RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 TMC4Q7Z404 712 aa26.14■■□□□ 1.77
KCNQ2-201ENST00000344425 CCDC146Q8IYE0 955 aa26.14■■□□□ 1.77
KCNQ2-201ENST00000344425 FMR1Q06787 632 aaKnown RBP eCLIP26.13■■□□□ 1.77
KCNQ2-201ENST00000344425 TNIP1Q15025 636 aa26.13■■□□□ 1.77
KCNQ2-201ENST00000344425 RUNDC1Q96C34 613 aa26.13■■□□□ 1.77
KCNQ2-201ENST00000344425 GMPSP49915 693 aaPredicted RBP26.12■■□□□ 1.77
KCNQ2-201ENST00000344425 WDR43Q15061 677 aaKnown RBP eCLIP26.12■■□□□ 1.77
KCNQ2-201ENST00000344425 KRT24Q2M2I5 525 aa26.12■■□□□ 1.77
KCNQ2-201ENST00000344425 CDHR2Q9BYE9 1310 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 ANKRD36CQ5JPF3 1778 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 TRAF5O00463 557 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 HOXB7P09629 217 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 HDGFL1Q5TGJ6 251 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 CST9Q5W186 159 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 PLBD2Q8NHP8 589 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 CAPNS2Q96L46 248 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 BCL2L13Q9BXK5 485 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 CHPF2Q9P2E5 772 aa26.11■■□□□ 1.77
KCNQ2-201ENST00000344425 HSPA8P11142 646 aaKnown RBP26.1■■□□□ 1.77
KCNQ2-201ENST00000344425 BEGAINQ9BUH8 593 aa26.1■■□□□ 1.77
KCNQ2-201ENST00000344425 ANKRD13DQ6ZTN6 518 aa26.09■■□□□ 1.77
KCNQ2-201ENST00000344425 DBF4Q9UBU7 674 aaPredicted RBP26.09■■□□□ 1.77
KCNQ2-201ENST00000344425 TRIM35Q9UPQ4 493 aa26.09■■□□□ 1.77
KCNQ2-201ENST00000344425 TLL2Q9Y6L7 1015 aa26.09■■□□□ 1.77
KCNQ2-201ENST00000344425 RAD17O75943 681 aa26.08■■□□□ 1.77
KCNQ2-201ENST00000344425 GPR101Q96P66 508 aaPredicted RBP26.08■■□□□ 1.77
KCNQ2-201ENST00000344425 DDX10Q13206 875 aaKnown RBP26.07■■□□□ 1.76
KCNQ2-201ENST00000344425 GRM1Q13255 1194 aa26.07■■□□□ 1.76
KCNQ2-201ENST00000344425 CYP4F22Q6NT55 531 aa26.07■■□□□ 1.76
KCNQ2-201ENST00000344425 ZC3H15Q8WU90 426 aaKnown RBP26.07■■□□□ 1.76
KCNQ2-201ENST00000344425 LAMB2P55268 1798 aa26.07■■□□□ 1.76
KCNQ2-201ENST00000344425 PGAP2Q9UHJ9 254 aa26.06■■□□□ 1.76
KCNQ2-201ENST00000344425 ISCA1Q9BUE6 129 aa26.05■■□□□ 1.76
KCNQ2-201ENST00000344425 HYPKQ9NX55 129 aa26.05■■□□□ 1.76
KCNQ2-201ENST00000344425 TRPM7Q96QT4 1865 aa26.05■■□□□ 1.76
KCNQ2-201ENST00000344425 CELF2O95319 508 aaKnown RBP26.05■■□□□ 1.76
KCNQ2-201ENST00000344425 SF3B3Q15393 1217 aaKnown RBP26.05■■□□□ 1.76
KCNQ2-201ENST00000344425 FAM89AQ96GI7 184 aa26.05■■□□□ 1.76
KCNQ2-201ENST00000344425 CFAP44Q96MT7 982 aa26.05■■□□□ 1.76
KCNQ2-201ENST00000344425 H7C1D1 291 aa26.04■■□□□ 1.76
KCNQ2-201ENST00000344425 ZNF428Q96B54 188 aa26.04■■□□□ 1.76
KCNQ2-201ENST00000344425 GLIS2Q9BZE0 524 aaPredicted RBP26.04■■□□□ 1.76
KCNQ2-201ENST00000344425 CNOT7Q9UIV1 285 aaKnown RBP26.04■■□□□ 1.76
KCNQ2-201ENST00000344425 MAP2K2P36507 400 aa26.03■■□□□ 1.76
KCNQ2-201ENST00000344425 WASHC4Q2M389 1173 aa26.03■■□□□ 1.76
KCNQ2-201ENST00000344425 CDC37L1Q7L3B6 337 aa26.03■■□□□ 1.76
KCNQ2-201ENST00000344425 SAPCD2Q86UD0 394 aa26.03■■□□□ 1.76
KCNQ2-201ENST00000344425 NSFL1CQ9UNZ2 370 aaKnown RBP26.03■■□□□ 1.76
KCNQ2-201ENST00000344425 ADAMTS8Q9UP79 889 aa26.03■■□□□ 1.76
KCNQ2-201ENST00000344425 YDJCA8MPS7 323 aa26.02■■□□□ 1.76
KCNQ2-201ENST00000344425 ATP5J2-PTCD1G3V325 749 aa26.02■■□□□ 1.76
KCNQ2-201ENST00000344425 DUSP27Q5VZP5 1158 aa26.02■■□□□ 1.76
KCNQ2-201ENST00000344425 HIRAP54198 1017 aaPredicted RBP26.01■■□□□ 1.75
KCNQ2-201ENST00000344425 CELF1Q92879 486 aaKnown RBP26.01■■□□□ 1.75
KCNQ2-201ENST00000344425 HHIPL1Q96JK4 782 aa26.01■■□□□ 1.75
KCNQ2-201ENST00000344425 TRIM28Q13263 835 aaKnown RBP26■■□□□ 1.75
KCNQ2-201ENST00000344425 DPF2Q92785 391 aa26■■□□□ 1.75
KCNQ2-201ENST00000344425 C6orf229H3BNL8 230 aa25.99■■□□□ 1.75
KCNQ2-201ENST00000344425 MICALL2Q8IY33 904 aa25.99■■□□□ 1.75
KCNQ2-201ENST00000344425 TRPM4Q8TD43 1214 aa25.99■■□□□ 1.75
KCNQ2-201ENST00000344425 THSD7BQ9C0I4 1608 aa25.99■■□□□ 1.75
KCNQ2-201ENST00000344425 IRS4O14654 1257 aaPredicted RBP25.98■■□□□ 1.75
KCNQ2-201ENST00000344425 HSP90B1P14625 803 aaKnown RBP25.98■■□□□ 1.75
KCNQ2-201ENST00000344425 EYA3Q99504 573 aa25.98■■□□□ 1.75
KCNQ2-201ENST00000344425 ZNF408Q9H9D4 720 aa25.98■■□□□ 1.75
KCNQ2-201ENST00000344425 AOC2O75106 756 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 RTL5Q5HYW3 569 aaPredicted RBP25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 RIC3Q7Z5B4 369 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 ABHD8Q96I13 439 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 DBNDD1Q9H9R9 158 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 MBIPQ9NS73 344 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 DUOX1Q9NRD9 1551 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 TAF1P21675 1872 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 PSMD14O00487 310 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 RIMBP2O15034 1052 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 GOLGA2Q08379 1002 aa25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 ZBTB12Q9Y330 459 aaPredicted RBP25.97■■□□□ 1.75
KCNQ2-201ENST00000344425 LRRC37AA6NMS7 1700 aa25.96■■□□□ 1.75
KCNQ2-201ENST00000344425 DDX60Q8IY21 1712 aaKnown RBP25.96■■□□□ 1.75
KCNQ2-201ENST00000344425 CA12O43570 354 aa25.96■■□□□ 1.75
KCNQ2-201ENST00000344425 RPS8P62241 208 aaKnown RBP25.96■■□□□ 1.75
KCNQ2-201ENST00000344425 GPSM2P81274 684 aa25.96■■□□□ 1.75
KCNQ2-201ENST00000344425 POLLQ9UGP5 575 aa25.96■■□□□ 1.75
KCNQ2-201ENST00000344425 SHTN1A0MZ66 631 aa25.95■■□□□ 1.74
KCNQ2-201ENST00000344425 RPS12P25398 132 aaKnown RBP25.95■■□□□ 1.74
KCNQ2-201ENST00000344425 CALD1Q05682 793 aaKnown RBP25.95■■□□□ 1.74
KCNQ2-201ENST00000344425 ZBTB38Q8NAP3 1195 aaPredicted RBP25.95■■□□□ 1.74
KCNQ2-201ENST00000344425 USP48Q86UV5 1035 aa25.94■■□□□ 1.74
KCNQ2-201ENST00000344425 ECE2O60344 883 aa25.93■■□□□ 1.74
KCNQ2-201ENST00000344425 ZNF853P0CG23 659 aa25.93■■□□□ 1.74
KCNQ2-201ENST00000344425 GNAI1P63096 354 aa25.93■■□□□ 1.74
KCNQ2-201ENST00000344425 IFT57Q9NWB7 429 aa25.93■■□□□ 1.74
KCNQ2-201ENST00000344425 BRPF1P55201 1214 aaPredicted RBP25.92■■□□□ 1.74
KCNQ2-201ENST00000344425 SAMD7Q7Z3H4 446 aa25.92■■□□□ 1.74
KCNQ2-201ENST00000344425 TBC1D16Q8TBP0 767 aa25.92■■□□□ 1.74
KCNQ2-201ENST00000344425 ZC3H12CQ9C0D7 883 aaKnown RBP25.92■■□□□ 1.74
KCNQ2-201ENST00000344425 DOK7Q18PE1 504 aa25.91■■□□□ 1.74
KCNQ2-201ENST00000344425 CHMP4AQ9BY43 222 aa25.91■■□□□ 1.74
KCNQ2-201ENST00000344425 TBC1D10BQ4KMP7 808 aaPredicted RBP25.9■■□□□ 1.74
KCNQ2-201ENST00000344425 PHAXQ9H814 394 aaKnown RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms