENST00000352957 CCDC152Q4G0S7 254 aa26.51■■□□□ 1.83
MRPL39-202ENST00000352957 TMC4Q7Z404 712 aa26.51■■□□□ 1.83
MRPL39-202ENST00000352957 CCDC85AQ96PX6 553 aaPredicted RBP26.51■■□□□ 1.83
MRPL39-202ENST00000352957 SEC31BQ9NQW1 1179 aa26.51■■□□□ 1.83
MRPL39-202ENST00000352957 MRPL50Q8N5N7 158 aaKnown RBP26.5■■□□□ 1.83
MRPL39-202ENST00000352957 SPEF2Q9C093 1822 aa26.5■■□□□ 1.83
MRPL39-202ENST00000352957 CTSWP56202 376 aa26.49■■□□□ 1.83
MRPL39-202ENST00000352957 BEND3Q5T5X7 828 aa26.49■■□□□ 1.83
MRPL39-202ENST00000352957 DPP8Q6V1X1 898 aaPredicted RBP26.49■■□□□ 1.83
MRPL39-202ENST00000352957 MPNDQ8N594 471 aa26.49■■□□□ 1.83
MRPL39-202ENST00000352957 SSH1Q8WYL5 1049 aa26.49■■□□□ 1.83
MRPL39-202ENST00000352957 DUOX1Q9NRD9 1551 aa26.49■■□□□ 1.83
MRPL39-202ENST00000352957 ZNF541Q9H0D2 1346 aa26.48■■□□□ 1.83
MRPL39-202ENST00000352957 DDNO94850 711 aaPredicted RBP26.48■■□□□ 1.83
MRPL39-202ENST00000352957 RPS8P62241 208 aaKnown RBP26.48■■□□□ 1.83
MRPL39-202ENST00000352957 RTFDC1Q9BY42 306 aaPredicted RBP26.48■■□□□ 1.83
MRPL39-202ENST00000352957 TOMM70O94826 608 aa26.47■■□□□ 1.83
MRPL39-202ENST00000352957 CASP7P55210 303 aa26.47■■□□□ 1.83
MRPL39-202ENST00000352957 C16orf71Q8IYS4 520 aaPredicted RBP26.47■■□□□ 1.83
MRPL39-202ENST00000352957 LARGE2Q8N3Y3 721 aa26.47■■□□□ 1.83
MRPL39-202ENST00000352957 JDP2Q8WYK2 163 aa26.47■■□□□ 1.83
MRPL39-202ENST00000352957 BCL2L13Q9BXK5 485 aa26.47■■□□□ 1.83
MRPL39-202ENST00000352957 LTBP1Q14766 1721 aa26.47■■□□□ 1.83
MRPL39-202ENST00000352957 FZD9O00144 591 aa26.46■■□□□ 1.83
MRPL39-202ENST00000352957 SUPT20HQ8NEM7 779 aa26.46■■□□□ 1.83
MRPL39-202ENST00000352957 TTLL11Q8NHH1 800 aa26.46■■□□□ 1.83
MRPL39-202ENST00000352957 POTECB2RU33 542 aa26.45■■□□□ 1.82
MRPL39-202ENST00000352957 PPIP5K2O43314 1243 aa26.45■■□□□ 1.82
MRPL39-202ENST00000352957 VEGFAP15692 232 aaPredicted RBP26.45■■□□□ 1.82
MRPL39-202ENST00000352957 AOC3Q16853 763 aa26.45■■□□□ 1.82
MRPL39-202ENST00000352957 SLC4A10Q6U841 1118 aa26.45■■□□□ 1.82
MRPL39-202ENST00000352957 HNRNPUQ00839 825 aaKnown RBP eCLIP26.43■■□□□ 1.82
MRPL39-202ENST00000352957 ALDH1L2Q3SY69 923 aa26.43■■□□□ 1.82
MRPL39-202ENST00000352957 PLA2G12BQ9BX93 195 aa26.43■■□□□ 1.82
MRPL39-202ENST00000352957 VPS33BQ9H267 617 aa26.43■■□□□ 1.82
MRPL39-202ENST00000352957 GREM2Q9H772 168 aa26.43■■□□□ 1.82
MRPL39-202ENST00000352957 NSFL1CQ9UNZ2 370 aaKnown RBP26.43■■□□□ 1.82
MRPL39-202ENST00000352957 SCN4AP35499 1836 aa26.43■■□□□ 1.82
MRPL39-202ENST00000352957 GPSM2P81274 684 aa26.42■■□□□ 1.82
MRPL39-202ENST00000352957 NIM1KQ8IY84 436 aa26.42■■□□□ 1.82
MRPL39-202ENST00000352957 RTL9Q8NET4 1388 aa26.42■■□□□ 1.82
MRPL39-202ENST00000352957 PTPRCP08575 1304 aa26.41■■□□□ 1.82
MRPL39-202ENST00000352957 CT47B1P0C2W7 299 aaPredicted RBP26.41■■□□□ 1.82
MRPL39-202ENST00000352957 ANKRD18AQ8IVF6 992 aa26.41■■□□□ 1.82
MRPL39-202ENST00000352957 RBM46Q8TBY0 533 aaKnown RBP26.41■■□□□ 1.82
MRPL39-202ENST00000352957 SMC4Q9NTJ3 1288 aa26.41■■□□□ 1.82
MRPL39-202ENST00000352957 ALDH1L1O75891 902 aa26.4■■□□□ 1.82
MRPL39-202ENST00000352957 EIF6P56537 245 aaKnown RBP26.4■■□□□ 1.82
MRPL39-202ENST00000352957 KIAA2012Q0VF49 1180 aa26.4■■□□□ 1.82
MRPL39-202ENST00000352957 SRCIN1Q9C0H9 1055 aa26.4■■□□□ 1.82
MRPL39-202ENST00000352957 L3MBTL3Q96JM7 780 aaPredicted RBP26.39■■□□□ 1.82
MRPL39-202ENST00000352957 CDC5LQ99459 802 aaKnown RBP26.39■■□□□ 1.82
MRPL39-202ENST00000352957 GRM8O00222 908 aa26.38■■□□□ 1.81
MRPL39-202ENST00000352957 GPC2Q8N158 579 aa26.38■■□□□ 1.81
MRPL39-202ENST00000352957 POLLQ9UGP5 575 aa26.38■■□□□ 1.81
MRPL39-202ENST00000352957 C6orf229H3BNL8 230 aa26.37■■□□□ 1.81
MRPL39-202ENST00000352957 CSF1RP07333 972 aa26.37■■□□□ 1.81
MRPL39-202ENST00000352957 FAM161AQ3B820 660 aa26.37■■□□□ 1.81
MRPL39-202ENST00000352957 C9orf78Q9NZ63 289 aaPredicted RBP26.37■■□□□ 1.81
MRPL39-202ENST00000352957 GJA3Q9Y6H8 435 aa26.37■■□□□ 1.81
MRPL39-202ENST00000352957 FOXO4P98177 505 aa26.36■■□□□ 1.81
MRPL39-202ENST00000352957 WASHC4Q2M389 1173 aa26.36■■□□□ 1.81
MRPL39-202ENST00000352957 PODXL2Q9NZ53 605 aa26.36■■□□□ 1.81
MRPL39-202ENST00000352957 ZNRF3Q9ULT6 936 aa26.36■■□□□ 1.81
MRPL39-202ENST00000352957 ITGA6P23229 1130 aa26.35■■□□□ 1.81
MRPL39-202ENST00000352957 TBC1D16Q8TBP0 767 aa26.35■■□□□ 1.81
MRPL39-202ENST00000352957 GPR101Q96P66 508 aaPredicted RBP26.35■■□□□ 1.81
MRPL39-202ENST00000352957 ANKIB1Q9P2G1 1089 aa26.35■■□□□ 1.81
MRPL39-202ENST00000352957 IQCA1LA6NCM1 817 aa26.34■■□□□ 1.81
MRPL39-202ENST00000352957 HSPA6P17066 643 aa26.34■■□□□ 1.81
MRPL39-202ENST00000352957 RIMBP2O15034 1052 aa26.33■■□□□ 1.81
MRPL39-202ENST00000352957 UFL1O94874 794 aa26.33■■□□□ 1.81
MRPL39-202ENST00000352957 FSTL1Q12841 308 aa26.33■■□□□ 1.81
MRPL39-202ENST00000352957 EPHA10Q5JZY3 1008 aa26.33■■□□□ 1.81
MRPL39-202ENST00000352957 EYA3Q99504 573 aa26.33■■□□□ 1.81
MRPL39-202ENST00000352957 BSDC1Q9NW68 430 aaPredicted RBP26.33■■□□□ 1.81
MRPL39-202ENST00000352957 IGHMBP2P38935 993 aaKnown RBP26.32■■□□□ 1.8
MRPL39-202ENST00000352957 RARSP54136 660 aaKnown RBP26.32■■□□□ 1.8
MRPL39-202ENST00000352957 CXCL9Q07325 125 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms