RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SUCLG2Q96I99 432 aa17.94■□□□□ 0.46
SSBP1-201ENST00000265304 TAF1P21675 1872 aa17.94■□□□□ 0.46
SSBP1-201ENST00000265304 CTSWP56202 376 aa17.93■□□□□ 0.46
SSBP1-201ENST00000265304 STYK1Q6J9G0 422 aa17.93■□□□□ 0.46
SSBP1-201ENST00000265304 ANKRD44Q8N8A2 993 aa17.93■□□□□ 0.46
SSBP1-201ENST00000265304 CRAMP1Q96RY5 1269 aa17.93■□□□□ 0.46
SSBP1-201ENST00000265304 GNAI2P04899 355 aa17.92■□□□□ 0.46
SSBP1-201ENST00000265304 NPR1P16066 1061 aa17.92■□□□□ 0.46
SSBP1-201ENST00000265304 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
SSBP1-201ENST00000265304 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
SSBP1-201ENST00000265304 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
SSBP1-201ENST00000265304 ARFGEF1Q9Y6D6 1849 aa17.91■□□□□ 0.46
SSBP1-201ENST00000265304 H0YIN7 160 aa17.91■□□□□ 0.46
SSBP1-201ENST00000265304 MASTLQ96GX5 879 aa17.91■□□□□ 0.46
SSBP1-201ENST00000265304 FHDC1Q9C0D6 1143 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-201ENST00000265304 BICC1Q9H694 974 aaKnown RBP17.91■□□□□ 0.46
SSBP1-201ENST00000265304 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
SSBP1-201ENST00000265304 NPHP1O15259 732 aa17.9■□□□□ 0.46
SSBP1-201ENST00000265304 CCDC152Q4G0S7 254 aa17.9■□□□□ 0.46
SSBP1-201ENST00000265304 LRRFIP2Q9Y608 721 aaKnown RBP17.9■□□□□ 0.46
SSBP1-201ENST00000265304 DPEP1P16444 411 aa17.89■□□□□ 0.45
SSBP1-201ENST00000265304 LMBR1LQ6UX01 489 aa17.89■□□□□ 0.45
SSBP1-201ENST00000265304 C2CD5Q86YS7 1000 aa17.89■□□□□ 0.45
SSBP1-201ENST00000265304 ALDH1B1P30837 517 aa17.88■□□□□ 0.45
SSBP1-201ENST00000265304 ATP8B2P98198 1209 aa17.88■□□□□ 0.45
SSBP1-201ENST00000265304 C7orf43Q8WVR3 580 aa17.88■□□□□ 0.45
SSBP1-201ENST00000265304 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
SSBP1-201ENST00000265304 LRRC37AA6NMS7 1700 aa17.87■□□□□ 0.45
SSBP1-201ENST00000265304 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
SSBP1-201ENST00000265304 BBOX1O75936 387 aa17.87■□□□□ 0.45
SSBP1-201ENST00000265304 CHRNA5P30532 468 aa17.87■□□□□ 0.45
SSBP1-201ENST00000265304 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-201ENST00000265304 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
SSBP1-201ENST00000265304 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
SSBP1-201ENST00000265304 RBM17Q96I25 401 aaKnown RBP17.87■□□□□ 0.45
SSBP1-201ENST00000265304 GREM2Q9H772 168 aa17.87■□□□□ 0.45
SSBP1-201ENST00000265304 COL4A1P02462 1669 aa17.87■□□□□ 0.45
SSBP1-201ENST00000265304 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
SSBP1-201ENST00000265304 POLA2Q14181 598 aa17.86■□□□□ 0.45
SSBP1-201ENST00000265304 TMC4Q7Z404 712 aa17.86■□□□□ 0.45
SSBP1-201ENST00000265304 NLGN2Q8NFZ4 835 aa17.86■□□□□ 0.45
SSBP1-201ENST00000265304 SSH3Q8TE77 659 aa17.86■□□□□ 0.45
SSBP1-201ENST00000265304 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
SSBP1-201ENST00000265304 PPP1R1BQ9UD71 204 aaPredicted RBP17.86■□□□□ 0.45
SSBP1-201ENST00000265304 RPS8P62241 208 aaKnown RBP17.85■□□□□ 0.45
SSBP1-201ENST00000265304 GRAPQ13588 217 aa17.85■□□□□ 0.45
SSBP1-201ENST00000265304 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
SSBP1-201ENST00000265304 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
SSBP1-201ENST00000265304 GRAPLQ8TC17 118 aaPredicted RBP17.85■□□□□ 0.45
SSBP1-201ENST00000265304 RPGRQ92834 1020 aaKnown RBP17.85■□□□□ 0.45
SSBP1-201ENST00000265304 COPRSQ9NQ92 184 aa17.85■□□□□ 0.45
SSBP1-201ENST00000265304 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
SSBP1-201ENST00000265304 SNED1Q8TER0 1413 aa17.84■□□□□ 0.45
SSBP1-201ENST00000265304 ITGA6P23229 1130 aa17.84■□□□□ 0.45
SSBP1-201ENST00000265304 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
SSBP1-201ENST00000265304 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
SSBP1-201ENST00000265304 SIRT2Q8IXJ6 389 aa17.84■□□□□ 0.45
SSBP1-201ENST00000265304 TTLL6Q8N841 843 aa17.84■□□□□ 0.45
SSBP1-201ENST00000265304 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
SSBP1-201ENST00000265304 FER1L6Q2WGJ9 1857 aa17.84■□□□□ 0.45
SSBP1-201ENST00000265304 PTPN12Q05209 780 aaKnown RBP17.83■□□□□ 0.44
SSBP1-201ENST00000265304 EXOC6Q8TAG9 804 aa17.83■□□□□ 0.44
SSBP1-201ENST00000265304 CELF1Q92879 486 aaKnown RBP17.83■□□□□ 0.44
SSBP1-201ENST00000265304 CDC5LQ99459 802 aaKnown RBP17.83■□□□□ 0.44
SSBP1-201ENST00000265304 BSDC1Q9NW68 430 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-201ENST00000265304 LTBP1Q14766 1721 aa17.83■□□□□ 0.44
SSBP1-201ENST00000265304 A0A1B0GUL6 1792 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 PNMA6EA0A0J9YXQ4 647 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 ANKRD18BA2A2Z9 1011 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 CCDC57Q2TAC2 916 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 CC2D2BQ6DHV5 1058 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 SP8Q8IXZ3 490 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
SSBP1-201ENST00000265304 PCDHB15Q9Y5E8 787 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 SPEF2Q9C093 1822 aa17.82■□□□□ 0.44
SSBP1-201ENST00000265304 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
SSBP1-201ENST00000265304 GRIPAP1Q4V328 841 aa17.81■□□□□ 0.44
SSBP1-201ENST00000265304 DALRD3Q5D0E6 543 aaKnown RBP17.81■□□□□ 0.44
SSBP1-201ENST00000265304 PRPF40BQ6NWY9 871 aaKnown RBP17.81■□□□□ 0.44
SSBP1-201ENST00000265304 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
SSBP1-201ENST00000265304 SRGAP3O43295 1099 aa17.8■□□□□ 0.44
SSBP1-201ENST00000265304 CIAO1O76071 339 aa17.8■□□□□ 0.44
SSBP1-201ENST00000265304 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
SSBP1-201ENST00000265304 ZNF622Q969S3 477 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSBP1-201ENST00000265304 C1orf115Q9H7X2 142 aa17.8■□□□□ 0.44
SSBP1-201ENST00000265304 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
SSBP1-201ENST00000265304 ANKRD18AQ8IVF6 992 aa17.79■□□□□ 0.44
SSBP1-201ENST00000265304 HDAC1Q13547 482 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-201ENST00000265304 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
SSBP1-201ENST00000265304 PODXL2Q9NZ53 605 aa17.78■□□□□ 0.44
SSBP1-201ENST00000265304 EYA2O00167 538 aa17.77■□□□□ 0.44
SSBP1-201ENST00000265304 HMMRO75330 724 aa17.77■□□□□ 0.44
SSBP1-201ENST00000265304 IGHMBP2P38935 993 aaKnown RBP17.77■□□□□ 0.44
SSBP1-201ENST00000265304 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
SSBP1-201ENST00000265304 ATG9AQ7Z3C6 839 aa17.77■□□□□ 0.44
SSBP1-201ENST00000265304 MINPP1Q9UNW1 487 aa17.77■□□□□ 0.44
SSBP1-201ENST00000265304 SBF1O95248 1867 aa17.77■□□□□ 0.43
SSBP1-201ENST00000265304 PPEF1O14829 653 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-201ENST00000265304 LDHAL6AQ6ZMR3 332 aa17.76■□□□□ 0.43
SSBP1-201ENST00000265304 KLHL34Q8N239 644 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms