RNA–Protein interactions for RNA: ENST00000345094.7

THUMPD3-201, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THUMPD3, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-201ENST00000345094 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 PCMTD1Q96MG8 357 aaPredicted RBP12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 KCNF1Q9H3M0 494 aa12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 IFIT1P09914 478 aaKnown RBP12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 HSP90B2PQ58FF3 399 aa12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 TTC39AQ5SRH9 613 aa12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 ZNF397Q8NF99 534 aaPredicted RBP12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 ZBTB22O15209 634 aa12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 FEZ1Q99689 392 aa12.43□□□□□ -0.42
THUMPD3-201ENST00000345094 FAM193AP78312 1265 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 NUP133Q8WUM0 1156 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 UTP14AQ9BVJ6 771 aaKnown RBP12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 TTC41PQ6P2S7 1318 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 IDH1O75874 414 aaKnown RBP12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 UBASH3AP57075 661 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 TIMM10P62072 90 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 TFCP2Q12800 502 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 SAFBQ15424 915 aaKnown RBP eCLIP12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 MICU3Q86XE3 530 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 EDC4Q6P2E9 1401 aaKnown RBP12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 CTAGE5O15320 804 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 KIF20AO95235 890 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 TPM1P09493 284 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 C11orf57Q6ZUT1 292 aaPredicted RBP12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 SUCLG2Q96I99 432 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
THUMPD3-201ENST00000345094 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 LMAN1P49257 510 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 MCM6Q14566 821 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 KARSQ15046 597 aaKnown RBP12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 MRPS27Q92552 414 aaKnown RBP12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 STAP2Q9UGK3 403 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 KLF18A0A0U1RQI7 1052 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 GOLGA8FQ08AF8 430 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 GOLGA8DPQ0D2H9 430 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 ZNF589Q86UQ0 364 aaPredicted RBP12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 DBNDD2Q9BQY9 259 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 ZSWIM6Q9HCJ5 1215 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 PROSER3Q2NL68 480 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 USP28Q96RU2 1077 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 KIF1BO60333 1816 aa12.41□□□□□ -0.42
THUMPD3-201ENST00000345094 PLXNC1O60486 1568 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 USP27XA6NNY8 438 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 AP5Z1O43299 807 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 NEMFO60524 1076 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 PHACTR2O75167 634 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 GSDMDP57764 484 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 SPECC1Q5M775 1068 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 CEP126Q9P2H0 1117 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 KIAA0232Q92628 1395 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 PDE4CQ08493 712 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 LMBR1LQ6UX01 489 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
THUMPD3-201ENST00000345094 CHGBP05060 677 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 HOXC9P31274 260 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 LRRC8AQ8IWT6 810 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 HOOK1Q9UJC3 728 aaKnown RBP12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 FLT4P35916 1363 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 KIF24Q5T7B8 1368 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 CASQ1P31415 396 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 CARD6Q9BX69 1037 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 CALCOCO1Q9P1Z2 691 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 SPHKAPQ2M3C7 1700 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 IMMTQ16891 758 aaKnown RBP12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 MCMDC2Q4G0Z9 681 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 LEKR1Q6ZMV7 388 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 PPFIBP1Q86W92 1011 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 CCDC12Q8WUD4 166 aaPredicted RBP12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 HMG20BQ9P0W2 317 aa12.39□□□□□ -0.43
THUMPD3-201ENST00000345094 LAMC1P11047 1609 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 ZFYVE16Q7Z3T8 1539 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 SYKP43405 635 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 DHX37Q8IY37 1157 aaKnown RBP12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 JMYQ8N9B5 988 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 ST7Q9NRC1 585 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 TULP4Q9NRJ4 1543 aa12.38□□□□□ -0.43
THUMPD3-201ENST00000345094 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms