RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PI4K2BQ8TCG2 481 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 RRAGDQ9NQL2 400 aaPredicted RBP15.78■□□□□ 0.12
CASC4-202ENST00000345795 PAG1Q9NWQ8 432 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
CASC4-202ENST00000345795 ATP6V1DQ9Y5K8 247 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 ADGRL3Q9HAR2 1447 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
CASC4-202ENST00000345795 MYL10Q9BUA6 226 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 GPHNQ9NQX3 736 aaPredicted RBP15.78■□□□□ 0.12
CASC4-202ENST00000345795 CCDC171Q6TFL3 1326 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 USP31Q70CQ4 1352 aa15.78■□□□□ 0.12
CASC4-202ENST00000345795 UBAP1LF5GYI3 381 aa15.77■□□□□ 0.12
CASC4-202ENST00000345795 IRS4O14654 1257 aaPredicted RBP15.77■□□□□ 0.12
CASC4-202ENST00000345795 RBM10P98175 930 aaKnown RBP15.77■□□□□ 0.12
CASC4-202ENST00000345795 SLC9C2Q5TAH2 1124 aa15.77■□□□□ 0.12
CASC4-202ENST00000345795 ZNF592Q92610 1267 aa15.77■□□□□ 0.12
CASC4-202ENST00000345795 SPATA32Q96LK8 384 aa15.77■□□□□ 0.12
CASC4-202ENST00000345795 NEK1Q96PY6 1258 aa15.77■□□□□ 0.12
CASC4-202ENST00000345795 HSP90AA4PQ58FG1 418 aa15.77■□□□□ 0.11
CASC4-202ENST00000345795 NBPF26B4DH59 902 aa15.77■□□□□ 0.11
CASC4-202ENST00000345795 HLFQ16534 295 aa15.77■□□□□ 0.11
CASC4-202ENST00000345795 NBPF14Q5TI25 921 aa15.77■□□□□ 0.11
CASC4-202ENST00000345795 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.11
CASC4-202ENST00000345795 NBPF15Q8N660 670 aa15.77■□□□□ 0.11
CASC4-202ENST00000345795 SDF4Q9BRK5 362 aa15.77■□□□□ 0.11
CASC4-202ENST00000345795 ATP10DQ9P241 1426 aa15.77■□□□□ 0.11
CASC4-202ENST00000345795 TDO2P48775 406 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 RUFY3Q7L099 469 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 BIN1O00499 593 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 ATP2B3Q16720 1220 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
CASC4-202ENST00000345795 AIDAQ96BJ3 306 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 TMEM63CQ9P1W3 806 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 SHPRHQ149N8 1683 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 A0A0G2JLW4 131 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 ITGA6P23229 1130 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 ME3Q16798 604 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 PIGBQ92521 554 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 TSPY26PQ9H489 355 aa15.76■□□□□ 0.11
CASC4-202ENST00000345795 ESPNB1AK53 854 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 SLC27A2O14975 620 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 PLBD2Q8NHP8 589 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 BECN2A8MW95 431 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 ZAP70P43403 619 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 RBSNQ9H1K0 784 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 SPATA31D1Q6ZQQ2 1576 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 PCDH11XQ9BZA7 1347 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 PCDH11YQ9BZA8 1340 aa15.75■□□□□ 0.11
CASC4-202ENST00000345795 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 FAM43AQ8N2R8 423 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 GREM2Q9H772 168 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 FAM13BQ9NYF5 915 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 TPCN1Q9ULQ1 816 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 RAD50Q92878 1312 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 RIMS1Q86UR5 1692 aaKnown RBP15.74■□□□□ 0.11
CASC4-202ENST00000345795 hCG_1642624A0A1W2PR95 340 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 HIP1O00291 1037 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 KRT85P78386 507 aa15.74■□□□□ 0.11
CASC4-202ENST00000345795 CMTR1Q8N1G2 835 aaKnown RBP15.74■□□□□ 0.11
CASC4-202ENST00000345795 GOLGA8BA8MQT2 603 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 PTPN12Q05209 780 aaKnown RBP15.73■□□□□ 0.11
CASC4-202ENST00000345795 KIAA2012Q0VF49 1180 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 KLHL40Q2TBA0 621 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 CDC37L1Q7L3B6 337 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 C17orf53Q8N3J3 647 aaPredicted RBP15.73■□□□□ 0.11
CASC4-202ENST00000345795 RASSF8Q8NHQ8 419 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 GPT2Q8TD30 523 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 FTOQ9C0B1 505 aaKnown RBP eCLIP15.73■□□□□ 0.11
CASC4-202ENST00000345795 GJB4Q9NTQ9 266 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 MED14O60244 1454 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 DIP2AQ14689 1571 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 PRDM1O75626 825 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 HSPA4P34932 840 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 INCENPQ9NQS7 918 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 XAGE2Q96GT9 111 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
CASC4-202ENST00000345795 G3V3G9 751 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 KCNQ2O43526 872 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 DHX16O60231 1041 aaKnown RBP15.72■□□□□ 0.11
CASC4-202ENST00000345795 ZSCAN22P10073 491 aaPredicted RBP15.72■□□□□ 0.11
CASC4-202ENST00000345795 PTMSP20962 102 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 DCAF8Q5TAQ9 597 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 LMBRD1Q9NUN5 540 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 MCMDC2Q4G0Z9 681 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 LSG1Q9H089 658 aaKnown RBP15.72■□□□□ 0.11
CASC4-202ENST00000345795 PXDNQ92626 1479 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 KAZALD1Q96I82 304 aa15.72■□□□□ 0.11
CASC4-202ENST00000345795 KDRP35968 1356 aa15.71■□□□□ 0.11
CASC4-202ENST00000345795 TNMDQ9H2S6 317 aa15.71■□□□□ 0.11
CASC4-202ENST00000345795 AGLP35573 1532 aa15.71■□□□□ 0.11
CASC4-202ENST00000345795 EYA2O00167 538 aa15.71■□□□□ 0.11
CASC4-202ENST00000345795 MBD3O95983 291 aa15.71■□□□□ 0.11
CASC4-202ENST00000345795 SYNE3Q6ZMZ3 975 aa15.71■□□□□ 0.11
CASC4-202ENST00000345795 TRIM5Q9C035 493 aa15.71■□□□□ 0.11
CASC4-202ENST00000345795 ZNF213O14771 459 aa15.71■□□□□ 0.1
CASC4-202ENST00000345795 LMTK3Q96Q04 1460 aa15.7■□□□□ 0.1
CASC4-202ENST00000345795 KLF18A0A0U1RQI7 1052 aa15.7■□□□□ 0.1
CASC4-202ENST00000345795 SASS6Q6UVJ0 657 aa15.7■□□□□ 0.1
CASC4-202ENST00000345795 ZBTB9Q96C00 473 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms