RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PPP2R5CQ13362 524 aa14.46□□□□□ -0.1
USP38-201ENST00000307017 TNIP1Q15025 636 aa14.46□□□□□ -0.1
USP38-201ENST00000307017 ZNF569Q5MCW4 686 aa14.46□□□□□ -0.1
USP38-201ENST00000307017 CCDC150Q8NCX0 1101 aa14.46□□□□□ -0.1
USP38-201ENST00000307017 C6orf229H3BNL8 230 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 BMS1Q14692 1282 aaKnown RBP14.45□□□□□ -0.1
USP38-201ENST00000307017 TMEM266Q2M3C6 531 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 CETN2P41208 172 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 SYKP43405 635 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 PPP4R3AQ6IN85 833 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 VPS36Q86VN1 386 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 BRF1Q92994 677 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 CIZ1Q9ULV3 898 aaPredicted RBP14.45□□□□□ -0.1
USP38-201ENST00000307017 KLF18A0A0U1RQI7 1052 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 LRSAM1Q6UWE0 723 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 SEPT14Q6ZU15 432 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 UBLCP1Q8WVY7 318 aaPredicted RBP14.45□□□□□ -0.1
USP38-201ENST00000307017 DACT1Q9NYF0 836 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 CUL5Q93034 780 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 CALML4Q96GE6 196 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 SCAND2PQ9GZW5 306 aaPredicted RBP14.45□□□□□ -0.1
USP38-201ENST00000307017 TMOD3Q9NYL9 352 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
USP38-201ENST00000307017 STAT6P42226 847 aa14.45□□□□□ -0.1
USP38-201ENST00000307017 RAPGEF3O95398 923 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 NEK1Q96PY6 1258 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 GDAP1L1Q96MZ0 367 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 STX8Q9UNK0 236 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 UBE2Q2Q8WVN8 375 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 IKBKGQ9Y6K9 419 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 AQRO60306 1485 aaKnown RBP eCLIP14.44□□□□□ -0.16e-6■□□□□ 10.5
USP38-201ENST00000307017 IARSP41252 1262 aaKnown RBP14.44□□□□□ -0.1
USP38-201ENST00000307017 KIAA0753Q2KHM9 967 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 KRT222Q8N1A0 295 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 LRRC43Q8N309 656 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 MCM7P33993 719 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 HSPA4P34932 840 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 CCDC114Q96M63 670 aa14.44□□□□□ -0.1
USP38-201ENST00000307017 RRBP1Q9P2E9 1410 aaKnown RBP14.43□□□□□ -0.1
USP38-201ENST00000307017 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 CCDC65Q8IXS2 484 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 SDSP20132 328 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 AAMPQ13685 434 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 UBE3BQ7Z3V4 1068 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 PPP1R42Q7Z4L9 355 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 KAT14Q9H8E8 782 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 AKR1B10O60218 316 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 APOBRQ0VD83 1088 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 MAP3K12Q12852 859 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 PPP2R5DQ14738 602 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 MIGA1Q8NAN2 632 aa14.43□□□□□ -0.1
USP38-201ENST00000307017 NUDT16Q96DE0 195 aaKnown RBP14.43□□□□□ -0.1
USP38-201ENST00000307017 GIGYF2Q6Y7W6 1299 aaKnown RBP14.42□□□□□ -0.1
USP38-201ENST00000307017 FEZ1Q99689 392 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 CLSTN2Q9H4D0 955 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 NKTRP30414 1462 aaKnown RBP14.42□□□□□ -0.1
USP38-201ENST00000307017 TTC31Q49AM3 519 aaPredicted RBP14.42□□□□□ -0.1
USP38-201ENST00000307017 FRMD3A2A2Y4 597 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 ZBTB16Q05516 673 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 ALG1Q9BT22 464 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 UTP14AQ9BVJ6 771 aaKnown RBP14.42□□□□□ -0.1
USP38-201ENST00000307017 IFNKQ9P0W0 207 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 FYCO1Q9BQS8 1478 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 GRIPAP1Q4V328 841 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 MAEAQ7L5Y9 396 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 ZSCAN22P10073 491 aaPredicted RBP14.42□□□□□ -0.1
USP38-201ENST00000307017 UBXN1Q04323 297 aa14.42□□□□□ -0.1
USP38-201ENST00000307017 SLC5A1P13866 664 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 UBE2HP62256 183 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 SPECC1LQ69YQ0 1117 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 PDE1CQ14123 709 aaPredicted RBP14.41□□□□□ -0.1
USP38-201ENST00000307017 RPAP2Q8IXW5 612 aaPredicted RBP14.41□□□□□ -0.1
USP38-201ENST00000307017 DYNC1I1O14576 645 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 FERP16591 822 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 PLCB3Q01970 1234 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 PSMD6Q15008 389 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 CERS3Q8IU89 383 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 NAP1L3Q99457 506 aaPredicted RBP14.41□□□□□ -0.1
USP38-201ENST00000307017 TRIM31Q9BZY9 425 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 CHRNA2Q15822 529 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 SEC62Q99442 399 aaKnown RBP14.41□□□□□ -0.1
USP38-201ENST00000307017 MEIS3Q99687 375 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
USP38-201ENST00000307017 UBA7P41226 1012 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 TTC22Q5TAA0 569 aa14.41□□□□□ -0.1
USP38-201ENST00000307017 HELBQ8NG08 1087 aaPredicted RBP14.41□□□□□ -0.1
USP38-201ENST00000307017 NAA15Q9BXJ9 866 aaKnown RBP14.41□□□□□ -0.1
USP38-201ENST00000307017 PPM1EQ8WY54 764 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 STARD3NLO95772 234 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 TAOK3Q9H2K8 898 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 MCM3P25205 808 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 TCP11L1Q9NUJ3 509 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 PI4KAP2A4QPH2 592 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 HARSP12081 509 aaKnown RBP14.4□□□□□ -0.1
USP38-201ENST00000307017 PI4KAP1Q8N8J0 262 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 ARFGAP3Q9NP61 516 aa14.4□□□□□ -0.1
USP38-201ENST00000307017 CTNND2Q9UQB3 1225 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms