RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 LDHCP07864 332 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 SPTY2D1Q68D10 685 aaPredicted RBP13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 ANXA1P04083 346 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 C8orf34Q49A92 452 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
NPC1L1-201ENST00000289547 VPS72Q15906 364 aa13.29□□□□□ -0.28
NPC1L1-201ENST00000289547 ARHGAP45Q92619 1136 aa13.29□□□□□ -0.28
NPC1L1-201ENST00000289547 ADCY5O95622 1261 aa13.29□□□□□ -0.28
NPC1L1-201ENST00000289547 TTLL12Q14166 644 aaPredicted RBP13.29□□□□□ -0.28
NPC1L1-201ENST00000289547 NLGN1Q8N2Q7 840 aa13.29□□□□□ -0.28
NPC1L1-201ENST00000289547 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
NPC1L1-201ENST00000289547 ZSCAN23Q3MJ62 389 aa13.29□□□□□ -0.28
NPC1L1-201ENST00000289547 SERPINC1P01008 464 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 MAP3K11Q16584 847 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 RRP12Q5JTH9 1297 aaKnown RBP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 DNAJC10Q8IXB1 793 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 PSMA5P28066 241 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 NOLC1Q14978 699 aaKnown RBP eCLIP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 LGR6Q9HBX8 967 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 IGHDP01880 384 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 IPO4Q8TEX9 1081 aaKnown RBP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 PLCD4Q9BRC7 762 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 BCORL1Q5H9F3 1711 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 KIF2AO00139 706 aaPredicted RBP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 IDH1O75874 414 aaKnown RBP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 LARP1BQ659C4 914 aaKnown RBP13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
NPC1L1-201ENST00000289547 IRS4O14654 1257 aaPredicted RBP13.27□□□□□ -0.28
NPC1L1-201ENST00000289547 LRRFIP2Q9Y608 721 aaKnown RBP13.27□□□□□ -0.28
NPC1L1-201ENST00000289547 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 SIK1P57059 783 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 ZNF804AQ7Z570 1209 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 KRT222Q8N1A0 295 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 OGFOD1Q8N543 542 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 OVOS2A0A0J9YW53 1432 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 OVOS2Q6IE36 1432 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 PDE6BP35913 854 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 ZGPATQ8N5A5 531 aaKnown RBP13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 SUPT20HQ8NEM7 779 aa13.27□□□□□ -0.29
NPC1L1-201ENST00000289547 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 CAMK4Q16566 473 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 GRM8O00222 908 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 GIMAP7Q8NHV1 300 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 CENPHQ9H3R5 247 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 GDPD2Q9HCC8 539 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 TRMT1Q9NXH9 659 aaKnown RBP13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 SH3TC1Q8TE82 1336 aa13.26□□□□□ -0.29
NPC1L1-201ENST00000289547 GSTO1P78417 241 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 CRB1P82279 1406 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 UQCRFS1P1P0C7P4 283 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 USP5P45974 858 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 GPR162Q16538 588 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 SPATA32Q96LK8 384 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 ALDH1B1P30837 517 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 TTF1Q15361 905 aaPredicted RBP13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 CTNNA3Q9UI47 895 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 SLIT1O75093 1534 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
NPC1L1-201ENST00000289547 URI1O94763 535 aaPredicted RBP13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 TDO2P48775 406 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 TRPM1Q7Z4N2 1603 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 ATP2B2Q01814 1243 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 FAM193AP78312 1265 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 STK38Q15208 465 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 BAG3O95817 575 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 IBSPP21815 317 aaPredicted RBP13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 ME1P48163 572 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 BRPF1P55201 1214 aaPredicted RBP13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 CYP46A1Q9Y6A2 500 aa13.24□□□□□ -0.29
NPC1L1-201ENST00000289547 XBP1P17861 261 aa13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
NPC1L1-201ENST00000289547 IL1RAPL2Q9NP60 686 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms