RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 RTFDC1Q9BY42 306 aaPredicted RBP32.58■■■□□ 2.81
PPP4R4-202ENST00000328839 TRPM7Q96QT4 1865 aa32.57■■■□□ 2.8
PPP4R4-202ENST00000328839 FOXN1O15353 648 aa32.57■■■□□ 2.8
PPP4R4-202ENST00000328839 DEFB115Q30KQ5 88 aa32.57■■■□□ 2.8
PPP4R4-202ENST00000328839 AIDAQ96BJ3 306 aa32.57■■■□□ 2.8
PPP4R4-202ENST00000328839 CFAP44Q96MT7 982 aa32.57■■■□□ 2.8
PPP4R4-202ENST00000328839 ATP5J2-PTCD1G3V325 749 aa32.56■■■□□ 2.8
PPP4R4-202ENST00000328839 CXCL9Q07325 125 aa32.56■■■□□ 2.8
PPP4R4-202ENST00000328839 DUSP27Q5VZP5 1158 aa32.56■■■□□ 2.8
PPP4R4-202ENST00000328839 MBIPQ9NS73 344 aa32.55■■■□□ 2.8
PPP4R4-202ENST00000328839 GPRC5DQ9NZD1 345 aa32.55■■■□□ 2.8
PPP4R4-202ENST00000328839 RASSF10A6NK89 507 aa32.54■■■□□ 2.8
PPP4R4-202ENST00000328839 FAM89AQ96GI7 184 aa32.54■■■□□ 2.8
PPP4R4-202ENST00000328839 PRKRIP1Q9H875 184 aaPredicted RBP32.54■■■□□ 2.8
PPP4R4-202ENST00000328839 HYPKQ9NX55 129 aa32.54■■■□□ 2.8
PPP4R4-202ENST00000328839 LRRC37AA6NMS7 1700 aa32.54■■■□□ 2.8
PPP4R4-202ENST00000328839 FMR1Q06787 632 aaKnown RBP eCLIP32.53■■■□□ 2.8
PPP4R4-202ENST00000328839 KIAA2012Q0VF49 1180 aa32.53■■■□□ 2.8
PPP4R4-202ENST00000328839 RTL5Q5HYW3 569 aaPredicted RBP32.53■■■□□ 2.8
PPP4R4-202ENST00000328839 ADARB2Q9NS39 739 aaKnown RBP32.53■■■□□ 2.8
PPP4R4-202ENST00000328839 GMPSP49915 693 aaPredicted RBP32.52■■■□□ 2.8
PPP4R4-202ENST00000328839 CIAPIN1Q6FI81 312 aa32.52■■■□□ 2.8
PPP4R4-202ENST00000328839 ISCA1Q9BUE6 129 aa32.52■■■□□ 2.8
PPP4R4-202ENST00000328839 RAD17O75943 681 aa32.51■■■□□ 2.79
PPP4R4-202ENST00000328839 PAXIP1Q6ZW49 1069 aaPredicted RBP32.51■■■□□ 2.79
PPP4R4-202ENST00000328839 TMC4Q7Z404 712 aa32.51■■■□□ 2.79
PPP4R4-202ENST00000328839 BCL2L13Q9BXK5 485 aa32.51■■■□□ 2.79
PPP4R4-202ENST00000328839 DUOX1Q9NRD9 1551 aa32.5■■■□□ 2.79
PPP4R4-202ENST00000328839 TRAF5O00463 557 aa32.5■■■□□ 2.79
PPP4R4-202ENST00000328839 WDR33Q9C0J8 1336 aaKnown RBP32.5■■■□□ 2.79
PPP4R4-202ENST00000328839 APAF1O14727 1248 aa32.48■■■□□ 2.79
PPP4R4-202ENST00000328839 CTCFP49711 727 aaPredicted RBP32.48■■■□□ 2.79
PPP4R4-202ENST00000328839 TNIP1Q15025 636 aa32.48■■■□□ 2.79
PPP4R4-202ENST00000328839 RIC3Q7Z5B4 369 aa32.47■■■□□ 2.79
PPP4R4-202ENST00000328839 CELF1Q92879 486 aaKnown RBP32.47■■■□□ 2.79
PPP4R4-202ENST00000328839 ELL2O00472 640 aaPredicted RBP32.46■■■□□ 2.79
PPP4R4-202ENST00000328839 GOLGA2Q08379 1002 aa32.46■■■□□ 2.79
PPP4R4-202ENST00000328839 GRM1Q13255 1194 aa32.46■■■□□ 2.79
PPP4R4-202ENST00000328839 WBP1LQ9NX94 342 aa32.46■■■□□ 2.79
PPP4R4-202ENST00000328839 NSFL1CQ9UNZ2 370 aaKnown RBP32.46■■■□□ 2.79
PPP4R4-202ENST00000328839 GNAI1P63096 354 aa32.45■■■□□ 2.79
PPP4R4-202ENST00000328839 SF3B3Q15393 1217 aaKnown RBP32.45■■■□□ 2.79
PPP4R4-202ENST00000328839 IFT57Q9NWB7 429 aa32.45■■■□□ 2.79
PPP4R4-202ENST00000328839 IRS4O14654 1257 aaPredicted RBP32.44■■■□□ 2.78
PPP4R4-202ENST00000328839 ZNF853P0CG23 659 aa32.44■■■□□ 2.78
PPP4R4-202ENST00000328839 CALD1Q05682 793 aaKnown RBP32.44■■■□□ 2.78
PPP4R4-202ENST00000328839 PRDM10Q9NQV6 1147 aa32.44■■■□□ 2.78
PPP4R4-202ENST00000328839 CDHR2Q9BYE9 1310 aa32.44■■■□□ 2.78
PPP4R4-202ENST00000328839 COL4A1P02462 1669 aa32.43■■■□□ 2.78
PPP4R4-202ENST00000328839 YDJCA8MPS7 323 aa32.43■■■□□ 2.78
PPP4R4-202ENST00000328839 WASHC4Q2M389 1173 aa32.43■■■□□ 2.78
PPP4R4-202ENST00000328839 PHAXQ9H814 394 aaKnown RBP32.43■■■□□ 2.78
PPP4R4-202ENST00000328839 C6orf229H3BNL8 230 aa32.42■■■□□ 2.78
PPP4R4-202ENST00000328839 CST9Q5W186 159 aa32.42■■■□□ 2.78
PPP4R4-202ENST00000328839 RIMBP2O15034 1052 aa32.41■■■□□ 2.78
PPP4R4-202ENST00000328839 LBX1P52954 281 aa32.41■■■□□ 2.78
PPP4R4-202ENST00000328839 MAP2K1Q02750 393 aaPredicted RBP32.41■■■□□ 2.78
PPP4R4-202ENST00000328839 TRIM28Q13263 835 aaKnown RBP32.41■■■□□ 2.78
PPP4R4-202ENST00000328839 CAPNS2Q96L46 248 aa32.41■■■□□ 2.78
PPP4R4-202ENST00000328839 ECE1P42892 770 aa32.4■■■□□ 2.78
PPP4R4-202ENST00000328839 CYP4F22Q6NT55 531 aa32.4■■■□□ 2.78
PPP4R4-202ENST00000328839 MYD88Q99836 296 aa32.4■■■□□ 2.78
PPP4R4-202ENST00000328839 GLIS2Q9BZE0 524 aaPredicted RBP32.4■■■□□ 2.78
PPP4R4-202ENST00000328839 DBNDD1Q9H9R9 158 aa32.4■■■□□ 2.78
PPP4R4-202ENST00000328839 CNOT7Q9UIV1 285 aaKnown RBP32.4■■■□□ 2.78
PPP4R4-202ENST00000328839 GPSM2P81274 684 aa32.39■■■□□ 2.78
PPP4R4-202ENST00000328839 THSD7BQ9C0I4 1608 aa32.38■■■□□ 2.77
PPP4R4-202ENST00000328839 SHTN1A0MZ66 631 aa32.38■■■□□ 2.77
PPP4R4-202ENST00000328839 CELF2O95319 508 aaKnown RBP32.38■■■□□ 2.77
PPP4R4-202ENST00000328839 ZBTB38Q8NAP3 1195 aaPredicted RBP32.38■■■□□ 2.77
PPP4R4-202ENST00000328839 TRPM4Q8TD43 1214 aa32.38■■■□□ 2.77
PPP4R4-202ENST00000328839 TLL2Q9Y6L7 1015 aa32.38■■■□□ 2.77
PPP4R4-202ENST00000328839 H7C1D1 291 aa32.37■■■□□ 2.77
PPP4R4-202ENST00000328839 MICALL2Q8IY33 904 aa32.37■■■□□ 2.77
PPP4R4-202ENST00000328839 ZNF408Q9H9D4 720 aa32.37■■■□□ 2.77
PPP4R4-202ENST00000328839 POLLQ9UGP5 575 aa32.37■■■□□ 2.77
PPP4R4-202ENST00000328839 ZBTB12Q9Y330 459 aaPredicted RBP32.37■■■□□ 2.77
PPP4R4-202ENST00000328839 HIRAP54198 1017 aaPredicted RBP32.36■■■□□ 2.77
PPP4R4-202ENST00000328839 RPS8P62241 208 aaKnown RBP32.36■■■□□ 2.77
PPP4R4-202ENST00000328839 C8orf58Q8NAV2 365 aa32.36■■■□□ 2.77
PPP4R4-202ENST00000328839 EYA3Q99504 573 aa32.36■■■□□ 2.77
PPP4R4-202ENST00000328839 PSMD14O00487 310 aa32.35■■■□□ 2.77
PPP4R4-202ENST00000328839 HSP90B1P14625 803 aaKnown RBP32.35■■■□□ 2.77
PPP4R4-202ENST00000328839 GPR101Q96P66 508 aaPredicted RBP32.35■■■□□ 2.77
PPP4R4-202ENST00000328839 HSPA8P11142 646 aaKnown RBP32.34■■■□□ 2.77
PPP4R4-202ENST00000328839 DOK7Q18PE1 504 aa32.34■■■□□ 2.77
PPP4R4-202ENST00000328839 ZC3H15Q8WU90 426 aaKnown RBP32.34■■■□□ 2.77
PPP4R4-202ENST00000328839 BEGAINQ9BUH8 593 aa32.34■■■□□ 2.77
PPP4R4-202ENST00000328839 PGAP2Q9UHJ9 254 aa32.34■■■□□ 2.77
PPP4R4-202ENST00000328839 ECE2O60344 883 aa32.33■■■□□ 2.77
PPP4R4-202ENST00000328839 SEC31BQ9NQW1 1179 aa32.33■■■□□ 2.77
PPP4R4-202ENST00000328839 DDX58O95786 925 aaKnown RBP32.32■■■□□ 2.76
PPP4R4-202ENST00000328839 CCDC30Q5VVM6 783 aa32.32■■■□□ 2.76
PPP4R4-202ENST00000328839 CDC37L1Q7L3B6 337 aa32.32■■■□□ 2.76
PPP4R4-202ENST00000328839 CCDC191Q8NCU4 936 aa32.32■■■□□ 2.76
PPP4R4-202ENST00000328839 TBC1D16Q8TBP0 767 aa32.32■■■□□ 2.76
PPP4R4-202ENST00000328839 JARID2Q92833 1246 aaPredicted RBP32.32■■■□□ 2.76
PPP4R4-202ENST00000328839 CCDC85AQ96PX6 553 aaPredicted RBP32.31■■■□□ 2.76
PPP4R4-202ENST00000328839 CWC25Q9NXE8 425 aaPredicted RBP32.31■■■□□ 2.76
PPP4R4-202ENST00000328839 CCDC152Q4G0S7 254 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms