RNA–Protein interactions for RNA: ENST00000308208.9

CCDC63-201, Transcript of coiled-coil domain containing 63, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC63, Length 1,993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63-201ENST00000308208 GREM2Q9H772 168 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 COL4A1P02462 1669 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 DPEP1P16444 411 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 FAM161AQ3B820 660 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
CCDC63-201ENST00000308208 ZNF622Q969S3 477 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCDC63-201ENST00000308208 COL11A2P13942 1736 aaPredicted RBP25.55■■□□□ 1.68
CCDC63-201ENST00000308208 KLHDC4Q8TBB5 520 aa25.55■■□□□ 1.68
CCDC63-201ENST00000308208 CACNA1SQ13698 1873 aa25.54■■□□□ 1.68
CCDC63-201ENST00000308208 PDE6BP35913 854 aa25.54■■□□□ 1.68
CCDC63-201ENST00000308208 PLA2G12BQ9BX93 195 aa25.54■■□□□ 1.68
CCDC63-201ENST00000308208 ZNF594Q96JF6 807 aaPredicted RBP25.53■■□□□ 1.68
CCDC63-201ENST00000308208 KIF13BQ9NQT8 1826 aa25.53■■□□□ 1.68
CCDC63-201ENST00000308208 PNMA6EA0A0J9YXQ4 647 aa25.53■■□□□ 1.68
CCDC63-201ENST00000308208 SRGNP10124 158 aa25.53■■□□□ 1.68
CCDC63-201ENST00000308208 H0YIN7 160 aa25.52■■□□□ 1.68
CCDC63-201ENST00000308208 KCNA3P22001 575 aa25.52■■□□□ 1.68
CCDC63-201ENST00000308208 SYT17Q9BSW7 474 aa25.52■■□□□ 1.68
CCDC63-201ENST00000308208 CSF1RP07333 972 aa25.51■■□□□ 1.67
CCDC63-201ENST00000308208 CRY2Q49AN0 593 aa25.51■■□□□ 1.67
CCDC63-201ENST00000308208 RPGRQ92834 1020 aaKnown RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 ZNF219Q9P2Y4 722 aaPredicted RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 PCDHB15Q9Y5E8 787 aa25.51■■□□□ 1.67
CCDC63-201ENST00000308208 KLRG2A4D1S0 409 aaPredicted RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 SF3B3Q15393 1217 aaKnown RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 CELF1Q92879 486 aaKnown RBP25.51■■□□□ 1.67
CCDC63-201ENST00000308208 ITGA6P23229 1130 aa25.5■■□□□ 1.67
CCDC63-201ENST00000308208 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
CCDC63-201ENST00000308208 CCDC152Q4G0S7 254 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 SRGAP3O43295 1099 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 RABL6Q3YEC7 729 aaPredicted RBP25.49■■□□□ 1.67
CCDC63-201ENST00000308208 OLFM4Q6UX06 510 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 SIRT2Q8IXJ6 389 aa25.49■■□□□ 1.67
CCDC63-201ENST00000308208 SPEF2Q9C093 1822 aa25.48■■□□□ 1.67
CCDC63-201ENST00000308208 CEP85Q6P2H3 762 aa25.48■■□□□ 1.67
CCDC63-201ENST00000308208 PA2G4Q9UQ80 394 aaKnown RBP25.48■■□□□ 1.67
CCDC63-201ENST00000308208 KIAA1551Q9HCM1 1747 aa25.48■■□□□ 1.67
CCDC63-201ENST00000308208 DDX46Q7L014 1031 aaKnown RBP25.47■■□□□ 1.67
CCDC63-201ENST00000308208 SLX4Q8IY92 1834 aa25.47■■□□□ 1.67
CCDC63-201ENST00000308208 MASTLQ96GX5 879 aa25.47■■□□□ 1.67
CCDC63-201ENST00000308208 NEFLP07196 543 aa25.46■■□□□ 1.67
CCDC63-201ENST00000308208 TGFB2P61812 414 aa25.46■■□□□ 1.67
CCDC63-201ENST00000308208 IFIT5Q13325 482 aaKnown RBP25.46■■□□□ 1.67
CCDC63-201ENST00000308208 HSP90B1P14625 803 aaKnown RBP25.45■■□□□ 1.67
CCDC63-201ENST00000308208 NPR1P16066 1061 aa25.45■■□□□ 1.67
CCDC63-201ENST00000308208 CCDC57Q2TAC2 916 aa25.45■■□□□ 1.67
CCDC63-201ENST00000308208 SIL1Q9H173 461 aa25.45■■□□□ 1.67
CCDC63-201ENST00000308208 ATP8B2P98198 1209 aa25.45■■□□□ 1.66
CCDC63-201ENST00000308208 PUS3Q9BZE2 481 aaKnown RBP25.45■■□□□ 1.66
CCDC63-201ENST00000308208 RIC1Q4ADV7 1423 aa25.44■■□□□ 1.66
CCDC63-201ENST00000308208 RBM17Q96I25 401 aaKnown RBP25.44■■□□□ 1.66
CCDC63-201ENST00000308208 RFX5P48382 616 aaPredicted RBP25.44■■□□□ 1.66
CCDC63-201ENST00000308208 ANKRD18BA2A2Z9 1011 aa25.43■■□□□ 1.66
CCDC63-201ENST00000308208 HOXA10P31260 410 aaPredicted RBP25.43■■□□□ 1.66
CCDC63-201ENST00000308208 BCL11AQ9H165 835 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 CHMP4BQ9H444 224 aaKnown RBP25.42■■□□□ 1.66
CCDC63-201ENST00000308208 HDAC5Q9UQL6 1122 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 LRP5O75197 1615 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 TAF7LQ5H9L4 462 aa25.42■■□□□ 1.66
CCDC63-201ENST00000308208 PRPF40BQ6NWY9 871 aaKnown RBP25.42■■□□□ 1.66
CCDC63-201ENST00000308208 RPS8P62241 208 aaKnown RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 PTPN12Q05209 780 aaKnown RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 GRAPQ13588 217 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 LRRC24Q50LG9 513 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 PELP1Q8IZL8 1130 aaKnown RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 GRAPLQ8TC17 118 aaPredicted RBP25.41■■□□□ 1.66
CCDC63-201ENST00000308208 PIM2Q9P1W9 311 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 BCS1LQ9Y276 419 aa25.41■■□□□ 1.66
CCDC63-201ENST00000308208 BRCA1P38398 1863 aaKnown RBP25.4■■□□□ 1.66
CCDC63-201ENST00000308208 DLEC1Q9Y238 1755 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 MTX1Q13505 466 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 STYK1Q6J9G0 422 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 ANKRD18AQ8IVF6 992 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 TTLL6Q8N841 843 aa25.4■■□□□ 1.66
CCDC63-201ENST00000308208 WTIPA6NIX2 430 aaPredicted RBP25.39■■□□□ 1.66
CCDC63-201ENST00000308208 C21orf2O43822 256 aa25.39■■□□□ 1.66
CCDC63-201ENST00000308208 CRAMP1Q96RY5 1269 aa25.39■■□□□ 1.66
CCDC63-201ENST00000308208 APBB1O00213 710 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 ALDH1B1P30837 517 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 LDHAL6AQ6ZMR3 332 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 HELBQ8NG08 1087 aaPredicted RBP25.38■■□□□ 1.65
CCDC63-201ENST00000308208 SSH3Q8TE77 659 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 POLA2Q14181 598 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 RPAP2Q8IXW5 612 aaPredicted RBP25.38■■□□□ 1.65
CCDC63-201ENST00000308208 CDC5LQ99459 802 aaKnown RBP25.38■■□□□ 1.65
CCDC63-201ENST00000308208 MPHOSPH8Q99549 860 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 EXOC6BQ9Y2D4 811 aa25.38■■□□□ 1.65
CCDC63-201ENST00000308208 CNKSR1Q969H4 720 aa25.37■■□□□ 1.65
CCDC63-201ENST00000308208 SNAP23O00161 211 aa25.36■■□□□ 1.65
CCDC63-201ENST00000308208 PPEF1O14829 653 aaPredicted RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 IGHDP01880 384 aa25.36■■□□□ 1.65
CCDC63-201ENST00000308208 IGHMBP2P38935 993 aaKnown RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 DALRD3Q5D0E6 543 aaKnown RBP25.36■■□□□ 1.65
CCDC63-201ENST00000308208 CNNM1Q9NRU3 951 aa25.36■■□□□ 1.65
CCDC63-201ENST00000308208 SURF6O75683 361 aaKnown RBP25.35■■□□□ 1.65
CCDC63-201ENST00000308208 RTL9Q8NET4 1388 aa25.35■■□□□ 1.65
CCDC63-201ENST00000308208 TAF5LO75529 589 aa25.35■■□□□ 1.65
CCDC63-201ENST00000308208 PDZRN3Q9UPQ7 1066 aa25.34■■□□□ 1.65
CCDC63-201ENST00000308208 BBOX1O75936 387 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms