RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 EPHX2P34913 555 aa18.97■□□□□ 0.63
TSPO-201ENST00000329563 HSPA1AP0DMV8 641 aaKnown RBP18.96■□□□□ 0.63
TSPO-201ENST00000329563 HSPA1BP0DMV9 641 aaKnown RBP18.96■□□□□ 0.63
TSPO-201ENST00000329563 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
TSPO-201ENST00000329563 TRIM28Q13263 835 aaKnown RBP18.96■□□□□ 0.63
TSPO-201ENST00000329563 RTL5Q5HYW3 569 aaPredicted RBP18.96■□□□□ 0.63
TSPO-201ENST00000329563 LARGE2Q8N3Y3 721 aa18.96■□□□□ 0.63
TSPO-201ENST00000329563 PASKQ96RG2 1323 aa18.96■□□□□ 0.63
TSPO-201ENST00000329563 VPS33BQ9H267 617 aa18.95■□□□□ 0.62
TSPO-201ENST00000329563 GRAPQ13588 217 aa18.94■□□□□ 0.62
TSPO-201ENST00000329563 RIC3Q7Z5B4 369 aa18.94■□□□□ 0.62
TSPO-201ENST00000329563 SUPT20HQ8NEM7 779 aa18.94■□□□□ 0.62
TSPO-201ENST00000329563 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
TSPO-201ENST00000329563 TMEM88BA6NKF7 163 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 GOLGA2Q08379 1002 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 SF3B3Q15393 1217 aaKnown RBP18.93■□□□□ 0.62
TSPO-201ENST00000329563 AOC3Q16853 763 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 COL13A1Q5TAT6 717 aaPredicted RBP18.93■□□□□ 0.62
TSPO-201ENST00000329563 SP8Q8IXZ3 490 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 NIM1KQ8IY84 436 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 TNS4Q8IZW8 715 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
TSPO-201ENST00000329563 MYD88Q99836 296 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 RTFDC1Q9BY42 306 aaPredicted RBP18.93■□□□□ 0.62
TSPO-201ENST00000329563 MKRN1Q9UHC7 482 aaKnown RBP18.93■□□□□ 0.62
TSPO-201ENST00000329563 GJA3Q9Y6H8 435 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 CNTNAP1P78357 1384 aa18.93■□□□□ 0.62
TSPO-201ENST00000329563 BBOX1O75936 387 aa18.92■□□□□ 0.62
TSPO-201ENST00000329563 CCDC30Q5VVM6 783 aa18.92■□□□□ 0.62
TSPO-201ENST00000329563 DDX46Q7L014 1031 aaKnown RBP18.92■□□□□ 0.62
TSPO-201ENST00000329563 JARID2Q92833 1246 aaPredicted RBP18.92■□□□□ 0.62
TSPO-201ENST00000329563 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
TSPO-201ENST00000329563 SALL2Q9Y467 1007 aaPredicted RBP18.92■□□□□ 0.62
TSPO-201ENST00000329563 IRS4O14654 1257 aaPredicted RBP18.91■□□□□ 0.62
TSPO-201ENST00000329563 PPIP5K2O43314 1243 aa18.91■□□□□ 0.62
TSPO-201ENST00000329563 G2E3Q7L622 706 aa18.91■□□□□ 0.62
TSPO-201ENST00000329563 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
TSPO-201ENST00000329563 IL16Q14005 1332 aa18.91■□□□□ 0.62
TSPO-201ENST00000329563 FANCIQ9NVI1 1328 aa18.91■□□□□ 0.62
TSPO-201ENST00000329563 ITGBL1O95965 494 aaPredicted RBP18.9■□□□□ 0.62
TSPO-201ENST00000329563 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
TSPO-201ENST00000329563 CNTROBQ8N137 903 aa18.9■□□□□ 0.62
TSPO-201ENST00000329563 ZBTB38Q8NAP3 1195 aaPredicted RBP18.9■□□□□ 0.62
TSPO-201ENST00000329563 METTL22Q9BUU2 404 aaPredicted RBP18.9■□□□□ 0.62
TSPO-201ENST00000329563 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
TSPO-201ENST00000329563 IGKV5-2P06315 115 aa18.89■□□□□ 0.61
TSPO-201ENST00000329563 SCNN1DP51172 638 aa18.89■□□□□ 0.61
TSPO-201ENST00000329563 DPP8Q6V1X1 898 aaPredicted RBP18.89■□□□□ 0.61
TSPO-201ENST00000329563 TMC4Q7Z404 712 aa18.89■□□□□ 0.61
TSPO-201ENST00000329563 MPNDQ8N594 471 aa18.89■□□□□ 0.61
TSPO-201ENST00000329563 ZBED9Q6R2W3 1325 aa18.89■□□□□ 0.61
TSPO-201ENST00000329563 AIDAQ96BJ3 306 aa18.88■□□□□ 0.61
TSPO-201ENST00000329563 TRPM7Q96QT4 1865 aa18.88■□□□□ 0.61
TSPO-201ENST00000329563 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
TSPO-201ENST00000329563 PCCAP05165 728 aaPredicted RBP18.87■□□□□ 0.61
TSPO-201ENST00000329563 KIAA2012Q0VF49 1180 aa18.87■□□□□ 0.61
TSPO-201ENST00000329563 MAP1SQ66K74 1059 aaPredicted RBP18.87■□□□□ 0.61
TSPO-201ENST00000329563 KSR2Q6VAB6 950 aa18.87■□□□□ 0.61
TSPO-201ENST00000329563 USP50Q70EL3 339 aaPredicted RBP18.87■□□□□ 0.61
TSPO-201ENST00000329563 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
TSPO-201ENST00000329563 CCDC191Q8NCU4 936 aa18.87■□□□□ 0.61
TSPO-201ENST00000329563 SEC31BQ9NQW1 1179 aa18.87■□□□□ 0.61
TSPO-201ENST00000329563 EPS15P42566 896 aa18.86■□□□□ 0.61
TSPO-201ENST00000329563 CXCL9Q07325 125 aa18.86■□□□□ 0.61
TSPO-201ENST00000329563 CWC25Q9NXE8 425 aaPredicted RBP18.86■□□□□ 0.61
TSPO-201ENST00000329563 ZNRF3Q9ULT6 936 aa18.86■□□□□ 0.61
TSPO-201ENST00000329563 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
TSPO-201ENST00000329563 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
TSPO-201ENST00000329563 GPSM2P81274 684 aa18.85■□□□□ 0.61
TSPO-201ENST00000329563 CWF19L2Q2TBE0 894 aaKnown RBP18.85■□□□□ 0.61
TSPO-201ENST00000329563 WDR63Q8IWG1 891 aa18.85■□□□□ 0.61
TSPO-201ENST00000329563 CHMP4AQ9BY43 222 aa18.85■□□□□ 0.61
TSPO-201ENST00000329563 ABT1Q9ULW3 272 aaKnown RBP18.85■□□□□ 0.61
TSPO-201ENST00000329563 CDHR2Q9BYE9 1310 aa18.84■□□□□ 0.61
TSPO-201ENST00000329563 YDJCA8MPS7 323 aa18.84■□□□□ 0.61
TSPO-201ENST00000329563 VAMP4O75379 141 aa18.84■□□□□ 0.61
TSPO-201ENST00000329563 HSP90B1P14625 803 aaKnown RBP18.84■□□□□ 0.61
TSPO-201ENST00000329563 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
TSPO-201ENST00000329563 DEFB115Q30KQ5 88 aa18.84■□□□□ 0.61
TSPO-201ENST00000329563 CCDC85AQ96PX6 553 aaPredicted RBP18.84■□□□□ 0.61
TSPO-201ENST00000329563 STK31Q9BXU1 1019 aa18.84■□□□□ 0.61
TSPO-201ENST00000329563 ADARB2Q9NS39 739 aaKnown RBP18.84■□□□□ 0.61
TSPO-201ENST00000329563 POLLQ9UGP5 575 aa18.84■□□□□ 0.61
TSPO-201ENST00000329563 RASSF10A6NK89 507 aa18.83■□□□□ 0.6
TSPO-201ENST00000329563 VEGFBP49765 207 aa18.83■□□□□ 0.6
TSPO-201ENST00000329563 TNIP1Q15025 636 aa18.83■□□□□ 0.6
TSPO-201ENST00000329563 NSFL1CQ9UNZ2 370 aaKnown RBP18.83■□□□□ 0.6
TSPO-201ENST00000329563 RPS8P62241 208 aaKnown RBP18.82■□□□□ 0.6
TSPO-201ENST00000329563 GPR101Q96P66 508 aaPredicted RBP18.82■□□□□ 0.6
TSPO-201ENST00000329563 GPRC5DQ9NZD1 345 aa18.82■□□□□ 0.6
TSPO-201ENST00000329563 NEURL1BA8MQ27 555 aa18.81■□□□□ 0.6
TSPO-201ENST00000329563 PDE8AO60658 829 aa18.81■□□□□ 0.6
TSPO-201ENST00000329563 RAD17O75943 681 aa18.81■□□□□ 0.6
TSPO-201ENST00000329563 CTCFP49711 727 aaPredicted RBP18.81■□□□□ 0.6
TSPO-201ENST00000329563 FMR1Q06787 632 aaKnown RBP eCLIP18.81■□□□□ 0.6
TSPO-201ENST00000329563 FLIIQ13045 1269 aa18.81■□□□□ 0.6
TSPO-201ENST00000329563 CIAPIN1Q6FI81 312 aa18.81■□□□□ 0.6
TSPO-201ENST00000329563 BCL2L13Q9BXK5 485 aa18.81■□□□□ 0.6
TSPO-201ENST00000329563 PRDM10Q9NQV6 1147 aa18.81■□□□□ 0.6
TSPO-201ENST00000329563 ZNF521Q96K83 1311 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms