RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 RTFDC1Q9BY42 306 aaPredicted RBP10.55□□□□□ -0.72
CCNC-201ENST00000326298 SEC31BQ9NQW1 1179 aa10.55□□□□□ -0.72
CCNC-201ENST00000326298 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
CCNC-201ENST00000326298 CLEC11AQ9Y240 323 aa10.55□□□□□ -0.72
CCNC-201ENST00000326298 WTIPA6NIX2 430 aaPredicted RBP10.54□□□□□ -0.72
CCNC-201ENST00000326298 GNAI1P63096 354 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 GRAPQ13588 217 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 SP8Q8IXZ3 490 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 GRAPLQ8TC17 118 aaPredicted RBP10.54□□□□□ -0.72
CCNC-201ENST00000326298 CCDC85AQ96PX6 553 aaPredicted RBP10.54□□□□□ -0.72
CCNC-201ENST00000326298 MYD88Q99836 296 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 KCNQ5Q9NR82 932 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 SALL2Q9Y467 1007 aaPredicted RBP10.54□□□□□ -0.72
CCNC-201ENST00000326298 RAD17O75943 681 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 DPP8Q6V1X1 898 aaPredicted RBP10.54□□□□□ -0.72
CCNC-201ENST00000326298 DDX46Q7L014 1031 aaKnown RBP10.54□□□□□ -0.72
CCNC-201ENST00000326298 WWC1Q8IX03 1113 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 CNTROBQ8N137 903 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
CCNC-201ENST00000326298 TRAF5O00463 557 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 IRS4O14654 1257 aaPredicted RBP10.53□□□□□ -0.72
CCNC-201ENST00000326298 BBOX1O75936 387 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 EIF6P56537 245 aaKnown RBP10.53□□□□□ -0.72
CCNC-201ENST00000326298 SF3B3Q15393 1217 aaKnown RBP10.53□□□□□ -0.72
CCNC-201ENST00000326298 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 MPNDQ8N594 471 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 HSPA1AP0DMV8 641 aaKnown RBP10.53□□□□□ -0.72
CCNC-201ENST00000326298 HSPA1BP0DMV9 641 aaKnown RBP10.53□□□□□ -0.72
CCNC-201ENST00000326298 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
CCNC-201ENST00000326298 POLLQ9UGP5 575 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 LRRC37AA6NMS7 1700 aa10.53□□□□□ -0.72
CCNC-201ENST00000326298 IGKV5-2P06315 115 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 HIRAP54198 1017 aaPredicted RBP10.52□□□□□ -0.73
CCNC-201ENST00000326298 GPSM2P81274 684 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 TRIM28Q13263 835 aaKnown RBP10.52□□□□□ -0.73
CCNC-201ENST00000326298 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
CCNC-201ENST00000326298 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 EGFRP00533 1210 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 GMPSP49915 693 aaPredicted RBP10.52□□□□□ -0.73
CCNC-201ENST00000326298 DBNDD1Q9H9R9 158 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 GPRC5DQ9NZD1 345 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 ZNRF3Q9ULT6 936 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 NSFL1CQ9UNZ2 370 aaKnown RBP10.52□□□□□ -0.73
CCNC-201ENST00000326298 MAP3K2Q9Y2U5 619 aa10.52□□□□□ -0.73
CCNC-201ENST00000326298 PI4KAP2A4QPH2 592 aa10.51□□□□□ -0.73
CCNC-201ENST00000326298 VEGFBP49765 207 aa10.51□□□□□ -0.73
CCNC-201ENST00000326298 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
CCNC-201ENST00000326298 PI4KAP1Q8N8J0 262 aa10.51□□□□□ -0.73
CCNC-201ENST00000326298 ZBTB38Q8NAP3 1195 aaPredicted RBP10.51□□□□□ -0.73
CCNC-201ENST00000326298 MRS2Q9HD23 443 aa10.51□□□□□ -0.73
CCNC-201ENST00000326298 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
CCNC-201ENST00000326298 GOLGA2Q08379 1002 aa10.5□□□□□ -0.73
CCNC-201ENST00000326298 DOK7Q18PE1 504 aa10.5□□□□□ -0.73
CCNC-201ENST00000326298 CST9Q5W186 159 aa10.5□□□□□ -0.73
CCNC-201ENST00000326298 PNMA8AQ86V59 439 aaPredicted RBP10.5□□□□□ -0.73
CCNC-201ENST00000326298 TRPM4Q8TD43 1214 aa10.5□□□□□ -0.73
CCNC-201ENST00000326298 METTL22Q9BUU2 404 aaPredicted RBP10.5□□□□□ -0.73
CCNC-201ENST00000326298 ZNF316A6NFI3 1004 aaPredicted RBP10.5□□□□□ -0.73
CCNC-201ENST00000326298 TMEM88BA6NKF7 163 aa10.5□□□□□ -0.73
CCNC-201ENST00000326298 RTL9Q8NET4 1388 aa10.49□□□□□ -0.73
CCNC-201ENST00000326298 RPS8P62241 208 aaKnown RBP10.49□□□□□ -0.73
CCNC-201ENST00000326298 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
CCNC-201ENST00000326298 SCN9AQ15858 1988 aa10.49□□□□□ -0.73
CCNC-201ENST00000326298 LMOD1P29536 600 aaPredicted RBP10.49□□□□□ -0.73
CCNC-201ENST00000326298 CCDC27Q2M243 656 aa10.49□□□□□ -0.73
CCNC-201ENST00000326298 TWISTNBQ3B726 338 aaPredicted RBP10.49□□□□□ -0.73
CCNC-201ENST00000326298 CCDC30Q5VVM6 783 aa10.49□□□□□ -0.73
CCNC-201ENST00000326298 CIAPIN1Q6FI81 312 aa10.49□□□□□ -0.73
CCNC-201ENST00000326298 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
CCNC-201ENST00000326298 GLIS2Q9BZE0 524 aaPredicted RBP10.49□□□□□ -0.73
CCNC-201ENST00000326298 FANCIQ9NVI1 1328 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 C6orf229H3BNL8 230 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 PSMD14O00487 310 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 FOXN1O15353 648 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 PCCAP05165 728 aaPredicted RBP10.48□□□□□ -0.73
CCNC-201ENST00000326298 CALD1Q05682 793 aaKnown RBP10.48□□□□□ -0.73
CCNC-201ENST00000326298 WASHC4Q2M389 1173 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 CWC25Q9NXE8 425 aaPredicted RBP10.48□□□□□ -0.73
CCNC-201ENST00000326298 KSR2Q6VAB6 950 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 SAMD7Q7Z3H4 446 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 SUPT20HQ8NEM7 779 aa10.48□□□□□ -0.73
CCNC-201ENST00000326298 TMX4Q9H1E5 349 aaPredicted RBP10.48□□□□□ -0.73
CCNC-201ENST00000326298 USP50Q70EL3 339 aaPredicted RBP10.47□□□□□ -0.73
CCNC-201ENST00000326298 VPS33BQ9H267 617 aa10.47□□□□□ -0.73
CCNC-201ENST00000326298 ADARB2Q9NS39 739 aaKnown RBP10.47□□□□□ -0.73
CCNC-201ENST00000326298 CNOT7Q9UIV1 285 aaKnown RBP10.47□□□□□ -0.73
CCNC-201ENST00000326298 ASTN2O75129 1339 aaPredicted RBP10.47□□□□□ -0.73
CCNC-201ENST00000326298 RASSF10A6NK89 507 aa10.46□□□□□ -0.73
CCNC-201ENST00000326298 NEURL1BA8MQ27 555 aa10.46□□□□□ -0.73
CCNC-201ENST00000326298 PDE8AO60658 829 aa10.46□□□□□ -0.73
CCNC-201ENST00000326298 VAMP4O75379 141 aa10.46□□□□□ -0.73
CCNC-201ENST00000326298 EXOSC9Q06265 439 aaKnown RBP10.46□□□□□ -0.73
CCNC-201ENST00000326298 MICALL2Q8IY33 904 aa10.46□□□□□ -0.73
CCNC-201ENST00000326298 TTLL11Q8NHH1 800 aa10.46□□□□□ -0.73
CCNC-201ENST00000326298 GREM2Q9H772 168 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms