RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
A1CF-201ENST00000282641 JAKMIP2Q96AA8 810 aa9.91□□□□□ -0.82
A1CF-201ENST00000282641 RRP36Q96EU6 259 aaKnown RBP9.91□□□□□ -0.82
A1CF-201ENST00000282641 CHIC2Q9UKJ5 165 aa9.91□□□□□ -0.82
A1CF-201ENST00000282641 HMGB3O15347 200 aaKnown RBP9.9□□□□□ -0.82
A1CF-201ENST00000282641 U2AF1L5P0DN76 240 aaPredicted RBP9.9□□□□□ -0.82
A1CF-201ENST00000282641 U2AF1Q01081 240 aaKnown RBP eCLIP9.9□□□□□ -0.82
A1CF-201ENST00000282641 SEMA3FQ13275 785 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 WDR78Q5VTH9 848 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 GRIN2AQ12879 1464 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 XBP1P17861 261 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 PDILTQ8N807 584 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 PANK3Q9H999 370 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 LIN7AO14910 233 aaPredicted RBP9.9□□□□□ -0.82
A1CF-201ENST00000282641 RNASELQ05823 741 aaKnown RBP9.9□□□□□ -0.82
A1CF-201ENST00000282641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.82
A1CF-201ENST00000282641 SARM1Q6SZW1 724 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 PRAG1Q86YV5 1406 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 TRIM29Q14134 588 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 SPECC1Q5M775 1068 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 THOC1Q96FV9 657 aaKnown RBP9.9□□□□□ -0.82
A1CF-201ENST00000282641 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
A1CF-201ENST00000282641 KCND1Q9NSA2 647 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 KIAA1210Q9ULL0 1709 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 KIAA1524Q8TCG1 905 aa9.9□□□□□ -0.82
A1CF-201ENST00000282641 ITIH3Q06033 890 aa9.9□□□□□ -0.83
A1CF-201ENST00000282641 AMOTQ4VCS5 1084 aa9.9□□□□□ -0.83
A1CF-201ENST00000282641 CFAP61Q8NHU2 1237 aa9.9□□□□□ -0.83
A1CF-201ENST00000282641 KCNG4Q8TDN1 519 aa9.9□□□□□ -0.83
A1CF-201ENST00000282641 TFIP11Q9UBB9 837 aaKnown RBP9.9□□□□□ -0.83
A1CF-201ENST00000282641 RNF14Q9UBS8 474 aa9.9□□□□□ -0.83
A1CF-201ENST00000282641 CEP131Q9UPN4 1083 aa9.9□□□□□ -0.83
A1CF-201ENST00000282641 HNRNPCL1O60812 293 aaKnown RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 RPS6KA5O75582 802 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 PANK2Q9BZ23 570 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 GGA2Q9UJY4 613 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 ALDH3A1P30838 453 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 KRBA2Q6ZNG9 492 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 PHLDB2Q86SQ0 1253 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 TDRD7Q8NHU6 1098 aaKnown RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 GNL3LQ9NVN8 582 aaKnown RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 NMIQ13287 307 aaPredicted RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 TEX11Q8IYF3 940 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 HOOK2Q96ED9 719 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 MIS18AQ9NYP9 233 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 TRAK1Q9UPV9 953 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 HSF2BPO75031 334 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 FGFR1OPO95684 399 aaKnown RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 HDGFP51858 240 aaKnown RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 DEUP1Q05D60 604 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 SNCBQ16143 134 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 TBC1D31Q96DN5 1066 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 STX6O43752 255 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 CCDC92Q53HC0 331 aaPredicted RBP9.89□□□□□ -0.83
A1CF-201ENST00000282641 LRRC45Q96CN5 670 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 ARHGEF11O15085 1522 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 NEURL4Q96JN8 1562 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 TACC1O75410 805 aa9.89□□□□□ -0.83
A1CF-201ENST00000282641 USO1O60763 962 aaKnown RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 YEATS4O95619 227 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 TOP1P11387 765 aaKnown RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 RIPK4P57078 832 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 MEX3CQ5U5Q3 659 aaKnown RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 CTNNA3Q9UI47 895 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 CACNA1FO60840 1977 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 FBXO18Q8NFZ0 1043 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 HNRNPLLQ8WVV9 542 aaKnown RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 MAP3K21Q5TCX8 1036 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 ABCC1P33527 1531 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 PPP1R12BO60237 982 aaPredicted RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 TROVE2P10155 538 aaKnown RBP eCLIP9.88□□□□□ -0.83
A1CF-201ENST00000282641 KRT83P78385 493 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 GCFC2P16383 781 aaKnown RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 CHMP4BP1P59074 171 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 ANO2Q9NQ90 1003 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 RARSP54136 660 aaKnown RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 IQCGQ9H095 443 aaKnown RBP9.88□□□□□ -0.83
A1CF-201ENST00000282641 VPS36Q86VN1 386 aa9.88□□□□□ -0.83
A1CF-201ENST00000282641 ATP11AP98196 1134 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
A1CF-201ENST00000282641 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 RAB3IPQ96QF0 476 aaPredicted RBP9.87□□□□□ -0.83
A1CF-201ENST00000282641 SAMD15Q9P1V8 674 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 STIM2Q9P246 746 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 UNC13AQ9UPW8 1703 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 TEX9Q8N6V9 391 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 GJC2Q5T442 439 aaPredicted RBP9.87□□□□□ -0.83
A1CF-201ENST00000282641 TRIM7Q9C029 511 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
A1CF-201ENST00000282641 GSTA2P09210 222 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 PAFAH1B1P43034 410 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 ZNF280CQ8ND82 737 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 PIP4K2CQ8TBX8 421 aa9.87□□□□□ -0.83
A1CF-201ENST00000282641 TRAPPC8Q9Y2L5 1435 aa9.86□□□□□ -0.83
A1CF-201ENST00000282641 MAST1Q9Y2H9 1570 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms