RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 NMIQ13287 307 aaPredicted RBP15.66■□□□□ 0.1
TCF3-201ENST00000262965 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 HMG20BQ9P0W2 317 aa15.66■□□□□ 0.1
TCF3-201ENST00000262965 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 CWF19L2Q2TBE0 894 aaKnown RBP15.65■□□□□ 0.1
TCF3-201ENST00000262965 SMARCC1Q92922 1105 aaPredicted RBP15.65■□□□□ 0.1
TCF3-201ENST00000262965 CCDC113Q9H0I3 377 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 TTC21BQ7Z4L5 1316 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 IDEP14735 1019 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
TCF3-201ENST00000262965 ZSCAN29Q8IWY8 852 aaPredicted RBP15.65■□□□□ 0.1
TCF3-201ENST00000262965 ZNF397Q8NF99 534 aaPredicted RBP15.65■□□□□ 0.1
TCF3-201ENST00000262965 CAVIN2O95810 425 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 AFMP43652 599 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 COPS6Q7L5N1 327 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 IQCA1Q86XH1 822 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 MKNK2Q9HBH9 465 aa15.65■□□□□ 0.1
TCF3-201ENST00000262965 MRPS27Q92552 414 aaKnown RBP15.64■□□□□ 0.1
TCF3-201ENST00000262965 NUTM2BA6NNL0 878 aaPredicted RBP15.64■□□□□ 0.09
TCF3-201ENST00000262965 NUTM2EB1AL46 878 aaPredicted RBP15.64■□□□□ 0.09
TCF3-201ENST00000262965 N4BP3O15049 544 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 NLRP5P59047 1200 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 ANKRD13DQ6ZTN6 518 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 NUTM2AQ8IVF1 878 aaPredicted RBP15.64■□□□□ 0.09
TCF3-201ENST00000262965 NPHP3Q7Z494 1330 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 XAGE3Q8WTP9 111 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 CHAMP1Q96JM3 812 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 ANKRD62A6NC57 917 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 TSC1Q92574 1164 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 UBA5Q9GZZ9 404 aa15.64■□□□□ 0.09
TCF3-201ENST00000262965 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.63■□□□□ 0.098e-7■■■■■ 184.1
TCF3-201ENST00000262965 ARHGEF5Q12774 1597 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 YEATS4O95619 227 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 FKBP15Q5T1M5 1219 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 NCOA7Q8NI08 942 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 CCDC171Q6TFL3 1326 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 SHTN1A0MZ66 631 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 MTIF2P46199 727 aaKnown RBP15.63■□□□□ 0.09
TCF3-201ENST00000262965 MAP9Q49MG5 647 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 FAM107BQ9H098 131 aa15.63■□□□□ 0.09
TCF3-201ENST00000262965 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
TCF3-201ENST00000262965 RBM5P52756 815 aaKnown RBP eCLIP15.62■□□□□ 0.09
TCF3-201ENST00000262965 HS1BP3Q53T59 392 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 CCDC150Q8NCX0 1101 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 BCCIPQ9P287 314 aaKnown RBP eCLIP15.62■□□□□ 0.09
TCF3-201ENST00000262965 PIK3C2GO75747 1445 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 CCDC194A0A1B0GVG4 234 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 GRM8O00222 908 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 TMEM132AQ24JP5 1023 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 TXLNBQ8N3L3 684 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 ALG1Q9BT22 464 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 IQSEC3Q9UPP2 1182 aaPredicted RBP15.62■□□□□ 0.09
TCF3-201ENST00000262965 NEO1Q92859 1461 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 HLTFQ14527 1009 aaKnown RBP eCLIP15.62■□□□□ 0.09
TCF3-201ENST00000262965 TMOD3Q9NYL9 352 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 USP8P40818 1118 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 CREB3L3Q68CJ9 461 aa15.62■□□□□ 0.09
TCF3-201ENST00000262965 APOBRQ0VD83 1088 aa15.61■□□□□ 0.09
TCF3-201ENST00000262965 CHRNA2Q15822 529 aa15.61■□□□□ 0.09
TCF3-201ENST00000262965 SLU7O95391 586 aaKnown RBP15.61■□□□□ 0.09
TCF3-201ENST00000262965 JADE2Q9NQC1 790 aa15.61■□□□□ 0.09
TCF3-201ENST00000262965 SEPT7Q16181 437 aaKnown RBP15.61■□□□□ 0.09
TCF3-201ENST00000262965 RNF187Q5TA31 235 aaPredicted RBP15.61■□□□□ 0.09
TCF3-201ENST00000262965 INTS4Q96HW7 963 aaKnown RBP15.61■□□□□ 0.09
TCF3-201ENST00000262965 ARFGAP3Q9NP61 516 aa15.61■□□□□ 0.09
TCF3-201ENST00000262965 GADD45BO75293 160 aaPredicted RBP15.6■□□□□ 0.09
TCF3-201ENST00000262965 SYT10Q6XYQ8 523 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 IFNKQ9P0W0 207 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 SPECC1Q5M775 1068 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 TRMT1LQ7Z2T5 733 aaKnown RBP15.6■□□□□ 0.09
TCF3-201ENST00000262965 IPO4Q8TEX9 1081 aaKnown RBP15.6■□□□□ 0.09
TCF3-201ENST00000262965 RIMS2Q9UQ26 1411 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 SBNO2Q9Y2G9 1366 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 PHACTR2O75167 634 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 UBA7P41226 1012 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 SSR1P43307 286 aaKnown RBP15.6■□□□□ 0.09
TCF3-201ENST00000262965 MEX3CQ5U5Q3 659 aaKnown RBP15.6■□□□□ 0.09
TCF3-201ENST00000262965 DRC1Q96MC2 740 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 MAST1Q9Y2H9 1570 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 ANKRD18BA2A2Z9 1011 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 ZNF76P36508 570 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 VAT1LQ9HCJ6 419 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 CWC25Q9NXE8 425 aaPredicted RBP15.6■□□□□ 0.09
TCF3-201ENST00000262965 TMEM63CQ9P1W3 806 aa15.6■□□□□ 0.09
TCF3-201ENST00000262965 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 GOLGA6L7A0A1B0GV03 622 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 RXRAP19793 462 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 MCMDC2Q4G0Z9 681 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 CCDC178Q5BJE1 867 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.59■□□□□ 0.09
TCF3-201ENST00000262965 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 ATP10AO60312 1499 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 MYO1BO43795 1136 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 PKP1Q13835 747 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 KARSQ15046 597 aaKnown RBP15.59■□□□□ 0.09
TCF3-201ENST00000262965 CTR9Q6PD62 1173 aa15.59■□□□□ 0.09
TCF3-201ENST00000262965 U2AF2P26368 475 aaKnown RBP eCLIP15.59■□□□□ 0.097e-7■■□□□ 12.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms