RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 SMC4Q9NTJ3 1288 aa31.96■■■□□ 2.71
PDF-201ENST00000288022 TIAM2Q8IVF5 1701 aa31.95■■■□□ 2.71
PDF-201ENST00000288022 ALDH1L2Q3SY69 923 aa31.95■■■□□ 2.71
PDF-201ENST00000288022 SLC4A10Q6U841 1118 aa31.95■■■□□ 2.71
PDF-201ENST00000288022 ATP6V0A2Q9Y487 856 aa31.95■■■□□ 2.71
PDF-201ENST00000288022 BEND3Q5T5X7 828 aa31.94■■■□□ 2.7
PDF-201ENST00000288022 SLC51AQ86UW1 340 aa31.94■■■□□ 2.7
PDF-201ENST00000288022 TAF1P21675 1872 aa31.94■■■□□ 2.7
PDF-201ENST00000288022 CCDC152Q4G0S7 254 aa31.93■■■□□ 2.7
PDF-201ENST00000288022 GRIPAP1Q4V328 841 aa31.93■■■□□ 2.7
PDF-201ENST00000288022 ZNF277Q9NRM2 450 aaPredicted RBP31.93■■■□□ 2.7
PDF-201ENST00000288022 H7C1W4 665 aa31.92■■■□□ 2.7
PDF-201ENST00000288022 CCDC85AQ96PX6 553 aaPredicted RBP31.92■■■□□ 2.7
PDF-201ENST00000288022 PTPRCP08575 1304 aa31.92■■■□□ 2.7
PDF-201ENST00000288022 ZC3H4Q9UPT8 1303 aaKnown RBP31.92■■■□□ 2.7
PDF-201ENST00000288022 CELF1Q92879 486 aaKnown RBP31.91■■■□□ 2.7
PDF-201ENST00000288022 SP8Q8IXZ3 490 aa31.9■■■□□ 2.7
PDF-201ENST00000288022 PSMD1Q99460 953 aa31.9■■■□□ 2.7
PDF-201ENST00000288022 DICER1Q9UPY3 1922 aaKnown RBP31.9■■■□□ 2.7
PDF-201ENST00000288022 SNED1Q8TER0 1413 aa31.9■■■□□ 2.7
PDF-201ENST00000288022 CTSWP56202 376 aa31.89■■■□□ 2.7
PDF-201ENST00000288022 TMC4Q7Z404 712 aa31.89■■■□□ 2.7
PDF-201ENST00000288022 SRCIN1Q9C0H9 1055 aa31.88■■■□□ 2.69
PDF-201ENST00000288022 SEC31BQ9NQW1 1179 aa31.88■■■□□ 2.69
PDF-201ENST00000288022 ZBED9Q6R2W3 1325 aa31.88■■■□□ 2.69
PDF-201ENST00000288022 KDM2BQ8NHM5 1336 aa31.88■■■□□ 2.69
PDF-201ENST00000288022 IARSP41252 1262 aaKnown RBP31.87■■■□□ 2.69
PDF-201ENST00000288022 MYH3P11055 1940 aa31.87■■■□□ 2.69
PDF-201ENST00000288022 ALDH1L1O75891 902 aa31.86■■■□□ 2.69
PDF-201ENST00000288022 RPS8P62241 208 aaKnown RBP31.86■■■□□ 2.69
PDF-201ENST00000288022 CASP7P55210 303 aa31.85■■■□□ 2.69
PDF-201ENST00000288022 DPP8Q6V1X1 898 aaPredicted RBP31.85■■■□□ 2.69
PDF-201ENST00000288022 MPNDQ8N594 471 aa31.85■■■□□ 2.69
PDF-201ENST00000288022 COL4A1P02462 1669 aa31.85■■■□□ 2.69
PDF-201ENST00000288022 TTLL11Q8NHH1 800 aa31.84■■■□□ 2.69
PDF-201ENST00000288022 C9orf78Q9NZ63 289 aaPredicted RBP31.84■■■□□ 2.69
PDF-201ENST00000288022 RARSP54136 660 aaKnown RBP31.83■■■□□ 2.69
PDF-201ENST00000288022 PLA2G12BQ9BX93 195 aa31.83■■■□□ 2.69
PDF-201ENST00000288022 GRM8O00222 908 aa31.82■■■□□ 2.68
PDF-201ENST00000288022 DPY19L2Q6NUT2 758 aa31.82■■■□□ 2.68
PDF-201ENST00000288022 SUPT20HQ8NEM7 779 aa31.82■■■□□ 2.68
PDF-201ENST00000288022 NMRK2Q9NPI5 230 aa31.82■■■□□ 2.68
PDF-201ENST00000288022 LRRC37AA6NMS7 1700 aa31.82■■■□□ 2.68
PDF-201ENST00000288022 GLTPD2A6NH11 291 aa31.81■■■□□ 2.68
PDF-201ENST00000288022 ANKRD18AQ8IVF6 992 aa31.81■■■□□ 2.68
PDF-201ENST00000288022 JDP2Q8WYK2 163 aa31.81■■■□□ 2.68
PDF-201ENST00000288022 GREM2Q9H772 168 aa31.81■■■□□ 2.68
PDF-201ENST00000288022 NOB1Q9ULX3 412 aaKnown RBP31.81■■■□□ 2.68
PDF-201ENST00000288022 LARGE2Q8N3Y3 721 aa31.8■■■□□ 2.68
PDF-201ENST00000288022 CDC5LQ99459 802 aaKnown RBP31.8■■■□□ 2.68
PDF-201ENST00000288022 NSFL1CQ9UNZ2 370 aaKnown RBP31.79■■■□□ 2.68
PDF-201ENST00000288022 PPIP5K2O43314 1243 aa31.78■■■□□ 2.68
PDF-201ENST00000288022 RTL9Q8NET4 1388 aa31.78■■■□□ 2.68
PDF-201ENST00000288022 BRPF1P55201 1214 aaPredicted RBP31.77■■■□□ 2.68
PDF-201ENST00000288022 RTFDC1Q9BY42 306 aaPredicted RBP31.77■■■□□ 2.68
PDF-201ENST00000288022 RRAGCQ9HB90 399 aa31.77■■■□□ 2.68
PDF-201ENST00000288022 KIF16BQ96L93 1317 aa31.76■■■□□ 2.68
PDF-201ENST00000288022 GPSM2P81274 684 aa31.76■■■□□ 2.67
PDF-201ENST00000288022 AOC3Q16853 763 aa31.76■■■□□ 2.67
PDF-201ENST00000288022 FAM161AQ3B820 660 aa31.76■■■□□ 2.67
PDF-201ENST00000288022 CHMP3Q9Y3E7 222 aa31.76■■■□□ 2.67
PDF-201ENST00000288022 KIF3CO14782 793 aa31.75■■■□□ 2.67
PDF-201ENST00000288022 API5Q9BZZ5 524 aaKnown RBP31.75■■■□□ 2.67
PDF-201ENST00000288022 CSF1RP07333 972 aa31.74■■■□□ 2.67
PDF-201ENST00000288022 ITGA6P23229 1130 aa31.74■■■□□ 2.67
PDF-201ENST00000288022 FOXO4P98177 505 aa31.74■■■□□ 2.67
PDF-201ENST00000288022 NIM1KQ8IY84 436 aa31.74■■■□□ 2.67
PDF-201ENST00000288022 VPS33BQ9H267 617 aa31.74■■■□□ 2.67
PDF-201ENST00000288022 SPEF2Q9C093 1822 aa31.74■■■□□ 2.67
PDF-201ENST00000288022 ANKIB1Q9P2G1 1089 aa31.73■■■□□ 2.67
PDF-201ENST00000288022 COL4A5P29400 1685 aa31.73■■■□□ 2.67
PDF-201ENST00000288022 ZNF541Q9H0D2 1346 aa31.73■■■□□ 2.67
PDF-201ENST00000288022 DUOX1Q9NRD9 1551 aa31.73■■■□□ 2.67
PDF-201ENST00000288022 C6orf229H3BNL8 230 aa31.72■■■□□ 2.67
PDF-201ENST00000288022 DDNO94850 711 aaPredicted RBP31.72■■■□□ 2.67
PDF-201ENST00000288022 NBPF7P0C2Y1 421 aaPredicted RBP31.72■■■□□ 2.67
PDF-201ENST00000288022 IGHMBP2P38935 993 aaKnown RBP31.72■■■□□ 2.67
PDF-201ENST00000288022 FZD9O00144 591 aa31.71■■■□□ 2.67
PDF-201ENST00000288022 LMBR1LQ6UX01 489 aa31.71■■■□□ 2.67
PDF-201ENST00000288022 C16orf71Q8IYS4 520 aaPredicted RBP31.71■■■□□ 2.67
PDF-201ENST00000288022 ANKRD18BA2A2Z9 1011 aa31.7■■■□□ 2.67
PDF-201ENST00000288022 BCAR3O75815 825 aa31.7■■■□□ 2.67
PDF-201ENST00000288022 CCT4P50991 539 aaKnown RBP31.7■■■□□ 2.67
PDF-201ENST00000288022 EIF6P56537 245 aaKnown RBP31.7■■■□□ 2.67
PDF-201ENST00000288022 C1QTNF8P60827 252 aa31.7■■■□□ 2.67
PDF-201ENST00000288022 KIAA2012Q0VF49 1180 aa31.7■■■□□ 2.67
PDF-201ENST00000288022 EPHA10Q5JZY3 1008 aa31.7■■■□□ 2.67
PDF-201ENST00000288022 FRAT1Q92837 279 aaPredicted RBP31.7■■■□□ 2.67
PDF-201ENST00000288022 IFIT5Q13325 482 aaKnown RBP31.69■■■□□ 2.66
PDF-201ENST00000288022 SUCLG2Q96I99 432 aa31.69■■■□□ 2.66
PDF-201ENST00000288022 BSDC1Q9NW68 430 aaPredicted RBP31.69■■■□□ 2.66
PDF-201ENST00000288022 POLLQ9UGP5 575 aa31.69■■■□□ 2.66
PDF-201ENST00000288022 UTYO14607 1347 aa31.69■■■□□ 2.66
PDF-201ENST00000288022 IPO8O15397 1037 aaKnown RBP31.68■■■□□ 2.66
PDF-201ENST00000288022 VEGFAP15692 232 aaPredicted RBP31.68■■■□□ 2.66
PDF-201ENST00000288022 WASHC4Q2M389 1173 aa31.68■■■□□ 2.66
PDF-201ENST00000288022 ARHGAP45Q92619 1136 aa31.68■■■□□ 2.66
PDF-201ENST00000288022 EYA3Q99504 573 aa31.68■■■□□ 2.66
PDF-201ENST00000288022 MPHOSPH8Q99549 860 aa31.68■■■□□ 2.66
PDF-201ENST00000288022 WDR90Q96KV7 1748 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms