RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PPP2R5BQ15173 497 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 ATL3Q6DD88 541 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 FLAD1Q8NFF5 587 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 MTMR7Q9Y216 660 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 PDE8AO60658 829 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 NBPF7P0C2Y1 421 aaPredicted RBP9.74□□□□□ -0.85
PTPN3-201ENST00000262539 GNAT2P19087 354 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 MAP3K12Q12852 859 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 CCDC178Q5BJE1 867 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 SLC3A2P08195 630 aaKnown RBP9.74□□□□□ -0.85
PTPN3-201ENST00000262539 MRE11P49959 708 aa9.74□□□□□ -0.85
PTPN3-201ENST00000262539 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 SLC39A6Q13433 755 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 ANKRD2Q9GZV1 360 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 SEMA3EO15041 775 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 SIRT2Q8IXJ6 389 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 LDHAL6AQ6ZMR3 332 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 KBTBD3Q8NAB2 608 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 ERICH2A1L162 156 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 TTC39AQ5SRH9 613 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 PAXIP1Q6ZW49 1069 aaPredicted RBP9.73□□□□□ -0.85
PTPN3-201ENST00000262539 ZGPATQ8N5A5 531 aaKnown RBP9.73□□□□□ -0.85
PTPN3-201ENST00000262539 SCAND2PQ9GZW5 306 aaPredicted RBP9.73□□□□□ -0.85
PTPN3-201ENST00000262539 MROH5Q6ZUA9 1318 aa9.73□□□□□ -0.85
PTPN3-201ENST00000262539 METTL24Q5JXM2 366 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 SLF2Q8IX21 1173 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 CCDC47Q96A33 483 aaKnown RBP9.72□□□□□ -0.85
PTPN3-201ENST00000262539 ISCA1Q9BUE6 129 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 ZNF287Q9HBT7 754 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 RBM27Q9P2N5 1060 aaKnown RBP9.72□□□□□ -0.85
PTPN3-201ENST00000262539 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 NALCNQ8IZF0 1738 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 CCDC196A0A1B0GTZ2 297 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 HSPA4P34932 840 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 SPTY2D1Q68D10 685 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-201ENST00000262539 MCTP1Q6DN14 999 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 WASF1Q92558 559 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 ARID3AQ99856 593 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 UTP14AQ9BVJ6 771 aaKnown RBP9.72□□□□□ -0.85
PTPN3-201ENST00000262539 TMTC2Q8N394 836 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 ZBTB38Q8NAP3 1195 aaPredicted RBP9.72□□□□□ -0.85
PTPN3-201ENST00000262539 IMMTQ16891 758 aaKnown RBP9.72□□□□□ -0.85
PTPN3-201ENST00000262539 CCDC171Q6TFL3 1326 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 DDX49Q9Y6V7 483 aaKnown RBP9.72□□□□□ -0.85
PTPN3-201ENST00000262539 CPLX1O14810 134 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 TPTE2Q6XPS3 522 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 JMYQ8N9B5 988 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 AKAP12Q02952 1782 aa9.72□□□□□ -0.85
PTPN3-201ENST00000262539 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.85
PTPN3-201ENST00000262539 UNC5CLQ8IV45 518 aa9.71□□□□□ -0.85
PTPN3-201ENST00000262539 DNAJC10Q8IXB1 793 aa9.71□□□□□ -0.85
PTPN3-201ENST00000262539 PXDNQ92626 1479 aa9.71□□□□□ -0.85
PTPN3-201ENST00000262539 ADCY9O60503 1353 aa9.71□□□□□ -0.85
PTPN3-201ENST00000262539 TNNI3KQ59H18 835 aa9.71□□□□□ -0.85
PTPN3-201ENST00000262539 FPGT-TNNI3KV9GXZ4 949 aa9.71□□□□□ -0.85
PTPN3-201ENST00000262539 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.85
PTPN3-201ENST00000262539 IL17RAQ96F46 866 aa9.71□□□□□ -0.86
PTPN3-201ENST00000262539 PNMA6EA0A0J9YXQ4 647 aa9.71□□□□□ -0.86
PTPN3-201ENST00000262539 VPS72Q15906 364 aa9.71□□□□□ -0.86
PTPN3-201ENST00000262539 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
PTPN3-201ENST00000262539 SUCLG2Q96I99 432 aa9.71□□□□□ -0.86
PTPN3-201ENST00000262539 PDRG1Q9NUG6 133 aa9.71□□□□□ -0.86
PTPN3-201ENST00000262539 PCP11498 1178 aaKnown RBP9.7□□□□□ -0.86
PTPN3-201ENST00000262539 MCMDC2Q4G0Z9 681 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 DSCC1Q9BVC3 393 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 TRPC5Q9UL62 973 aaPredicted RBP9.7□□□□□ -0.86
PTPN3-201ENST00000262539 XBP1P17861 261 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 ZPR1O75312 459 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 CAVIN4Q5BKX8 364 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 CNNM2Q9H8M5 875 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 COL5A2P05997 1499 aaPredicted RBP9.7□□□□□ -0.86
PTPN3-201ENST00000262539 CWF19L2Q2TBE0 894 aaKnown RBP9.7□□□□□ -0.86
PTPN3-201ENST00000262539 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 USP54Q70EL1 1684 aa9.7□□□□□ -0.86
PTPN3-201ENST00000262539 PATL2C9JE40 543 aaKnown RBP9.7□□□□□ -0.86
PTPN3-201ENST00000262539 IBSPP21815 317 aaPredicted RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 KLHL40Q2TBA0 621 aa9.69□□□□□ -0.86
PTPN3-201ENST00000262539 KRT85P78386 507 aa9.69□□□□□ -0.86
PTPN3-201ENST00000262539 WASHC4Q2M389 1173 aa9.69□□□□□ -0.86
PTPN3-201ENST00000262539 ZNF512BQ96KM6 892 aaPredicted RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 ZNF396Q96N95 335 aaPredicted RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 LLPHQ9BRT6 129 aaKnown RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 PRKCSHP14314 528 aaPredicted RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 SAFBQ15424 915 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 CT47A1Q5JQC4 288 aaPredicted RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 LPIN2Q92539 896 aa9.69□□□□□ -0.86
PTPN3-201ENST00000262539 ALDH8A1Q9H2A2 487 aaPredicted RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 RNF113AO15541 343 aaKnown RBP9.69□□□□□ -0.86
PTPN3-201ENST00000262539 TPM1P09493 284 aa9.69□□□□□ -0.86
PTPN3-201ENST00000262539 CFAP45Q9UL16 551 aa9.69□□□□□ -0.86
PTPN3-201ENST00000262539 MYO5BQ9ULV0 1848 aa9.69□□□□□ -0.86
PTPN3-201ENST00000262539 IRS4O14654 1257 aaPredicted RBP9.68□□□□□ -0.86
PTPN3-201ENST00000262539 PHRF1Q9P1Y6 1649 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms