RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 HS1BP3Q53T59 392 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 RNF20Q5VTR2 975 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
LPCAT1-201ENST00000283415 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 CREBRFQ8IUR6 639 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 TMEM63CQ9P1W3 806 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 GPTP24298 496 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 ALDH1L1O75891 902 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 CKAP2LQ8IYA6 745 aa16.37■□□□□ 0.21
LPCAT1-201ENST00000283415 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
LPCAT1-201ENST00000283415 CHST3Q7LGC8 479 aa16.36■□□□□ 0.21
LPCAT1-201ENST00000283415 ECHDC1Q9NTX5 307 aa16.36■□□□□ 0.21
LPCAT1-201ENST00000283415 ATP6V1DQ9Y5K8 247 aa16.36■□□□□ 0.21
LPCAT1-201ENST00000283415 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
LPCAT1-201ENST00000283415 CCT2P78371 535 aaKnown RBP16.36■□□□□ 0.21
LPCAT1-201ENST00000283415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
LPCAT1-201ENST00000283415 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
LPCAT1-201ENST00000283415 AXIN2Q9Y2T1 843 aa16.35■□□□□ 0.21
LPCAT1-201ENST00000283415 DCCP43146 1447 aa16.35■□□□□ 0.21
LPCAT1-201ENST00000283415 HAND2P61296 217 aa16.35■□□□□ 0.21
LPCAT1-201ENST00000283415 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
LPCAT1-201ENST00000283415 GTF2E1P29083 439 aaPredicted RBP16.35■□□□□ 0.21
LPCAT1-201ENST00000283415 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 MEGF6O75095 1541 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 GJB2P29033 226 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 AK2P54819 239 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 BICC1Q9H694 974 aaKnown RBP16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 ST3GAL1Q11201 340 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 CSPP1Q1MSJ5 1256 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
LPCAT1-201ENST00000283415 BECN2A8MW95 431 aa16.33■□□□□ 0.21
LPCAT1-201ENST00000283415 CCDC129Q6ZRS4 1044 aa16.33■□□□□ 0.21
LPCAT1-201ENST00000283415 USP48Q86UV5 1035 aa16.33■□□□□ 0.21
LPCAT1-201ENST00000283415 RASEFQ8IZ41 740 aa16.33■□□□□ 0.21
LPCAT1-201ENST00000283415 CPLX1O14810 134 aa16.33■□□□□ 0.2
LPCAT1-201ENST00000283415 GADD45BO75293 160 aaPredicted RBP16.33■□□□□ 0.2
LPCAT1-201ENST00000283415 GOLIM4O00461 696 aa16.33■□□□□ 0.2
LPCAT1-201ENST00000283415 KSR2Q6VAB6 950 aa16.33■□□□□ 0.2
LPCAT1-201ENST00000283415 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 SPEF2Q9C093 1822 aa16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 RUFY3Q7L099 469 aa16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 MED23Q9ULK4 1368 aa16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 DNM1Q05193 864 aaKnown RBP16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 RRP12Q5JTH9 1297 aaKnown RBP16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 LIMCH1Q9UPQ0 1083 aa16.32■□□□□ 0.2
LPCAT1-201ENST00000283415 GOLGA6L6A8MZA4 724 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 GOLGA6L19H0YKK7 550 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 GRM8O00222 908 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 ERBB3P21860 1342 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 CBX1P83916 185 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 LARP1Q6PKG0 1096 aaKnown RBP16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
LPCAT1-201ENST00000283415 NMIQ13287 307 aaPredicted RBP16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 ERC1Q8IUD2 1116 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 HYPKQ9NX55 129 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 STX6O43752 255 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 SASH1O94885 1247 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 ADCY5O95622 1261 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 TIMM10P62072 90 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
LPCAT1-201ENST00000283415 IGSF3O75054 1194 aa16.29■□□□□ 0.2
LPCAT1-201ENST00000283415 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
LPCAT1-201ENST00000283415 USP16Q9Y5T5 823 aa16.29■□□□□ 0.2
LPCAT1-201ENST00000283415 IGKV5-2P06315 115 aa16.29■□□□□ 0.2
LPCAT1-201ENST00000283415 SUCLG2Q96I99 432 aa16.29■□□□□ 0.2
LPCAT1-201ENST00000283415 PSMA5P28066 241 aa16.29■□□□□ 0.2
LPCAT1-201ENST00000283415 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 SASS6Q6UVJ0 657 aa16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 ZNF594Q96JF6 807 aaPredicted RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 PTH1RQ03431 593 aa16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 RFX7Q2KHR2 1363 aa16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 SPDYE4A6NLX3 237 aa16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 NUTM2BA6NNL0 878 aaPredicted RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 NUTM2EB1AL46 878 aaPredicted RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 ZNF500O60304 480 aaPredicted RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 TSGA10IPQ3SY00 556 aa16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 NUTM2AQ8IVF1 878 aaPredicted RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 SDF4Q9BRK5 362 aa16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 NOL7Q9UMY1 257 aaKnown RBP16.28■□□□□ 0.2
LPCAT1-201ENST00000283415 CNNM1Q9NRU3 951 aa16.27■□□□□ 0.2
LPCAT1-201ENST00000283415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.27■□□□□ 0.23e-9■■□□□ 13.2
LPCAT1-201ENST00000283415 IDH1O75874 414 aaKnown RBP16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 RFX5P48382 616 aaPredicted RBP16.27■□□□□ 0.19
LPCAT1-201ENST00000283415 FILIP1Q7Z7B0 1213 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms