RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 ERBB4Q15303 1308 aa16.11■□□□□ 0.17
DDX54-202ENST00000314045 ITGA6P23229 1130 aa16.1■□□□□ 0.17
DDX54-202ENST00000314045 IFIT3O14879 490 aaKnown RBP16.1■□□□□ 0.17
DDX54-202ENST00000314045 IQCA1Q86XH1 822 aa16.1■□□□□ 0.17
DDX54-202ENST00000314045 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
DDX54-202ENST00000314045 DLC1Q96QB1 1528 aa16.1■□□□□ 0.17
DDX54-202ENST00000314045 PDE8AO60658 829 aa16.1■□□□□ 0.17
DDX54-202ENST00000314045 A0A1B0GUL7 405 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 ANAPC15P60006 121 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
DDX54-202ENST00000314045 NRXN1Q9ULB1 1477 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 VWDEQ8N2E2 1590 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 SLF2Q8IX21 1173 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 SSH3Q8TE77 659 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 TCEANC2Q96MN5 208 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
DDX54-202ENST00000314045 SETD1BQ9UPS6 1966 aaKnown RBP16.09■□□□□ 0.17
DDX54-202ENST00000314045 CYP7A1P22680 504 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 PIBF1Q8WXW3 757 aa16.09■□□□□ 0.17
DDX54-202ENST00000314045 MED14O60244 1454 aa16.08■□□□□ 0.17
DDX54-202ENST00000314045 MRE11P49959 708 aa16.08■□□□□ 0.17
DDX54-202ENST00000314045 CCT2P78371 535 aaKnown RBP16.08■□□□□ 0.17
DDX54-202ENST00000314045 TNNI3KQ59H18 835 aa16.08■□□□□ 0.17
DDX54-202ENST00000314045 CCDC82Q8N4S0 544 aa16.08■□□□□ 0.17
DDX54-202ENST00000314045 CFAP45Q9UL16 551 aa16.08■□□□□ 0.17
DDX54-202ENST00000314045 FPGT-TNNI3KV9GXZ4 949 aa16.08■□□□□ 0.17
DDX54-202ENST00000314045 SPATA32Q96LK8 384 aa16.08■□□□□ 0.16
DDX54-202ENST00000314045 CYP27B1O15528 508 aa16.08■□□□□ 0.16
DDX54-202ENST00000314045 BAG3O95817 575 aa16.08■□□□□ 0.16
DDX54-202ENST00000314045 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 SSFA2P28290 1259 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 ZNF444Q8N0Y2 327 aaPredicted RBP16.07■□□□□ 0.16
DDX54-202ENST00000314045 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 CDC42BPGQ6DT37 1551 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 GOLGA8BA8MQT2 603 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 WASF1Q92558 559 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 KDRP35968 1356 aa16.07■□□□□ 0.16
DDX54-202ENST00000314045 LOC102724428A0A0B4J2F2 783 aa16.06■□□□□ 0.16
DDX54-202ENST00000314045 SIK1P57059 783 aa16.06■□□□□ 0.16
DDX54-202ENST00000314045 HMGN5P82970 282 aaKnown RBP16.06■□□□□ 0.16
DDX54-202ENST00000314045 CRACR2BQ8N4Y2 399 aaPredicted RBP16.06■□□□□ 0.16
DDX54-202ENST00000314045 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
DDX54-202ENST00000314045 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
DDX54-202ENST00000314045 LETM1O95202 739 aaPredicted RBP16.06■□□□□ 0.16
DDX54-202ENST00000314045 NASPP49321 788 aaPredicted RBP16.06■□□□□ 0.16
DDX54-202ENST00000314045 CNBD1Q8NA66 436 aa16.06■□□□□ 0.16
DDX54-202ENST00000314045 BRF1Q92994 677 aa16.06■□□□□ 0.16
DDX54-202ENST00000314045 RNF113AO15541 343 aaKnown RBP16.05■□□□□ 0.16
DDX54-202ENST00000314045 MFSD6Q6ZSS7 791 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 ADGRB1O14514 1584 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 SPATA31D1Q6ZQQ2 1576 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 ANKRD20A12PQ8NF67 263 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 CTCFLQ8NI51 663 aaPredicted RBP16.05■□□□□ 0.16
DDX54-202ENST00000314045 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
DDX54-202ENST00000314045 TPM3P06753 285 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 GUCY1B3Q02153 619 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 C8orf76Q96K31 380 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 LRRC2Q9BYS8 371 aa16.05■□□□□ 0.16
DDX54-202ENST00000314045 TMEM67Q5HYA8 995 aa16.04■□□□□ 0.16
DDX54-202ENST00000314045 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
DDX54-202ENST00000314045 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
DDX54-202ENST00000314045 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
DDX54-202ENST00000314045 MCM5P33992 734 aa16.04■□□□□ 0.16
DDX54-202ENST00000314045 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
DDX54-202ENST00000314045 NAT10Q9H0A0 1025 aaKnown RBP16.04■□□□□ 0.16
DDX54-202ENST00000314045 TSR1Q2NL82 804 aaKnown RBP16.03■□□□□ 0.16
DDX54-202ENST00000314045 CCDC24Q8N4L8 307 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 NOL7Q9UMY1 257 aaKnown RBP16.03■□□□□ 0.16
DDX54-202ENST00000314045 GOLGA8AA7E2F4 631 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 TXLNAP40222 546 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 ZC3H12CQ9C0D7 883 aaKnown RBP16.03■□□□□ 0.16
DDX54-202ENST00000314045 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 TPM2P07951 284 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 TPM1P09493 284 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 OLFM4Q6UX06 510 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 NECAB1Q8N987 351 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
DDX54-202ENST00000314045 ANKRD2Q9GZV1 360 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 ZBTB1Q9Y2K1 713 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 MICU3Q86XE3 530 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 TSPY26PQ9H489 355 aa16.03■□□□□ 0.16
DDX54-202ENST00000314045 TECPR2O15040 1411 aa16.02■□□□□ 0.16
DDX54-202ENST00000314045 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
DDX54-202ENST00000314045 ZGPATQ8N5A5 531 aaKnown RBP16.02■□□□□ 0.16
DDX54-202ENST00000314045 XAGE2Q96GT9 111 aa16.02■□□□□ 0.16
DDX54-202ENST00000314045 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
DDX54-202ENST00000314045 DEPDC5O75140 1603 aa16.02■□□□□ 0.16
DDX54-202ENST00000314045 GJB2P29033 226 aa16.02■□□□□ 0.16
DDX54-202ENST00000314045 RAB11FIP4Q86YS3 637 aa16.02■□□□□ 0.16
DDX54-202ENST00000314045 SNX21Q969T3 373 aa16.02■□□□□ 0.16
DDX54-202ENST00000314045 TNMDQ9H2S6 317 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms