RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 ATP6V1DQ9Y5K8 247 aa17.36■□□□□ 0.37
ARHGEF1-202ENST00000347545 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 UVSSAQ2YD98 709 aa17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 RABL6Q3YEC7 729 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 TNNI3KQ59H18 835 aa17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 ALDH8A1Q9H2A2 487 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 FPGT-TNNI3KV9GXZ4 949 aa17.35■□□□□ 0.37
ARHGEF1-202ENST00000347545 CASP7P55210 303 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 USPL1Q5W0Q7 1092 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 FAM184AQ8NB25 1140 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 ATP5JP18859 108 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 TSGA10IPQ3SY00 556 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 FAM173BQ6P4H8 233 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 TTC6Q86TZ1 520 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 MYH15Q9Y2K3 1946 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 R3HCC1Q9Y3T6 440 aaKnown RBP17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 PSMA5P28066 241 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 UBE3BQ7Z3V4 1068 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 MPNDQ8N594 471 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 ARID3AQ99856 593 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
ARHGEF1-202ENST00000347545 AP5Z1O43299 807 aa17.33■□□□□ 0.37
ARHGEF1-202ENST00000347545 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.37
ARHGEF1-202ENST00000347545 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.37
ARHGEF1-202ENST00000347545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.37
ARHGEF1-202ENST00000347545 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
ARHGEF1-202ENST00000347545 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.36
ARHGEF1-202ENST00000347545 LETM1O95202 739 aaPredicted RBP17.33■□□□□ 0.36
ARHGEF1-202ENST00000347545 RBM10P98175 930 aaKnown RBP17.33■□□□□ 0.36
ARHGEF1-202ENST00000347545 FERMT3Q86UX7 667 aa17.33■□□□□ 0.36
ARHGEF1-202ENST00000347545 LARP1BQ659C4 914 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-202ENST00000347545 CCDC129Q6ZRS4 1044 aa17.32■□□□□ 0.36
ARHGEF1-202ENST00000347545 TERF1P54274 439 aa17.32■□□□□ 0.36
ARHGEF1-202ENST00000347545 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
ARHGEF1-202ENST00000347545 SEC62Q99442 399 aaKnown RBP17.32■□□□□ 0.36
ARHGEF1-202ENST00000347545 ADCY5O95622 1261 aa17.32■□□□□ 0.36
ARHGEF1-202ENST00000347545 DBNDD2Q9BQY9 259 aa17.32■□□□□ 0.36
ARHGEF1-202ENST00000347545 DCAF5Q96JK2 942 aa17.31■□□□□ 0.36
ARHGEF1-202ENST00000347545 RNF20Q5VTR2 975 aa17.31■□□□□ 0.36
ARHGEF1-202ENST00000347545 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF1-202ENST00000347545 HMG20BQ9P0W2 317 aa17.3■□□□□ 0.36
ARHGEF1-202ENST00000347545 PAPPAQ13219 1627 aa17.3■□□□□ 0.36
ARHGEF1-202ENST00000347545 STK3Q13188 491 aa17.3■□□□□ 0.36
ARHGEF1-202ENST00000347545 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
ARHGEF1-202ENST00000347545 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 LIG1P18858 919 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 RFX7Q2KHR2 1363 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 HAUS7Q99871 368 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 A0A087WZG4 1122 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 NBPF26B4DH59 902 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 KDM4AO75164 1064 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 FOXO4P98177 505 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 NBPF14Q5TI25 921 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 NBPF10Q6P3W6 841 aaKnown RBP17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 NBPF15Q8N660 670 aa17.29■□□□□ 0.36
ARHGEF1-202ENST00000347545 ELP1O95163 1332 aa17.28■□□□□ 0.36
ARHGEF1-202ENST00000347545 JAK2O60674 1132 aa17.28■□□□□ 0.36
ARHGEF1-202ENST00000347545 SLFNL1Q499Z3 407 aa17.28■□□□□ 0.36
ARHGEF1-202ENST00000347545 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
ARHGEF1-202ENST00000347545 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
ARHGEF1-202ENST00000347545 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
ARHGEF1-202ENST00000347545 CSB-PGBD3P0DP91 1061 aa17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 STOX1Q6ZVD7 989 aa17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 TMEM94Q12767 1356 aa17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 CYP21A2P08686 494 aa17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 KRT85P78386 507 aa17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 PLBD2Q8NHP8 589 aa17.27■□□□□ 0.36
ARHGEF1-202ENST00000347545 KCPQ6ZWJ8 1503 aa17.27■□□□□ 0.35
ARHGEF1-202ENST00000347545 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.35
ARHGEF1-202ENST00000347545 ATG9AQ7Z3C6 839 aa17.27■□□□□ 0.35
ARHGEF1-202ENST00000347545 GTF3C6Q969F1 213 aa17.27■□□□□ 0.35
ARHGEF1-202ENST00000347545 TTC12Q9H892 705 aaPredicted RBP17.27■□□□□ 0.35
ARHGEF1-202ENST00000347545 KIAA2012Q0VF49 1180 aa17.26■□□□□ 0.35
ARHGEF1-202ENST00000347545 KLHL34Q8N239 644 aa17.26■□□□□ 0.35
ARHGEF1-202ENST00000347545 C17orf53Q8N3J3 647 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF1-202ENST00000347545 TFIP11Q9UBB9 837 aaKnown RBP17.26■□□□□ 0.35
ARHGEF1-202ENST00000347545 PDCP20941 246 aa17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 NEK1Q96PY6 1258 aa17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 H7C1W4 665 aa17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 CABP4P57796 275 aa17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 Q6ZUG5 572 aa17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
ARHGEF1-202ENST00000347545 A0A0G2JLW4 131 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 MCMDC2Q4G0Z9 681 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 TTLL7Q6ZT98 887 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 PALLDQ8WX93 1383 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
ARHGEF1-202ENST00000347545 UQCRHLA0A096LP55 91 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms