RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 MEIS3Q99687 375 aa15.9■□□□□ 0.14
PRIM1-201ENST00000338193 USP44Q9H0E7 712 aa15.9■□□□□ 0.14
PRIM1-201ENST00000338193 TAF1P21675 1872 aa15.9■□□□□ 0.14
PRIM1-201ENST00000338193 ALDH1L1O75891 902 aa15.89■□□□□ 0.13
PRIM1-201ENST00000338193 PCCAP05165 728 aaPredicted RBP15.89■□□□□ 0.13
PRIM1-201ENST00000338193 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
PRIM1-201ENST00000338193 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
PRIM1-201ENST00000338193 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
PRIM1-201ENST00000338193 NLGN2Q8NFZ4 835 aa15.89■□□□□ 0.13
PRIM1-201ENST00000338193 KAZALD1Q96I82 304 aa15.89■□□□□ 0.13
PRIM1-201ENST00000338193 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
PRIM1-201ENST00000338193 GOLGB1Q14789 3259 aaKnown RBP15.89■□□□□ 0.13
PRIM1-201ENST00000338193 GRM8O00222 908 aa15.88■□□□□ 0.13
PRIM1-201ENST00000338193 CHRNA5P30532 468 aa15.88■□□□□ 0.13
PRIM1-201ENST00000338193 CCT4P50991 539 aaKnown RBP15.88■□□□□ 0.13
PRIM1-201ENST00000338193 IRX6P78412 446 aaPredicted RBP15.88■□□□□ 0.13
PRIM1-201ENST00000338193 TPTE2Q6XPS3 522 aa15.88■□□□□ 0.13
PRIM1-201ENST00000338193 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
PRIM1-201ENST00000338193 FHDC1Q9C0D6 1143 aaPredicted RBP15.88■□□□□ 0.13
PRIM1-201ENST00000338193 PPP1R1BQ9UD71 204 aaPredicted RBP15.88■□□□□ 0.13
PRIM1-201ENST00000338193 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
PRIM1-201ENST00000338193 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
PRIM1-201ENST00000338193 CACNA1SQ13698 1873 aa15.88■□□□□ 0.13
PRIM1-201ENST00000338193 IRS4O14654 1257 aaPredicted RBP15.87■□□□□ 0.13
PRIM1-201ENST00000338193 FTSJ3Q8IY81 847 aaKnown RBP15.87■□□□□ 0.13
PRIM1-201ENST00000338193 NYXQ9GZU5 481 aa15.87■□□□□ 0.13
PRIM1-201ENST00000338193 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
PRIM1-201ENST00000338193 UTYO14607 1347 aa15.87■□□□□ 0.13
PRIM1-201ENST00000338193 MYH3P11055 1940 aa15.87■□□□□ 0.13
PRIM1-201ENST00000338193 KCNA3P22001 575 aa15.87■□□□□ 0.13
PRIM1-201ENST00000338193 SLC10A5Q5PT55 438 aa15.87■□□□□ 0.13
PRIM1-201ENST00000338193 ITPRIPQ8IWB1 547 aa15.87■□□□□ 0.13
PRIM1-201ENST00000338193 BRCA1P38398 1863 aaKnown RBP15.86■□□□□ 0.13
PRIM1-201ENST00000338193 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
PRIM1-201ENST00000338193 NPHP1O15259 732 aa15.86■□□□□ 0.13
PRIM1-201ENST00000338193 GTF2E1P29083 439 aaPredicted RBP15.86■□□□□ 0.13
PRIM1-201ENST00000338193 ST5P78524 1137 aa15.86■□□□□ 0.13
PRIM1-201ENST00000338193 FOXO4P98177 505 aa15.86■□□□□ 0.13
PRIM1-201ENST00000338193 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
PRIM1-201ENST00000338193 C1orf115Q9H7X2 142 aa15.86■□□□□ 0.13
PRIM1-201ENST00000338193 C9orf78Q9NZ63 289 aaPredicted RBP15.86■□□□□ 0.13
PRIM1-201ENST00000338193 CDHR2Q9BYE9 1310 aa15.86■□□□□ 0.13
PRIM1-201ENST00000338193 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
PRIM1-201ENST00000338193 ZBTB7BO15156 539 aaPredicted RBP15.85■□□□□ 0.13
PRIM1-201ENST00000338193 DPEP1P16444 411 aa15.85■□□□□ 0.13
PRIM1-201ENST00000338193 MVPQ14764 893 aaKnown RBP15.85■□□□□ 0.13
PRIM1-201ENST00000338193 CRBNQ96SW2 442 aa15.85■□□□□ 0.13
PRIM1-201ENST00000338193 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
PRIM1-201ENST00000338193 SPEF2Q9C093 1822 aa15.84■□□□□ 0.13
PRIM1-201ENST00000338193 POTEMA6NI47 508 aa15.84■□□□□ 0.13
PRIM1-201ENST00000338193 PDE3AQ14432 1141 aa15.84■□□□□ 0.13
PRIM1-201ENST00000338193 KLRG2A4D1S0 409 aaPredicted RBP15.83■□□□□ 0.12
PRIM1-201ENST00000338193 C2CD5Q86YS7 1000 aa15.83■□□□□ 0.12
PRIM1-201ENST00000338193 ANKRD44Q8N8A2 993 aa15.83■□□□□ 0.12
PRIM1-201ENST00000338193 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.83■□□□□ 0.12
PRIM1-201ENST00000338193 PHF12Q96QT6 1004 aa15.83■□□□□ 0.12
PRIM1-201ENST00000338193 SYT17Q9BSW7 474 aa15.83■□□□□ 0.12
PRIM1-201ENST00000338193 BICC1Q9H694 974 aaKnown RBP15.83■□□□□ 0.12
PRIM1-201ENST00000338193 LRRFIP2Q9Y608 721 aaKnown RBP15.83■□□□□ 0.12
PRIM1-201ENST00000338193 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
PRIM1-201ENST00000338193 PDE8AO60658 829 aa15.82■□□□□ 0.12
PRIM1-201ENST00000338193 SRGNP10124 158 aa15.82■□□□□ 0.12
PRIM1-201ENST00000338193 CTSWP56202 376 aa15.82■□□□□ 0.12
PRIM1-201ENST00000338193 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
PRIM1-201ENST00000338193 SEC31BQ9NQW1 1179 aa15.82■□□□□ 0.12
PRIM1-201ENST00000338193 CD2APQ9Y5K6 639 aa15.82■□□□□ 0.12
PRIM1-201ENST00000338193 TTLL11Q8NHH1 800 aa15.81■□□□□ 0.12
PRIM1-201ENST00000338193 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
PRIM1-201ENST00000338193 GREM2Q9H772 168 aa15.81■□□□□ 0.12
PRIM1-201ENST00000338193 UBTFL1P0CB47 393 aaPredicted RBP15.8■□□□□ 0.12
PRIM1-201ENST00000338193 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
PRIM1-201ENST00000338193 LMBR1LQ6UX01 489 aa15.8■□□□□ 0.12
PRIM1-201ENST00000338193 NLRP3Q96P20 1036 aa15.8■□□□□ 0.12
PRIM1-201ENST00000338193 CENPBP07199 599 aaPredicted RBP15.79■□□□□ 0.12
PRIM1-201ENST00000338193 CSF1RP07333 972 aa15.79■□□□□ 0.12
PRIM1-201ENST00000338193 PDE6BP35913 854 aa15.79■□□□□ 0.12
PRIM1-201ENST00000338193 SF3B3Q15393 1217 aaKnown RBP15.79■□□□□ 0.12
PRIM1-201ENST00000338193 OLFM4Q6UX06 510 aa15.79■□□□□ 0.12
PRIM1-201ENST00000338193 EXOC6Q8TAG9 804 aa15.79■□□□□ 0.12
PRIM1-201ENST00000338193 ZBTB40Q9NUA8 1239 aa15.79■□□□□ 0.12
PRIM1-201ENST00000338193 MS4A1P11836 297 aa15.78■□□□□ 0.12
PRIM1-201ENST00000338193 RABL6Q3YEC7 729 aaPredicted RBP15.78■□□□□ 0.12
PRIM1-201ENST00000338193 CELF1Q92879 486 aaKnown RBP15.78■□□□□ 0.12
PRIM1-201ENST00000338193 ZNF622Q969S3 477 aaKnown RBP eCLIP15.78■□□□□ 0.123e-6■■□□□ 11.7
PRIM1-201ENST00000338193 H0YIN7 160 aa15.77■□□□□ 0.12
PRIM1-201ENST00000338193 TGFB2P61812 414 aa15.77■□□□□ 0.12
PRIM1-201ENST00000338193 POTEGQ6S5H5 508 aa15.77■□□□□ 0.12
PRIM1-201ENST00000338193 ZNF594Q96JF6 807 aaPredicted RBP15.77■□□□□ 0.12
PRIM1-201ENST00000338193 PNMA6EA0A0J9YXQ4 647 aa15.76■□□□□ 0.11
PRIM1-201ENST00000338193 GNAI3P08754 354 aa15.76■□□□□ 0.11
PRIM1-201ENST00000338193 HOXA10P31260 410 aaPredicted RBP15.76■□□□□ 0.11
PRIM1-201ENST00000338193 PELP1Q8IZL8 1130 aaKnown RBP15.76■□□□□ 0.11
PRIM1-201ENST00000338193 KLHDC4Q8TBB5 520 aa15.76■□□□□ 0.11
PRIM1-201ENST00000338193 DDX19BQ9UMR2 479 aa15.76■□□□□ 0.11
PRIM1-201ENST00000338193 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
PRIM1-201ENST00000338193 A0A1B0GUL6 1792 aa15.76■□□□□ 0.11
PRIM1-201ENST00000338193 GNAI2P04899 355 aa15.75■□□□□ 0.11
PRIM1-201ENST00000338193 NPR1P16066 1061 aa15.75■□□□□ 0.11
PRIM1-201ENST00000338193 RFX5P48382 616 aaPredicted RBP15.75■□□□□ 0.11
PRIM1-201ENST00000338193 SIRT2Q8IXJ6 389 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms