RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 NEMFO60524 1076 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 PSMC4P43686 418 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 ORC3Q9UBD5 711 aaPredicted RBP16.34■□□□□ 0.21
CUX2-201ENST00000261726 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
CUX2-201ENST00000261726 MAP3K9P80192 1104 aa16.33■□□□□ 0.21
CUX2-201ENST00000261726 IFI16Q16666 785 aaKnown RBP16.33■□□□□ 0.21
CUX2-201ENST00000261726 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.21
CUX2-201ENST00000261726 NDC80O14777 642 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 AKR1B10O60218 316 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 RRAGBQ5VZM2 374 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 ZBTB9Q96C00 473 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 CFAP57Q96MR6 1250 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
CUX2-201ENST00000261726 UGGT2Q9NYU1 1516 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 TIGD1Q96MW7 591 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 NBPF8Q3BBV2 869 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 MAP3K2Q9Y2U5 619 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
CUX2-201ENST00000261726 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
CUX2-201ENST00000261726 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.2
CUX2-201ENST00000261726 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.2
CUX2-201ENST00000261726 KRT13P13646 458 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 ATP5J2-PTCD1G3V325 749 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 ZWINTO95229 277 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 BAG3O95817 575 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 TTF1Q15361 905 aaPredicted RBP16.32■□□□□ 0.2
CUX2-201ENST00000261726 CCDC184Q52MB2 194 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 CCDC102BQ68D86 513 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 GSTA5Q7RTV2 222 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 LRRC45Q96CN5 670 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
CUX2-201ENST00000261726 ZHX1Q9UKY1 873 aaPredicted RBP16.32■□□□□ 0.2
CUX2-201ENST00000261726 KIF4AO95239 1232 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 ZNF165P49910 485 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 LDHAL6AQ6ZMR3 332 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 GOLGA6L9A6NEM1 432 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 KANK3Q6NY19 840 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
CUX2-201ENST00000261726 PTGS1P23219 599 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 MNAT1P51948 309 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
CUX2-201ENST00000261726 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 STX8Q9UNK0 236 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 NAIPQ13075 1403 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 HSPA4P34932 840 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 HYPKQ9NX55 129 aa16.31■□□□□ 0.2
CUX2-201ENST00000261726 CCDC172P0C7W6 258 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 STAT6P42226 847 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
CUX2-201ENST00000261726 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
CUX2-201ENST00000261726 C20orf194Q5TEA3 1177 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 FAM212AQ96EL1 285 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 ARID5AQ03989 594 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 DAAM2Q86T65 1068 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
CUX2-201ENST00000261726 TSPY3P0CV98 308 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 TSPY8P0CW00 308 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 UBASH3AP57075 661 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 PYM1Q9BRP8 204 aaKnown RBP16.29■□□□□ 0.2
CUX2-201ENST00000261726 F8W031 263 aaPredicted RBP16.29■□□□□ 0.2
CUX2-201ENST00000261726 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 AMOTQ4VCS5 1084 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 LDHCP07864 332 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 CDC5LQ99459 802 aaKnown RBP16.29■□□□□ 0.2
CUX2-201ENST00000261726 GIMAP6Q6P9H5 292 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 SELENOSQ9BQE4 189 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 NSRP1Q9H0G5 558 aaKnown RBP16.29■□□□□ 0.2
CUX2-201ENST00000261726 RASAL2Q9UJF2 1139 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 KIAA1107Q9UPP5 1409 aa16.29■□□□□ 0.2
CUX2-201ENST00000261726 RMND1Q9NWS8 449 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 SYKP43405 635 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 CCDC50Q8IVM0 306 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 ZNF830Q96NB3 372 aaPredicted RBP16.28■□□□□ 0.2
CUX2-201ENST00000261726 ERMNQ8TAM6 284 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 RARSP54136 660 aaKnown RBP16.28■□□□□ 0.2
CUX2-201ENST00000261726 ALDH1L2Q3SY69 923 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 SELENOOQ9BVL4 669 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 SMIM23A6NLE4 172 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 NME9Q86XW9 330 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 DDX12PQ92771 950 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 ABCC5O15440 1437 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 CFAP58Q5T655 872 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 TBC1D2Q9BYX2 928 aa16.28■□□□□ 0.2
CUX2-201ENST00000261726 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
CUX2-201ENST00000261726 NUP153P49790 1475 aaKnown RBP16.27■□□□□ 0.2
CUX2-201ENST00000261726 CRNKL1Q9BZJ0 848 aaKnown RBP16.27■□□□□ 0.2
CUX2-201ENST00000261726 CWC25Q9NXE8 425 aaPredicted RBP16.27■□□□□ 0.2
CUX2-201ENST00000261726 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.2
CUX2-201ENST00000261726 CCDC61Q9Y6R9 512 aa16.27■□□□□ 0.2
CUX2-201ENST00000261726 CEP170Q5SW79 1584 aa16.27■□□□□ 0.2
CUX2-201ENST00000261726 MSL1Q68DK7 614 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms