RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 SP8Q8IXZ3 490 aa28.65■■■□□ 2.18
PBX1-201ENST00000340699 LINS1Q8NG48 757 aa28.65■■■□□ 2.18
PBX1-201ENST00000340699 GLTPD2A6NH11 291 aa28.64■■■□□ 2.18
PBX1-201ENST00000340699 TRMT2AQ8IZ69 625 aaKnown RBP28.64■■■□□ 2.18
PBX1-201ENST00000340699 IARSP41252 1262 aaKnown RBP28.63■■■□□ 2.17
PBX1-201ENST00000340699 GCKRQ14397 625 aa28.63■■■□□ 2.17
PBX1-201ENST00000340699 CCDC152Q4G0S7 254 aa28.63■■■□□ 2.17
PBX1-201ENST00000340699 F6X3S4 739 aa28.62■■■□□ 2.17
PBX1-201ENST00000340699 C1QTNF8P60827 252 aa28.62■■■□□ 2.17
PBX1-201ENST00000340699 NMRK2Q9NPI5 230 aa28.62■■■□□ 2.17
PBX1-201ENST00000340699 H7C1W4 665 aa28.61■■■□□ 2.17
PBX1-201ENST00000340699 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
PBX1-201ENST00000340699 KIF3CO14782 793 aa28.6■■■□□ 2.17
PBX1-201ENST00000340699 UBE3BQ7Z3V4 1068 aa28.6■■■□□ 2.17
PBX1-201ENST00000340699 MRPL50Q8N5N7 158 aaKnown RBP28.6■■■□□ 2.17
PBX1-201ENST00000340699 SUPT20HQ8NEM7 779 aa28.6■■■□□ 2.17
PBX1-201ENST00000340699 CELF1Q92879 486 aaKnown RBP28.6■■■□□ 2.17
PBX1-201ENST00000340699 RRAGCQ9HB90 399 aa28.6■■■□□ 2.17
PBX1-201ENST00000340699 TAF1P21675 1872 aa28.59■■■□□ 2.17
PBX1-201ENST00000340699 CT47B1P0C2W7 299 aaPredicted RBP28.59■■■□□ 2.17
PBX1-201ENST00000340699 HNRNPUQ00839 825 aaKnown RBP eCLIP28.59■■■□□ 2.17
PBX1-201ENST00000340699 DPP8Q6V1X1 898 aaPredicted RBP28.59■■■□□ 2.17
PBX1-201ENST00000340699 MPNDQ8N594 471 aa28.59■■■□□ 2.17
PBX1-201ENST00000340699 JDP2Q8WYK2 163 aa28.59■■■□□ 2.17
PBX1-201ENST00000340699 RPS8P62241 208 aaKnown RBP28.58■■■□□ 2.17
PBX1-201ENST00000340699 ALDH1L2Q3SY69 923 aa28.58■■■□□ 2.17
PBX1-201ENST00000340699 BEND3Q5T5X7 828 aa28.58■■■□□ 2.17
PBX1-201ENST00000340699 SLC4A10Q6U841 1118 aa28.58■■■□□ 2.17
PBX1-201ENST00000340699 SLC51AQ86UW1 340 aa28.58■■■□□ 2.17
PBX1-201ENST00000340699 C16orf71Q8IYS4 520 aaPredicted RBP28.58■■■□□ 2.17
PBX1-201ENST00000340699 SSH1Q8WYL5 1049 aa28.58■■■□□ 2.17
PBX1-201ENST00000340699 CTSWP56202 376 aa28.57■■■□□ 2.16
PBX1-201ENST00000340699 CCDC85AQ96PX6 553 aaPredicted RBP28.57■■■□□ 2.16
PBX1-201ENST00000340699 LARGE2Q8N3Y3 721 aa28.56■■■□□ 2.16
PBX1-201ENST00000340699 VPS33BQ9H267 617 aa28.56■■■□□ 2.16
PBX1-201ENST00000340699 SEC31BQ9NQW1 1179 aa28.56■■■□□ 2.16
PBX1-201ENST00000340699 PTPRCP08575 1304 aa28.55■■■□□ 2.16
PBX1-201ENST00000340699 VEGFAP15692 232 aaPredicted RBP28.54■■■□□ 2.16
PBX1-201ENST00000340699 TTLL11Q8NHH1 800 aa28.54■■■□□ 2.16
PBX1-201ENST00000340699 BCL2L13Q9BXK5 485 aa28.54■■■□□ 2.16
PBX1-201ENST00000340699 RTFDC1Q9BY42 306 aaPredicted RBP28.54■■■□□ 2.16
PBX1-201ENST00000340699 SMC4Q9NTJ3 1288 aa28.54■■■□□ 2.16
PBX1-201ENST00000340699 PPIP5K2O43314 1243 aa28.53■■■□□ 2.16
PBX1-201ENST00000340699 ALDH1L1O75891 902 aa28.53■■■□□ 2.16
PBX1-201ENST00000340699 SRCIN1Q9C0H9 1055 aa28.53■■■□□ 2.16
PBX1-201ENST00000340699 MYH3P11055 1940 aa28.52■■■□□ 2.16
PBX1-201ENST00000340699 TOMM70O94826 608 aa28.52■■■□□ 2.16
PBX1-201ENST00000340699 DDNO94850 711 aaPredicted RBP28.52■■■□□ 2.16
PBX1-201ENST00000340699 ANKRD18AQ8IVF6 992 aa28.52■■■□□ 2.16
PBX1-201ENST00000340699 CDC5LQ99459 802 aaKnown RBP28.52■■■□□ 2.16
PBX1-201ENST00000340699 PLA2G12BQ9BX93 195 aa28.52■■■□□ 2.16
PBX1-201ENST00000340699 NSFL1CQ9UNZ2 370 aaKnown RBP28.52■■■□□ 2.16
PBX1-201ENST00000340699 FZD9O00144 591 aa28.51■■■□□ 2.15
PBX1-201ENST00000340699 CASP7P55210 303 aa28.51■■■□□ 2.15
PBX1-201ENST00000340699 NIM1KQ8IY84 436 aa28.51■■■□□ 2.15
PBX1-201ENST00000340699 C9orf78Q9NZ63 289 aaPredicted RBP28.51■■■□□ 2.15
PBX1-201ENST00000340699 EIF6P56537 245 aaKnown RBP28.5■■■□□ 2.15
PBX1-201ENST00000340699 AOC3Q16853 763 aa28.5■■■□□ 2.15
PBX1-201ENST00000340699 GREM2Q9H772 168 aa28.49■■■□□ 2.15
PBX1-201ENST00000340699 LRRC37AA6NMS7 1700 aa28.49■■■□□ 2.15
PBX1-201ENST00000340699 GRM8O00222 908 aa28.48■■■□□ 2.15
PBX1-201ENST00000340699 WDR90Q96KV7 1748 aa28.48■■■□□ 2.15
PBX1-201ENST00000340699 ZNF541Q9H0D2 1346 aa28.47■■■□□ 2.15
PBX1-201ENST00000340699 C6orf229H3BNL8 230 aa28.47■■■□□ 2.15
PBX1-201ENST00000340699 GPSM2P81274 684 aa28.47■■■□□ 2.15
PBX1-201ENST00000340699 RTL9Q8NET4 1388 aa28.47■■■□□ 2.15
PBX1-201ENST00000340699 COL4A1P02462 1669 aa28.46■■■□□ 2.15
PBX1-201ENST00000340699 KIAA2012Q0VF49 1180 aa28.46■■■□□ 2.15
PBX1-201ENST00000340699 RBM46Q8TBY0 533 aaKnown RBP28.46■■■□□ 2.15
PBX1-201ENST00000340699 ANKIB1Q9P2G1 1089 aa28.46■■■□□ 2.15
PBX1-201ENST00000340699 CSF1RP07333 972 aa28.45■■■□□ 2.14
PBX1-201ENST00000340699 EYA3Q99504 573 aa28.45■■■□□ 2.14
PBX1-201ENST00000340699 IQCA1LA6NCM1 817 aa28.44■■■□□ 2.14
PBX1-201ENST00000340699 POTECB2RU33 542 aa28.44■■■□□ 2.14
PBX1-201ENST00000340699 IGHMBP2P38935 993 aaKnown RBP28.44■■■□□ 2.14
PBX1-201ENST00000340699 WASHC4Q2M389 1173 aa28.44■■■□□ 2.14
PBX1-201ENST00000340699 GPC2Q8N158 579 aa28.44■■■□□ 2.14
PBX1-201ENST00000340699 COL4A5P29400 1685 aa28.43■■■□□ 2.14
PBX1-201ENST00000340699 ITGA6P23229 1130 aa28.43■■■□□ 2.14
PBX1-201ENST00000340699 L3MBTL3Q96JM7 780 aaPredicted RBP28.43■■■□□ 2.14
PBX1-201ENST00000340699 BSDC1Q9NW68 430 aaPredicted RBP28.43■■■□□ 2.14
PBX1-201ENST00000340699 PODXL2Q9NZ53 605 aa28.43■■■□□ 2.14
PBX1-201ENST00000340699 POLLQ9UGP5 575 aa28.43■■■□□ 2.14
PBX1-201ENST00000340699 ZNRF3Q9ULT6 936 aa28.43■■■□□ 2.14
PBX1-201ENST00000340699 GJA3Q9Y6H8 435 aa28.43■■■□□ 2.14
PBX1-201ENST00000340699 RARSP54136 660 aaKnown RBP28.42■■■□□ 2.14
PBX1-201ENST00000340699 BRPF1P55201 1214 aaPredicted RBP28.42■■■□□ 2.14
PBX1-201ENST00000340699 FAM161AQ3B820 660 aa28.42■■■□□ 2.14
PBX1-201ENST00000340699 GGA1Q9UJY5 639 aa28.42■■■□□ 2.14
PBX1-201ENST00000340699 NOB1Q9ULX3 412 aaKnown RBP28.42■■■□□ 2.14
PBX1-201ENST00000340699 CHMP3Q9Y3E7 222 aa28.42■■■□□ 2.14
PBX1-201ENST00000340699 ANKRD18BA2A2Z9 1011 aa28.41■■■□□ 2.14
PBX1-201ENST00000340699 FOXO4P98177 505 aa28.41■■■□□ 2.14
PBX1-201ENST00000340699 TBC1D16Q8TBP0 767 aa28.41■■■□□ 2.14
PBX1-201ENST00000340699 MPHOSPH8Q99549 860 aa28.41■■■□□ 2.14
PBX1-201ENST00000340699 RIMBP2O15034 1052 aa28.4■■■□□ 2.14
PBX1-201ENST00000340699 DUOX1Q9NRD9 1551 aa28.4■■■□□ 2.14
PBX1-201ENST00000340699 XDHP47989 1333 aa28.4■■■□□ 2.14
PBX1-201ENST00000340699 ZBED9Q6R2W3 1325 aa28.4■■■□□ 2.14
PBX1-201ENST00000340699 UFL1O94874 794 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms