RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 K7ELQ4 463 aaPredicted RBP11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 CCDC43Q96MW1 224 aaKnown RBP11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 CASTP20810 708 aaKnown RBP11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 NRKQ7Z2Y5 1582 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 ITGA6P23229 1130 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 PDE1AP54750 535 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 HLA-DOAP06340 250 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 ANKRD26Q9UPS8 1709 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 ALDH1B1P30837 517 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 ZNF444Q8N0Y2 327 aaPredicted RBP11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 MST1RQ04912 1400 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 PDE6BP35913 854 aa11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 BRPF1P55201 1214 aaPredicted RBP11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 PUM3Q15397 648 aaKnown RBP11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 GZF1Q9H116 711 aaPredicted RBP11.01□□□□□ -0.65
FNDC3B-201ENST00000336824 TRIM37O94972 964 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 AXIN2Q9Y2T1 843 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 USP16Q9Y5T5 823 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 SLC4A3P48751 1232 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 BICD2Q8TD16 824 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 ABCC4O15439 1325 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 PLCG2P16885 1265 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 PDE4BQ07343 736 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 FOXD4L6Q3SYB3 417 aaPredicted RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 FOXD4L3Q6VB84 417 aaPredicted RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 ZNF396Q96N95 335 aaPredicted RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 DNTTIP2Q5QJE6 756 aaKnown RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 ZBTB38Q8NAP3 1195 aaPredicted RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
FNDC3B-201ENST00000336824 MROH5Q6ZUA9 1318 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 ADAMTSL3P82987 1691 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 STK11IPQ8N1F8 1099 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 EYA2O00167 538 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 VPS72Q15906 364 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 JDP2Q8WYK2 163 aa11□□□□□ -0.65
FNDC3B-201ENST00000336824 KCNQ3O43525 872 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 TPD52L1Q16890 204 aaPredicted RBP10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 NUP133Q8WUM0 1156 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 SOGA3Q5TF21 947 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 TRMT2AQ8IZ69 625 aaKnown RBP10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 PAG1Q9NWQ8 432 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 GNAT2P19087 354 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 PA2G4Q9UQ80 394 aaKnown RBP10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 CCDC73Q6ZRK6 1079 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 NLGN1Q8N2Q7 840 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 CHD2O14647 1828 aaKnown RBP10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 CPDO75976 1380 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 PALLDQ8WX93 1383 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 TPM2P07951 284 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 HCLS1P14317 486 aaPredicted RBP10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 SUPT20HQ8NEM7 779 aa10.99□□□□□ -0.65
FNDC3B-201ENST00000336824 ZNF853P0CG23 659 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 CTSWP56202 376 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 NAA16Q6N069 864 aaPredicted RBP10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 TBC1D9Q6ZT07 1266 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 JMYQ8N9B5 988 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 SNRKQ9NRH2 765 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 DENND2AQ9ULE3 1009 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 WDHD1O75717 1129 aaPredicted RBP10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 KIAA2012Q0VF49 1180 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 SH2B1Q9NRF2 756 aaPredicted RBP10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 FOSBP53539 338 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 TFCP2Q12800 502 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 PRPF40BQ6NWY9 871 aaKnown RBP10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 CERS3Q8IU89 383 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 PIGBQ92521 554 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 FMN2Q9NZ56 1722 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 ZNF521Q96K83 1311 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 ADGRB2O60241 1585 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 AOX1Q06278 1338 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 TXLNAP40222 546 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 WDR33Q9C0J8 1336 aaKnown RBP10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 ERVV-1B6SEH8 477 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 MCMDC2Q4G0Z9 681 aa10.98□□□□□ -0.65
FNDC3B-201ENST00000336824 GOLGA6L19H0YKK7 550 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 CCDC178Q5BJE1 867 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 CYP27B1O15528 508 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 GOLGA6L3A6NEY3 463 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 PCCAP05165 728 aaPredicted RBP10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 CYP7A1P22680 504 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 HSPA1LP34931 641 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 SEC63Q9UGP8 760 aaKnown RBP10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 SDSP20132 328 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 SSH2Q76I76 1423 aa10.97□□□□□ -0.65
FNDC3B-201ENST00000336824 ZNF142P52746 1687 aaPredicted RBP10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 MFSD6Q6ZSS7 791 aa10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 RANBP6O60518 1105 aaKnown RBP10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 STK3Q13188 491 aa10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 CTCFLQ8NI51 663 aaPredicted RBP10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 CNNM2Q9H8M5 875 aa10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 NOL7Q9UMY1 257 aaKnown RBP10.96□□□□□ -0.65
FNDC3B-201ENST00000336824 SUCLG2Q96I99 432 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms