RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GYS1P13807 737 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 GCKRQ14397 625 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 DBNLQ9UJU6 430 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 MED23Q9ULK4 1368 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 CAP1Q01518 475 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 ZNF530Q6P9A1 599 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 ATRNL1Q5VV63 1379 aa7.43□□□□□ -1.22
TOPBP1-201ENST00000260810 ERVV-2B6SEH9 535 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 EGFRP00533 1210 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 ZCRB1Q8TBF4 217 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 COPS6Q7L5N1 327 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 BICC1Q9H694 974 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 ATG2AQ2TAZ0 1938 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 TRIM28Q13263 835 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 RASEFQ8IZ41 740 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 BABAM1Q9NWV8 329 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 PLXNA1Q9UIW2 1896 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 NFIXQ14938 502 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 STOX1Q6ZVD7 989 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 NLRP10Q86W26 655 aa7.42□□□□□ -1.22
TOPBP1-201ENST00000260810 TRPM7Q96QT4 1865 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 UBAP1LF5GYI3 381 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 XAGE3Q8WTP9 111 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 DCHS2Q6V1P9 2916 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 VEGFAP15692 232 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 KCNB2Q92953 911 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 C10orf71Q711Q0 1435 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 ZNF589Q86UQ0 364 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 CCDC24Q8N4L8 307 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 SEC31BQ9NQW1 1179 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 ZNF804BA4D1E1 1349 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 DEFB132Q7Z7B7 95 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 TTLL11Q8NHH1 800 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 PDZRN3Q9UPQ7 1066 aa7.41□□□□□ -1.22
TOPBP1-201ENST00000260810 IL6STP40189 918 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-201ENST00000260810 CRKLP46109 303 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-201ENST00000260810 KIAA1217Q5T5P2 1943 aa7.4□□□□□ -1.22
TOPBP1-201ENST00000260810 SEPT12Q8IYM1 358 aa7.4□□□□□ -1.22
TOPBP1-201ENST00000260810 SENP2Q9HC62 589 aa7.4□□□□□ -1.22
TOPBP1-201ENST00000260810 COL23A1Q86Y22 540 aaPredicted RBP7.4□□□□□ -1.23
TOPBP1-201ENST00000260810 DSPP15924 2871 aaKnown RBP7.4□□□□□ -1.23
TOPBP1-201ENST00000260810 POLRMTO00411 1230 aaKnown RBP7.4□□□□□ -1.23
TOPBP1-201ENST00000260810 ADORA1P30542 326 aa7.4□□□□□ -1.23
TOPBP1-201ENST00000260810 C8orf37Q96NL8 207 aa7.4□□□□□ -1.23
TOPBP1-201ENST00000260810 STAP2Q9UGK3 403 aa7.4□□□□□ -1.23
TOPBP1-201ENST00000260810 RBM19Q9Y4C8 960 aaKnown RBP7.4□□□□□ -1.23
TOPBP1-201ENST00000260810 RTL9Q8NET4 1388 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 HDGFP51858 240 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 CDAN1Q8IWY9 1227 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 PCDH11XQ9BZA7 1347 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 PCDH11YQ9BZA8 1340 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 LOC102724428A0A0B4J2F2 783 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 LARGE1O95461 756 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 SIK1P57059 783 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 ARHGEF1Q92888 912 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 STRN4Q9NRL3 753 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 CRYBG3Q68DQ2 2970 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 ATP5J2-PTCD1G3V325 749 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 PTCD1O75127 700 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 HOXB7P09629 217 aa7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-201ENST00000260810 SEC62Q99442 399 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 PRDM11Q9NQV5 511 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 BTBD11A6QL63 1104 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 VSIG10Q8N0Z9 540 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 INCENPQ9NQS7 918 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 POTEIP0CG38 1075 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 VPS53Q5VIR6 699 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 MAP3K2Q9Y2U5 619 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 RRP1BQ14684 758 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 RASGRP2Q7LDG7 609 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 GREM2Q9H772 168 aa7.38□□□□□ -1.23
TOPBP1-201ENST00000260810 AMPHP49418 695 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 ADCK5Q3MIX3 580 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 MCM3APO60318 1980 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 CYP2E1P05181 493 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 PLA2G12BQ9BX93 195 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 CNTNAP4Q9C0A0 1308 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 SHTN1A0MZ66 631 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 THRAP3Q9Y2W1 955 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 POTECB2RU33 542 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 WNT7AO00755 349 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 IFNL2Q8IZJ0 200 aa7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 CELF1Q92879 486 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 P2RX7Q99572 595 aaKnown RBP7.37□□□□□ -1.23
TOPBP1-201ENST00000260810 PTH1RQ03431 593 aa7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 DLK2Q6UY11 383 aa7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 CERS5Q8N5B7 392 aa7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 METTL22Q9BUU2 404 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 R3HDMLQ9H3Y0 253 aa7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 EXOC6BQ9Y2D4 811 aa7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 FAM89AQ96GI7 184 aa7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.36□□□□□ -1.23
TOPBP1-201ENST00000260810 EZH2Q15910 746 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-201ENST00000260810 GIGYF2Q6Y7W6 1299 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-201ENST00000260810 TTC14Q96N46 770 aa7.35□□□□□ -1.23
TOPBP1-201ENST00000260810 SLC24A1O60721 1099 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms