RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PTPRUQ92729 1446 aa19.06■□□□□ 0.64
SCARB1-202ENST00000339570 EPHA10Q5JZY3 1008 aa19.05■□□□□ 0.64
SCARB1-202ENST00000339570 NRXN3Q9Y4C0 1643 aa19.05■□□□□ 0.64
SCARB1-202ENST00000339570 A0A0G2JLW4 131 aa19.05■□□□□ 0.64
SCARB1-202ENST00000339570 USP27XA6NNY8 438 aa19.05■□□□□ 0.64
SCARB1-202ENST00000339570 ZSCAN20P17040 1043 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-202ENST00000339570 RPS6KB1P23443 525 aa19.05■□□□□ 0.64
SCARB1-202ENST00000339570 MAP4K1Q92918 833 aa19.05■□□□□ 0.64
SCARB1-202ENST00000339570 OTUD7BQ6GQQ9 843 aa19.05■□□□□ 0.64
SCARB1-202ENST00000339570 C11orf57Q6ZUT1 292 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-202ENST00000339570 ZSCAN25Q6NSZ9 544 aa19.04■□□□□ 0.64
SCARB1-202ENST00000339570 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-202ENST00000339570 PDCP20941 246 aa19.04■□□□□ 0.64
SCARB1-202ENST00000339570 ZNF75DP51815 510 aa19.04■□□□□ 0.64
SCARB1-202ENST00000339570 KSR2Q6VAB6 950 aa19.04■□□□□ 0.64
SCARB1-202ENST00000339570 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
SCARB1-202ENST00000339570 BIN1O00499 593 aa19.03■□□□□ 0.64
SCARB1-202ENST00000339570 APOBRQ0VD83 1088 aa19.03■□□□□ 0.64
SCARB1-202ENST00000339570 PTPN21Q16825 1174 aa19.03■□□□□ 0.64
SCARB1-202ENST00000339570 KAZALD1Q96I82 304 aa19.03■□□□□ 0.64
SCARB1-202ENST00000339570 NRKQ7Z2Y5 1582 aa19.03■□□□□ 0.64
SCARB1-202ENST00000339570 ZNF771Q7L3S4 317 aaPredicted RBP19.03■□□□□ 0.64
SCARB1-202ENST00000339570 TFCP2Q12800 502 aa19.02■□□□□ 0.64
SCARB1-202ENST00000339570 CCDC112Q8NEF3 446 aa19.02■□□□□ 0.64
SCARB1-202ENST00000339570 SCAND2PQ9GZW5 306 aaPredicted RBP19.02■□□□□ 0.64
SCARB1-202ENST00000339570 ZNF330Q9Y3S2 320 aaPredicted RBP19.02■□□□□ 0.64
SCARB1-202ENST00000339570 ME1P48163 572 aa19.02■□□□□ 0.64
SCARB1-202ENST00000339570 ZC3H6P61129 1189 aaKnown RBP19.02■□□□□ 0.64
SCARB1-202ENST00000339570 UBE3BQ7Z3V4 1068 aa19.02■□□□□ 0.64
SCARB1-202ENST00000339570 HSP90AB3PQ58FF7 597 aa19.02■□□□□ 0.63
SCARB1-202ENST00000339570 ERC1Q8IUD2 1116 aa19.02■□□□□ 0.63
SCARB1-202ENST00000339570 SIRT1Q96EB6 747 aa19.02■□□□□ 0.63
SCARB1-202ENST00000339570 CCDC85AQ96PX6 553 aaPredicted RBP19.02■□□□□ 0.63
SCARB1-202ENST00000339570 STK11IPQ8N1F8 1099 aa19.01■□□□□ 0.63
SCARB1-202ENST00000339570 NEK1Q96PY6 1258 aa19.01■□□□□ 0.63
SCARB1-202ENST00000339570 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
SCARB1-202ENST00000339570 GORABQ5T7V8 394 aa19.01■□□□□ 0.63
SCARB1-202ENST00000339570 CCAR1Q8IX12 1150 aaKnown RBP19.01■□□□□ 0.63
SCARB1-202ENST00000339570 XAGE3Q8WTP9 111 aa19.01■□□□□ 0.63
SCARB1-202ENST00000339570 COPS6Q7L5N1 327 aa19■□□□□ 0.63
SCARB1-202ENST00000339570 DBNDD2Q9BQY9 259 aa19■□□□□ 0.63
SCARB1-202ENST00000339570 NCBP1Q09161 790 aaKnown RBP19■□□□□ 0.63
SCARB1-202ENST00000339570 PLEKHO1Q53GL0 409 aaPredicted RBP19■□□□□ 0.63
SCARB1-202ENST00000339570 CLSTN2Q9H4D0 955 aa19■□□□□ 0.63
SCARB1-202ENST00000339570 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
SCARB1-202ENST00000339570 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
SCARB1-202ENST00000339570 RNMTO43148 476 aaKnown RBP18.99■□□□□ 0.63
SCARB1-202ENST00000339570 TM6SF1Q9BZW5 370 aa18.99■□□□□ 0.63
SCARB1-202ENST00000339570 PHF8Q9UPP1 1060 aa18.99■□□□□ 0.63
SCARB1-202ENST00000339570 POLR3DP05423 398 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-202ENST00000339570 HAND2P61296 217 aa18.99■□□□□ 0.63
SCARB1-202ENST00000339570 DMTNQ08495 405 aa18.99■□□□□ 0.63
SCARB1-202ENST00000339570 NEXNQ0ZGT2 675 aa18.99■□□□□ 0.63
SCARB1-202ENST00000339570 GPHNQ9NQX3 736 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-202ENST00000339570 GJB4Q9NTQ9 266 aa18.99■□□□□ 0.63
SCARB1-202ENST00000339570 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
SCARB1-202ENST00000339570 GOLIM4O00461 696 aa18.98■□□□□ 0.63
SCARB1-202ENST00000339570 TAF5LO75529 589 aa18.98■□□□□ 0.63
SCARB1-202ENST00000339570 SDF4Q9BRK5 362 aa18.98■□□□□ 0.63
SCARB1-202ENST00000339570 DDX19AQ9NUU7 478 aaKnown RBP18.98■□□□□ 0.63
SCARB1-202ENST00000339570 DBNLQ9UJU6 430 aaKnown RBP18.98■□□□□ 0.63
SCARB1-202ENST00000339570 IGKV5-2P06315 115 aa18.98■□□□□ 0.63
SCARB1-202ENST00000339570 SCRN1Q12765 414 aa18.98■□□□□ 0.63
SCARB1-202ENST00000339570 AOPEPQ8N6M6 819 aa18.98■□□□□ 0.63
SCARB1-202ENST00000339570 CYP21A2P08686 494 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 SKILP12757 684 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 ANKRD1Q15327 319 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 CEP135Q66GS9 1140 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 GOLPH3LQ9H4A5 285 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 SNRKQ9NRH2 765 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 XRN1Q8IZH2 1706 aaKnown RBP18.97■□□□□ 0.63
SCARB1-202ENST00000339570 A0A1B0GVL5 298 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 DDX58O95786 925 aaKnown RBP18.97■□□□□ 0.63
SCARB1-202ENST00000339570 GTF2F1P35269 517 aaKnown RBP eCLIP18.97■□□□□ 0.635e-7■■■□□ 18.9
SCARB1-202ENST00000339570 HSP90AA4PQ58FG1 418 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 CCDC73Q6ZRK6 1079 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 LINS1Q8NG48 757 aa18.97■□□□□ 0.63
SCARB1-202ENST00000339570 SPATA31D1Q6ZQQ2 1576 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 TIMM10P62072 90 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 IP6K1Q92551 441 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 USP28Q96RU2 1077 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 TMX1Q9H3N1 280 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
SCARB1-202ENST00000339570 KINO60870 393 aaKnown RBP18.96■□□□□ 0.63
SCARB1-202ENST00000339570 SMC2O95347 1197 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 TPM3P06753 285 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 ZRSR1Q15695 479 aaKnown RBP18.96■□□□□ 0.63
SCARB1-202ENST00000339570 FSIP1Q8NA03 581 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 NFATC2IPQ8NCF5 419 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 NLRP2Q9NX02 1062 aa18.96■□□□□ 0.63
SCARB1-202ENST00000339570 SF3A1Q15459 793 aaKnown RBP18.95■□□□□ 0.62
SCARB1-202ENST00000339570 AKAP4Q5JQC9 854 aa18.95■□□□□ 0.62
SCARB1-202ENST00000339570 TECPR2O15040 1411 aa18.95■□□□□ 0.62
SCARB1-202ENST00000339570 TTLL5Q6EMB2 1281 aa18.95■□□□□ 0.62
SCARB1-202ENST00000339570 GTF3C6Q969F1 213 aa18.95■□□□□ 0.62
SCARB1-202ENST00000339570 IL17RAQ96F46 866 aa18.95■□□□□ 0.62
SCARB1-202ENST00000339570 ZNF215Q9UL58 517 aaPredicted RBP18.95■□□□□ 0.62
SCARB1-202ENST00000339570 CCDC69A6NI79 296 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 HIP1O00291 1037 aa18.94■□□□□ 0.62
SCARB1-202ENST00000339570 FAM177A1Q8N128 213 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms