RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
RUNX3-201ENST00000308873 CACTINQ8WUQ7 758 aaKnown RBP17.45■□□□□ 0.38
RUNX3-201ENST00000308873 ZSCAN25Q6NSZ9 544 aa17.45■□□□□ 0.38
RUNX3-201ENST00000308873 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
RUNX3-201ENST00000308873 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
RUNX3-201ENST00000308873 HIP1O00291 1037 aa17.45■□□□□ 0.38
RUNX3-201ENST00000308873 FUCA2Q9BTY2 467 aa17.45■□□□□ 0.38
RUNX3-201ENST00000308873 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
RUNX3-201ENST00000308873 UBE3BQ7Z3V4 1068 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 OVOS2A0A0J9YW53 1432 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 OVOS2Q6IE36 1432 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 OTUD7BQ6GQQ9 843 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
RUNX3-201ENST00000308873 SKILP12757 684 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 APOBRQ0VD83 1088 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 MAP4K1Q92918 833 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 HDAC5Q9UQL6 1122 aa17.44■□□□□ 0.38
RUNX3-201ENST00000308873 RIMS1Q86UR5 1692 aaKnown RBP17.43■□□□□ 0.38
RUNX3-201ENST00000308873 SPTLC3Q9NUV7 552 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 TMEM2Q9UHN6 1383 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 CEP135Q66GS9 1140 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 CCDC144CPQ8IYA2 1237 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 FAM177A1Q8N128 213 aaPredicted RBP17.43■□□□□ 0.38
RUNX3-201ENST00000308873 PGBD1Q96JS3 809 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 ERICH4A6NGS2 130 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 PTPN14Q15678 1187 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
RUNX3-201ENST00000308873 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
RUNX3-201ENST00000308873 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
RUNX3-201ENST00000308873 HAND2P61296 217 aa17.42■□□□□ 0.38
RUNX3-201ENST00000308873 FSIP1Q8NA03 581 aa17.42■□□□□ 0.38
RUNX3-201ENST00000308873 GOLIM4O00461 696 aa17.42■□□□□ 0.38
RUNX3-201ENST00000308873 ZSCAN20P17040 1043 aaPredicted RBP17.42■□□□□ 0.38
RUNX3-201ENST00000308873 TFCP2Q12800 502 aa17.42■□□□□ 0.38
RUNX3-201ENST00000308873 C11orf57Q6ZUT1 292 aaPredicted RBP17.42■□□□□ 0.38
RUNX3-201ENST00000308873 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
RUNX3-201ENST00000308873 DLC1Q96QB1 1528 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 AOPEPQ8N6M6 819 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 CLSTN2Q9H4D0 955 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
RUNX3-201ENST00000308873 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 PHF8Q9UPP1 1060 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 USP27XA6NNY8 438 aa17.41■□□□□ 0.38
RUNX3-201ENST00000308873 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
RUNX3-201ENST00000308873 DBNDD2Q9BQY9 259 aa17.4■□□□□ 0.38
RUNX3-201ENST00000308873 HSP90AB3PQ58FF7 597 aa17.4■□□□□ 0.38
RUNX3-201ENST00000308873 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
RUNX3-201ENST00000308873 CGNQ9P2M7 1197 aaKnown RBP17.4■□□□□ 0.38
RUNX3-201ENST00000308873 HSP90AA4PQ58FG1 418 aa17.4■□□□□ 0.38
RUNX3-201ENST00000308873 LINS1Q8NG48 757 aa17.4■□□□□ 0.38
RUNX3-201ENST00000308873 TMX1Q9H3N1 280 aa17.4■□□□□ 0.38
RUNX3-201ENST00000308873 A0A1B0GVL5 298 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 CCDC69A6NI79 296 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 DMTNQ08495 405 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 PTPN21Q16825 1174 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 ADCY9O60503 1353 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 TSPOAP1O95153 1857 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
RUNX3-201ENST00000308873 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
RUNX3-201ENST00000308873 NCBP1Q09161 790 aaKnown RBP17.39■□□□□ 0.37
RUNX3-201ENST00000308873 GNL2Q13823 731 aaKnown RBP17.39■□□□□ 0.37
RUNX3-201ENST00000308873 EPHA10Q5JZY3 1008 aa17.39■□□□□ 0.37
RUNX3-201ENST00000308873 RNMTO43148 476 aaKnown RBP17.38■□□□□ 0.37
RUNX3-201ENST00000308873 STK38Q15208 465 aa17.38■□□□□ 0.37
RUNX3-201ENST00000308873 SIRT1Q96EB6 747 aa17.38■□□□□ 0.37
RUNX3-201ENST00000308873 CLTCQ00610 1675 aaKnown RBP17.38■□□□□ 0.37
RUNX3-201ENST00000308873 TIMM10P62072 90 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
RUNX3-201ENST00000308873 KDRP35968 1356 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 A0A087WZG4 1122 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 PTPDC1A2A3K4 754 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 EPB41L2O43491 1005 aaKnown RBP17.37■□□□□ 0.37
RUNX3-201ENST00000308873 TAF5LO75529 589 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 ALDH1L1O75891 902 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
RUNX3-201ENST00000308873 SMTNL1A8MU46 457 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 CPLX1O14810 134 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 CYP21A2P08686 494 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 SCRN1Q12765 414 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 NFATC2IPQ8NCF5 419 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 DBNLQ9UJU6 430 aaKnown RBP17.36■□□□□ 0.37
RUNX3-201ENST00000308873 KRT32Q14532 448 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 ELF2Q15723 593 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 TMC6Q7Z403 805 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 GTF3C6Q969F1 213 aa17.36■□□□□ 0.37
RUNX3-201ENST00000308873 STX1AQ16623 288 aa17.35■□□□□ 0.37
RUNX3-201ENST00000308873 IP6K1Q92551 441 aa17.35■□□□□ 0.37
RUNX3-201ENST00000308873 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
RUNX3-201ENST00000308873 GJB4Q9NTQ9 266 aa17.35■□□□□ 0.37
RUNX3-201ENST00000308873 A0A0G2JLW4 131 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms