RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 RASSF7Q02833 373 aa15.99■□□□□ 0.15
SGCE-201ENST00000265735 ZNF784Q8NCA9 323 aaPredicted RBP15.99■□□□□ 0.15
SGCE-201ENST00000265735 PTPRCP08575 1304 aa15.99■□□□□ 0.15
SGCE-201ENST00000265735 DICER1Q9UPY3 1922 aaKnown RBP15.99■□□□□ 0.15
SGCE-201ENST00000265735 LMNB1P20700 586 aa15.99■□□□□ 0.15
SGCE-201ENST00000265735 CCDC93Q567U6 631 aa15.99■□□□□ 0.15
SGCE-201ENST00000265735 C9orf131Q5VYM1 1079 aa15.99■□□□□ 0.15
SGCE-201ENST00000265735 CC2D2BQ6DHV5 1058 aa15.99■□□□□ 0.15
SGCE-201ENST00000265735 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
SGCE-201ENST00000265735 CRBNQ96SW2 442 aa15.99■□□□□ 0.15
SGCE-201ENST00000265735 MYH3P11055 1940 aa15.98■□□□□ 0.15
SGCE-201ENST00000265735 PDE8AO60658 829 aa15.98■□□□□ 0.15
SGCE-201ENST00000265735 BBOX1O75936 387 aa15.98■□□□□ 0.15
SGCE-201ENST00000265735 CASP7P55210 303 aa15.98■□□□□ 0.15
SGCE-201ENST00000265735 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
SGCE-201ENST00000265735 TSHZ2Q9NRE2 1034 aa15.98■□□□□ 0.15
SGCE-201ENST00000265735 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
SGCE-201ENST00000265735 GRAPQ13588 217 aa15.97■□□□□ 0.15
SGCE-201ENST00000265735 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
SGCE-201ENST00000265735 RTKN2Q8IZC4 609 aa15.97■□□□□ 0.15
SGCE-201ENST00000265735 GRAPLQ8TC17 118 aaPredicted RBP15.97■□□□□ 0.15
SGCE-201ENST00000265735 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
SGCE-201ENST00000265735 TAOK3Q9H2K8 898 aa15.97■□□□□ 0.15
SGCE-201ENST00000265735 RARSP54136 660 aaKnown RBP15.96■□□□□ 0.15
SGCE-201ENST00000265735 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
SGCE-201ENST00000265735 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
SGCE-201ENST00000265735 ATP6V0A2Q9Y487 856 aa15.96■□□□□ 0.15
SGCE-201ENST00000265735 COL4A1P02462 1669 aa15.96■□□□□ 0.15
SGCE-201ENST00000265735 BCAR3O75815 825 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 ALDH1L1O75891 902 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 FKBP4Q02790 459 aaKnown RBP eCLIP15.95■□□□□ 0.14
SGCE-201ENST00000265735 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 UBE3BQ7Z3V4 1068 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 PLA2G12BQ9BX93 195 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 LRRC37AA6NMS7 1700 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 C20orf194Q5TEA3 1177 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 SP8Q8IXZ3 490 aa15.95■□□□□ 0.14
SGCE-201ENST00000265735 ZC3H4Q9UPT8 1303 aaKnown RBP15.95■□□□□ 0.14
SGCE-201ENST00000265735 TMC4Q7Z404 712 aa15.94■□□□□ 0.14
SGCE-201ENST00000265735 SLC51AQ86UW1 340 aa15.94■□□□□ 0.14
SGCE-201ENST00000265735 TTLL11Q8NHH1 800 aa15.94■□□□□ 0.14
SGCE-201ENST00000265735 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
SGCE-201ENST00000265735 PSMD1Q99460 953 aa15.94■□□□□ 0.14
SGCE-201ENST00000265735 SRCIN1Q9C0H9 1055 aa15.94■□□□□ 0.14
SGCE-201ENST00000265735 TIAM2Q8IVF5 1701 aa15.94■□□□□ 0.14
SGCE-201ENST00000265735 CTSWP56202 376 aa15.93■□□□□ 0.14
SGCE-201ENST00000265735 PDE3AQ14432 1141 aa15.93■□□□□ 0.14
SGCE-201ENST00000265735 CCDC152Q4G0S7 254 aa15.93■□□□□ 0.14
SGCE-201ENST00000265735 SLC4A10Q6U841 1118 aa15.93■□□□□ 0.14
SGCE-201ENST00000265735 NOB1Q9ULX3 412 aaKnown RBP15.92■□□□□ 0.14
SGCE-201ENST00000265735 RTL9Q8NET4 1388 aa15.92■□□□□ 0.14
SGCE-201ENST00000265735 GRM8O00222 908 aa15.92■□□□□ 0.14
SGCE-201ENST00000265735 CSF1RP07333 972 aa15.92■□□□□ 0.14
SGCE-201ENST00000265735 RPS8P62241 208 aaKnown RBP15.92■□□□□ 0.14
SGCE-201ENST00000265735 SEC31BQ9NQW1 1179 aa15.92■□□□□ 0.14
SGCE-201ENST00000265735 UTYO14607 1347 aa15.91■□□□□ 0.14
SGCE-201ENST00000265735 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
SGCE-201ENST00000265735 RTFDC1Q9BY42 306 aaPredicted RBP15.91■□□□□ 0.14
SGCE-201ENST00000265735 ARHGAP45Q92619 1136 aa15.9■□□□□ 0.14
SGCE-201ENST00000265735 TMX4Q9H1E5 349 aaPredicted RBP15.9■□□□□ 0.14
SGCE-201ENST00000265735 ZNF277Q9NRM2 450 aaPredicted RBP15.9■□□□□ 0.14
SGCE-201ENST00000265735 LTBP1Q14766 1721 aa15.9■□□□□ 0.14
SGCE-201ENST00000265735 KIF16BQ96L93 1317 aa15.89■□□□□ 0.14
SGCE-201ENST00000265735 IARSP41252 1262 aaKnown RBP15.89■□□□□ 0.13
SGCE-201ENST00000265735 FOXO4P98177 505 aa15.89■□□□□ 0.13
SGCE-201ENST00000265735 CCDC85AQ96PX6 553 aaPredicted RBP15.89■□□□□ 0.13
SGCE-201ENST00000265735 GREM2Q9H772 168 aa15.89■□□□□ 0.13
SGCE-201ENST00000265735 C9orf78Q9NZ63 289 aaPredicted RBP15.89■□□□□ 0.13
SGCE-201ENST00000265735 MPNDQ8N594 471 aa15.89■□□□□ 0.13
SGCE-201ENST00000265735 API5Q9BZZ5 524 aaKnown RBP15.89■□□□□ 0.13
SGCE-201ENST00000265735 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
SGCE-201ENST00000265735 DUOX1Q9NRD9 1551 aa15.89■□□□□ 0.13
SGCE-201ENST00000265735 NBPF7P0C2Y1 421 aaPredicted RBP15.88■□□□□ 0.13
SGCE-201ENST00000265735 GPBP1L1Q9HC44 474 aaPredicted RBP15.88■□□□□ 0.13
SGCE-201ENST00000265735 COL4A5P29400 1685 aa15.88■□□□□ 0.13
SGCE-201ENST00000265735 GLTPD2A6NH11 291 aa15.87■□□□□ 0.13
SGCE-201ENST00000265735 MS4A1P11836 297 aa15.87■□□□□ 0.13
SGCE-201ENST00000265735 EPHA10Q5JZY3 1008 aa15.87■□□□□ 0.13
SGCE-201ENST00000265735 DPP8Q6V1X1 898 aaPredicted RBP15.87■□□□□ 0.13
SGCE-201ENST00000265735 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
SGCE-201ENST00000265735 ZNF526Q8TF50 670 aaPredicted RBP15.87■□□□□ 0.13
SGCE-201ENST00000265735 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
SGCE-201ENST00000265735 KAZALD1Q96I82 304 aa15.87■□□□□ 0.13
SGCE-201ENST00000265735 CDC5LQ99459 802 aaKnown RBP15.87■□□□□ 0.13
SGCE-201ENST00000265735 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
SGCE-201ENST00000265735 SUPT20HQ8NEM7 779 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 PODXL2Q9NZ53 605 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 SPEF2Q9C093 1822 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 FZD9O00144 591 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 ITGA6P23229 1130 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 CCT4P50991 539 aaKnown RBP15.86■□□□□ 0.13
SGCE-201ENST00000265735 AAMPQ13685 434 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 FAM161AQ3B820 660 aa15.86■□□□□ 0.13
SGCE-201ENST00000265735 BSDC1Q9NW68 430 aaPredicted RBP15.86■□□□□ 0.13
SGCE-201ENST00000265735 IPO8O15397 1037 aaKnown RBP15.85■□□□□ 0.13
SGCE-201ENST00000265735 GPSM2P81274 684 aa15.85■□□□□ 0.13
SGCE-201ENST00000265735 SUCLG2Q96I99 432 aa15.85■□□□□ 0.13
SGCE-201ENST00000265735 NSFL1CQ9UNZ2 370 aaKnown RBP15.85■□□□□ 0.13
SGCE-201ENST00000265735 KIF3CO14782 793 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms