RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 GYS1P13807 737 aa15.72■□□□□ 0.11
DDX39A-202ENST00000324340 BAG6P46379 1132 aa15.72■□□□□ 0.11
DDX39A-202ENST00000324340 EN1Q05925 392 aaPredicted RBP15.72■□□□□ 0.11
DDX39A-202ENST00000324340 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
DDX39A-202ENST00000324340 SLC10A5Q5PT55 438 aa15.72■□□□□ 0.11
DDX39A-202ENST00000324340 CCDC125Q86Z20 511 aa15.72■□□□□ 0.11
DDX39A-202ENST00000324340 NYXQ9GZU5 481 aa15.72■□□□□ 0.11
DDX39A-202ENST00000324340 TFCP2L1Q9NZI6 479 aa15.72■□□□□ 0.11
DDX39A-202ENST00000324340 SALL3Q9BXA9 1300 aa15.71■□□□□ 0.11
DDX39A-202ENST00000324340 CARMIL3Q8ND23 1372 aa15.71■□□□□ 0.11
DDX39A-202ENST00000324340 RTL9Q8NET4 1388 aa15.71■□□□□ 0.11
DDX39A-202ENST00000324340 SMARCA5O60264 1052 aaPredicted RBP15.71■□□□□ 0.11
DDX39A-202ENST00000324340 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
DDX39A-202ENST00000324340 CASZ1Q86V15 1759 aa15.71■□□□□ 0.1
DDX39A-202ENST00000324340 APBB1O00213 710 aa15.7■□□□□ 0.1
DDX39A-202ENST00000324340 SASH1O94885 1247 aa15.7■□□□□ 0.1
DDX39A-202ENST00000324340 G3BP1Q13283 466 aaKnown RBP eCLIP15.7■□□□□ 0.1
DDX39A-202ENST00000324340 NFIXQ14938 502 aa15.7■□□□□ 0.1
DDX39A-202ENST00000324340 PLEKHM2Q8IWE5 1019 aa15.7■□□□□ 0.1
DDX39A-202ENST00000324340 KLHDC4Q8TBB5 520 aa15.7■□□□□ 0.1
DDX39A-202ENST00000324340 LRP5O75197 1615 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 CIAO1O76071 339 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 TM4SF1P30408 202 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 FAM161AQ3B820 660 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 TPTE2Q6XPS3 522 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 BICDL1Q6ZP65 573 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
DDX39A-202ENST00000324340 NUTM1Q86Y26 1132 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 OSBPL3Q9H4L5 887 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 RIC1Q4ADV7 1423 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 PNPLA7Q6ZV29 1317 aa15.69■□□□□ 0.1
DDX39A-202ENST00000324340 FAM177BA6PVY3 158 aa15.68■□□□□ 0.1
DDX39A-202ENST00000324340 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-202ENST00000324340 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
DDX39A-202ENST00000324340 OS9Q13438 667 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-202ENST00000324340 ERFEQ4G0M1 354 aa15.68■□□□□ 0.1
DDX39A-202ENST00000324340 GLIPR1L2Q4G1C9 344 aa15.68■□□□□ 0.1
DDX39A-202ENST00000324340 NBPF5PQ86XG9 351 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-202ENST00000324340 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-202ENST00000324340 GREM2Q9H772 168 aa15.68■□□□□ 0.1
DDX39A-202ENST00000324340 SF3B3Q15393 1217 aaKnown RBP15.67■□□□□ 0.1
DDX39A-202ENST00000324340 SLC15A2Q16348 729 aa15.67■□□□□ 0.1
DDX39A-202ENST00000324340 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
DDX39A-202ENST00000324340 OTUD7AQ8TE49 926 aaPredicted RBP15.67■□□□□ 0.1
DDX39A-202ENST00000324340 SIL1Q9H173 461 aa15.67■□□□□ 0.1
DDX39A-202ENST00000324340 ABCC12Q96J65 1359 aa15.67■□□□□ 0.1
DDX39A-202ENST00000324340 ANKRD18BA2A2Z9 1011 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 EYA2O00167 538 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 ITGA6P23229 1130 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 IL15P40933 162 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-202ENST00000324340 DEFB132Q7Z7B7 95 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 CLASRPQ8N2M8 674 aaKnown RBP15.66■□□□□ 0.1
DDX39A-202ENST00000324340 IL1RAPL2Q9NP60 686 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 STAP2Q9UGK3 403 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 NRXN2Q9P2S2 1712 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 AOX1Q06278 1338 aa15.66■□□□□ 0.1
DDX39A-202ENST00000324340 PDE1AP54750 535 aa15.65■□□□□ 0.1
DDX39A-202ENST00000324340 CCDC152Q4G0S7 254 aa15.65■□□□□ 0.1
DDX39A-202ENST00000324340 BMP2KLQ5H9B9 411 aa15.65■□□□□ 0.1
DDX39A-202ENST00000324340 NLGN1Q8N2Q7 840 aa15.65■□□□□ 0.1
DDX39A-202ENST00000324340 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-202ENST00000324340 STK32BQ9NY57 414 aa15.65■□□□□ 0.1
DDX39A-202ENST00000324340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.65■□□□□ 0.1
DDX39A-202ENST00000324340 MX1P20591 662 aa15.64■□□□□ 0.09
DDX39A-202ENST00000324340 GTF2E1P29083 439 aaPredicted RBP15.64■□□□□ 0.09
DDX39A-202ENST00000324340 TNRC6CQ9HCJ0 1690 aaKnown RBP15.64■□□□□ 0.09
DDX39A-202ENST00000324340 POLRMTO00411 1230 aaKnown RBP15.63■□□□□ 0.09
DDX39A-202ENST00000324340 DDR1Q08345 913 aa15.63■□□□□ 0.09
DDX39A-202ENST00000324340 C8orf34Q49A92 452 aa15.63■□□□□ 0.09
DDX39A-202ENST00000324340 TTC22Q5TAA0 569 aa15.63■□□□□ 0.09
DDX39A-202ENST00000324340 CCDC85AQ96PX6 553 aaPredicted RBP15.63■□□□□ 0.09
DDX39A-202ENST00000324340 GPR108Q9NPR9 543 aa15.63■□□□□ 0.09
DDX39A-202ENST00000324340 SERPINB2P05120 415 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 TFCP2Q12800 502 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 LRRC24Q50LG9 513 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 PRR5LQ6MZQ0 368 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 C3orf67Q6ZVT6 689 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 EAF2Q96CJ1 260 aaPredicted RBP15.62■□□□□ 0.09
DDX39A-202ENST00000324340 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 PUS3Q9BZE2 481 aaKnown RBP15.62■□□□□ 0.09
DDX39A-202ENST00000324340 RIPOR2Q9Y4F9 1068 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 TTC41PQ6P2S7 1318 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 GSPT1P15170 499 aaKnown RBP15.62■□□□□ 0.09
DDX39A-202ENST00000324340 TNNI3KQ59H18 835 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 TAF7LQ5H9L4 462 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 FPGT-TNNI3KV9GXZ4 949 aa15.62■□□□□ 0.09
DDX39A-202ENST00000324340 ZNF609O15014 1411 aa15.61■□□□□ 0.09
DDX39A-202ENST00000324340 IFIT2P09913 472 aaKnown RBP15.61■□□□□ 0.09
DDX39A-202ENST00000324340 LDHAL6AQ6ZMR3 332 aa15.61■□□□□ 0.09
DDX39A-202ENST00000324340 AACSQ86V21 672 aa15.61■□□□□ 0.09
DDX39A-202ENST00000324340 COL4A1P02462 1669 aa15.6■□□□□ 0.09
DDX39A-202ENST00000324340 PI4K2BQ8TCG2 481 aa15.6■□□□□ 0.09
DDX39A-202ENST00000324340 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
DDX39A-202ENST00000324340 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
DDX39A-202ENST00000324340 CEP126Q9P2H0 1117 aa15.6■□□□□ 0.09
DDX39A-202ENST00000324340 SPEF2Q9C093 1822 aa15.59■□□□□ 0.09
DDX39A-202ENST00000324340 MROH5Q6ZUA9 1318 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms