RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.61■■■□□ 2.01
PREB-201ENST00000260643 KRT32Q14532 448 aa27.6■■■□□ 2.01
PREB-201ENST00000260643 PGBD1Q96JS3 809 aa27.6■■■□□ 2.01
PREB-201ENST00000260643 FEZ1Q99689 392 aa27.6■■■□□ 2.01
PREB-201ENST00000260643 CWF19L2Q2TBE0 894 aaKnown RBP27.6■■■□□ 2.01
PREB-201ENST00000260643 FSD1Q9BTV5 496 aa27.6■■■□□ 2.01
PREB-201ENST00000260643 TRIM5Q9C035 493 aa27.6■■■□□ 2.01
PREB-201ENST00000260643 TFIP11Q9UBB9 837 aaKnown RBP27.6■■■□□ 2.01
PREB-201ENST00000260643 PHRF1Q9P1Y6 1649 aaKnown RBP27.6■■■□□ 2.01
PREB-201ENST00000260643 ZNF165P49910 485 aa27.59■■■□□ 2.01
PREB-201ENST00000260643 RESTQ13127 1097 aa27.59■■■□□ 2.01
PREB-201ENST00000260643 PAXBP1Q9Y5B6 917 aa27.59■■■□□ 2.01
PREB-201ENST00000260643 NR1I2O75469 434 aa27.59■■■□□ 2.01
PREB-201ENST00000260643 PROSER3Q2NL68 480 aa27.59■■■□□ 2.01
PREB-201ENST00000260643 PLEKHO1Q53GL0 409 aaPredicted RBP27.59■■■□□ 2.01
PREB-201ENST00000260643 GTF3C6Q969F1 213 aa27.59■■■□□ 2.01
PREB-201ENST00000260643 CCDC8Q9H0W5 538 aaPredicted RBP27.59■■■□□ 2.01
PREB-201ENST00000260643 TAF6LQ9Y6J9 622 aa27.59■■■□□ 2.01
PREB-201ENST00000260643 TAF5LO75529 589 aa27.58■■■□□ 2.01
PREB-201ENST00000260643 LRMPQ12912 555 aa27.58■■■□□ 2.01
PREB-201ENST00000260643 AMOTQ4VCS5 1084 aa27.58■■■□□ 2.01
PREB-201ENST00000260643 ZNF530Q6P9A1 599 aaPredicted RBP27.58■■■□□ 2.01
PREB-201ENST00000260643 SARM1Q6SZW1 724 aa27.58■■■□□ 2.01
PREB-201ENST00000260643 BICC1Q9H694 974 aaKnown RBP27.58■■■□□ 2.01
PREB-201ENST00000260643 RNMTO43148 476 aaKnown RBP27.58■■■□□ 2
PREB-201ENST00000260643 NCBP1Q09161 790 aaKnown RBP27.58■■■□□ 2
PREB-201ENST00000260643 ZSCAN16Q9H4T2 348 aaPredicted RBP27.58■■■□□ 2
PREB-201ENST00000260643 TLR7Q9NYK1 1049 aaKnown RBP27.58■■■□□ 2
PREB-201ENST00000260643 NRBP1Q9UHY1 535 aa27.58■■■□□ 2
PREB-201ENST00000260643 DRC7Q8IY82 874 aa27.57■■■□□ 2
PREB-201ENST00000260643 TCEANC2Q96MN5 208 aa27.57■■■□□ 2
PREB-201ENST00000260643 ZNF589Q86UQ0 364 aaPredicted RBP27.56■■■□□ 2
PREB-201ENST00000260643 BOLA2Q9H3K6 86 aa27.56■■■□□ 2
PREB-201ENST00000260643 RFX7Q2KHR2 1363 aa27.56■■■□□ 2
PREB-201ENST00000260643 MPRIPQ6WCQ1 1025 aa27.55■■■□□ 2
PREB-201ENST00000260643 BICD2Q8TD16 824 aa27.55■■■□□ 2
PREB-201ENST00000260643 CLIP2Q9UDT6 1046 aa27.55■■■□□ 2
PREB-201ENST00000260643 CFAP45Q9UL16 551 aa27.55■■■□□ 2
PREB-201ENST00000260643 DDX58O95786 925 aaKnown RBP27.54■■■□□ 2
PREB-201ENST00000260643 TNNT1P13805 278 aa27.54■■■□□ 2
PREB-201ENST00000260643 DNAJC25Q9H1X3 360 aa27.54■■■□□ 2
PREB-201ENST00000260643 LMTK3Q96Q04 1460 aa27.54■■■□□ 2
PREB-201ENST00000260643 NEMFO60524 1076 aa27.53■■■□□ 2
PREB-201ENST00000260643 KIF20AO95235 890 aa27.53■■■□□ 2
PREB-201ENST00000260643 IQCB1Q15051 598 aa27.53■■■□□ 2
PREB-201ENST00000260643 CACTINQ8WUQ7 758 aaKnown RBP27.53■■■□□ 2
PREB-201ENST00000260643 MRFAP1L1Q96HT8 127 aa27.53■■■□□ 2
PREB-201ENST00000260643 C16orf45Q96MC5 204 aaPredicted RBP27.53■■■□□ 2
PREB-201ENST00000260643 CTAGE5O15320 804 aa27.52■■■□□ 2
PREB-201ENST00000260643 BRF1Q92994 677 aa27.52■■■□□ 2
PREB-201ENST00000260643 DDX21Q9NR30 783 aaKnown RBP eCLIP27.52■■■□□ 2
PREB-201ENST00000260643 U2AF2P26368 475 aaKnown RBP eCLIP27.52■■■□□ 22e-6■■■■□ 21.8
PREB-201ENST00000260643 RBM6P78332 1123 aaKnown RBP27.52■■■□□ 2
PREB-201ENST00000260643 NEK1Q96PY6 1258 aa27.52■■■□□ 2
PREB-201ENST00000260643 JAK2O60674 1132 aa27.51■■□□□ 1.99
PREB-201ENST00000260643 STK3Q13188 491 aa27.51■■□□□ 1.99
PREB-201ENST00000260643 SMARCC2Q8TAQ2 1214 aa27.51■■□□□ 1.99
PREB-201ENST00000260643 OGFRQ9NZT2 677 aa27.51■■□□□ 1.99
PREB-201ENST00000260643 ATP5JP18859 108 aa27.5■■□□□ 1.99
PREB-201ENST00000260643 CCDC144BQ3MJ40 725 aa27.5■■□□□ 1.99
PREB-201ENST00000260643 CCDC144CPQ8IYA2 1237 aa27.5■■□□□ 1.99
PREB-201ENST00000260643 KCNH5Q8NCM2 988 aa27.5■■□□□ 1.99
PREB-201ENST00000260643 PXDNQ92626 1479 aa27.5■■□□□ 1.99
PREB-201ENST00000260643 LLPHQ9BRT6 129 aaKnown RBP27.5■■□□□ 1.99
PREB-201ENST00000260643 KCNA6P17658 529 aa27.5■■□□□ 1.99
PREB-201ENST00000260643 PHF8Q9UPP1 1060 aa27.5■■□□□ 1.99
PREB-201ENST00000260643 COL15A1P39059 1388 aa27.49■■□□□ 1.99
PREB-201ENST00000260643 U3KPZ7 1027 aaPredicted RBP27.49■■□□□ 1.99
PREB-201ENST00000260643 IGKV5-2P06315 115 aa27.49■■□□□ 1.99
PREB-201ENST00000260643 ADD1P35611 737 aaKnown RBP27.49■■□□□ 1.99
PREB-201ENST00000260643 C1orf141Q5JVX7 400 aa27.49■■□□□ 1.99
PREB-201ENST00000260643 RCOR1Q9UKL0 485 aa27.49■■□□□ 1.99
PREB-201ENST00000260643 SPDYE4A6NLX3 237 aa27.48■■□□□ 1.99
PREB-201ENST00000260643 PDIA6Q15084 440 aa27.48■■□□□ 1.99
PREB-201ENST00000260643 NAA16Q6N069 864 aaPredicted RBP27.48■■□□□ 1.99
PREB-201ENST00000260643 LRRC8AQ8IWT6 810 aa27.48■■□□□ 1.99
PREB-201ENST00000260643 CCDC112Q8NEF3 446 aa27.48■■□□□ 1.99
PREB-201ENST00000260643 CGNQ9P2M7 1197 aaKnown RBP27.48■■□□□ 1.99
PREB-201ENST00000260643 CTNNA3Q9UI47 895 aa27.48■■□□□ 1.99
PREB-201ENST00000260643 ZHX1Q9UKY1 873 aaPredicted RBP27.48■■□□□ 1.99
PREB-201ENST00000260643 SIPA1L3O60292 1781 aaPredicted RBP27.48■■□□□ 1.99
PREB-201ENST00000260643 ATL3Q6DD88 541 aa27.47■■□□□ 1.99
PREB-201ENST00000260643 THEMISQ8N1K5 641 aaPredicted RBP27.47■■□□□ 1.99
PREB-201ENST00000260643 RGPD2P0DJD1 1756 aa27.47■■□□□ 1.99
PREB-201ENST00000260643 ADAMTS7Q9UKP4 1686 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 H3BQV1 296 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 STX1AQ16623 288 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 TPD52L1Q16890 204 aaPredicted RBP27.46■■□□□ 1.99
PREB-201ENST00000260643 IFFO2Q5TF58 517 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 Q6ZUG5 572 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 C14orf37Q86TY3 774 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 COPRSQ9NQ92 184 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 KCND1Q9NSA2 647 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 PRAMEF22A3QJZ6 481 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 GOLGA6L19H0YKK7 550 aa27.46■■□□□ 1.99
PREB-201ENST00000260643 CEBPAP49715 358 aaPredicted RBP27.46■■□□□ 1.99
PREB-201ENST00000260643 SIL1Q9H173 461 aa27.45■■□□□ 1.99
PREB-201ENST00000260643 PFKFB2O60825 505 aa27.45■■□□□ 1.98
PREB-201ENST00000260643 LRRC59Q96AG4 307 aaKnown RBP27.45■■□□□ 1.98
PREB-201ENST00000260643 CEP135Q66GS9 1140 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms