RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 YY1P25490 414 aa21.17■□□□□ 0.98
SDCBP-201ENST00000260130 GRAPQ13588 217 aa21.17■□□□□ 0.98
SDCBP-201ENST00000260130 CCDC152Q4G0S7 254 aa21.17■□□□□ 0.98
SDCBP-201ENST00000260130 GRAPLQ8TC17 118 aaPredicted RBP21.17■□□□□ 0.98
SDCBP-201ENST00000260130 PPEF1O14829 653 aaPredicted RBP21.17■□□□□ 0.98
SDCBP-201ENST00000260130 CCDC93Q567U6 631 aa21.17■□□□□ 0.98
SDCBP-201ENST00000260130 ERICH6BQ5W0A0 696 aa21.17■□□□□ 0.98
SDCBP-201ENST00000260130 PLA2G12BQ9BX93 195 aa21.17■□□□□ 0.98
SDCBP-201ENST00000260130 LAMB2P55268 1798 aa21.16■□□□□ 0.98
SDCBP-201ENST00000260130 CTSWP56202 376 aa21.16■□□□□ 0.98
SDCBP-201ENST00000260130 OLFM4Q6UX06 510 aa21.16■□□□□ 0.98
SDCBP-201ENST00000260130 FRAT1Q92837 279 aaPredicted RBP21.16■□□□□ 0.98
SDCBP-201ENST00000260130 NFKBIEO00221 500 aa21.16■□□□□ 0.98
SDCBP-201ENST00000260130 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
SDCBP-201ENST00000260130 TTLL11Q8NHH1 800 aa21.16■□□□□ 0.98
SDCBP-201ENST00000260130 RASSF7Q02833 373 aa21.15■□□□□ 0.98
SDCBP-201ENST00000260130 CCDC85AQ96PX6 553 aaPredicted RBP21.15■□□□□ 0.98
SDCBP-201ENST00000260130 CCT4P50991 539 aaKnown RBP21.14■□□□□ 0.98
SDCBP-201ENST00000260130 RTKN2Q8IZC4 609 aa21.14■□□□□ 0.98
SDCBP-201ENST00000260130 CELF1Q92879 486 aaKnown RBP21.14■□□□□ 0.98
SDCBP-201ENST00000260130 ATP6V0A2Q9Y487 856 aa21.14■□□□□ 0.98
SDCBP-201ENST00000260130 RBM19Q9Y4C8 960 aaKnown RBP21.14■□□□□ 0.98
SDCBP-201ENST00000260130 CACNA1SQ13698 1873 aa21.14■□□□□ 0.97
SDCBP-201ENST00000260130 TMX4Q9H1E5 349 aaPredicted RBP21.14■□□□□ 0.97
SDCBP-201ENST00000260130 SEC31BQ9NQW1 1179 aa21.14■□□□□ 0.97
SDCBP-201ENST00000260130 ATF7IPQ6VMQ6 1270 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 TAOK3Q9H2K8 898 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 CHD4Q14839 1912 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 NBPF7P0C2Y1 421 aaPredicted RBP21.13■□□□□ 0.97
SDCBP-201ENST00000260130 GRIPAP1Q4V328 841 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 TMC4Q7Z404 712 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 SP8Q8IXZ3 490 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 UTYO14607 1347 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 LTBP3Q9NS15 1303 aa21.13■□□□□ 0.97
SDCBP-201ENST00000260130 CSF1RP07333 972 aa21.12■□□□□ 0.97
SDCBP-201ENST00000260130 TRIM27P14373 513 aa21.12■□□□□ 0.97
SDCBP-201ENST00000260130 RPS8P62241 208 aaKnown RBP21.12■□□□□ 0.97
SDCBP-201ENST00000260130 C9orf131Q5VYM1 1079 aa21.12■□□□□ 0.97
SDCBP-201ENST00000260130 LMNB1P20700 586 aa21.12■□□□□ 0.97
SDCBP-201ENST00000260130 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
SDCBP-201ENST00000260130 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
SDCBP-201ENST00000260130 GREM2Q9H772 168 aa21.12■□□□□ 0.97
SDCBP-201ENST00000260130 FOXO4P98177 505 aa21.11■□□□□ 0.97
SDCBP-201ENST00000260130 SLC51AQ86UW1 340 aa21.11■□□□□ 0.97
SDCBP-201ENST00000260130 PRELPP51888 382 aa21.1■□□□□ 0.97
SDCBP-201ENST00000260130 FKBP4Q02790 459 aaKnown RBP eCLIP21.1■□□□□ 0.97
SDCBP-201ENST00000260130 RNF181Q9P0P0 153 aa21.1■□□□□ 0.97
SDCBP-201ENST00000260130 RTL9Q8NET4 1388 aa21.1■□□□□ 0.97
SDCBP-201ENST00000260130 EPHA10Q5JZY3 1008 aa21.09■□□□□ 0.97
SDCBP-201ENST00000260130 INTS3Q68E01 1043 aaKnown RBP21.09■□□□□ 0.97
SDCBP-201ENST00000260130 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
SDCBP-201ENST00000260130 SNED1Q8TER0 1413 aa21.09■□□□□ 0.97
SDCBP-201ENST00000260130 CLUAP1Q96AJ1 413 aa21.09■□□□□ 0.97
SDCBP-201ENST00000260130 SUCLG2Q96I99 432 aa21.09■□□□□ 0.97
SDCBP-201ENST00000260130 PSMD1Q99460 953 aa21.09■□□□□ 0.97
SDCBP-201ENST00000260130 TNNQ9UQP3 1299 aa21.09■□□□□ 0.97
SDCBP-201ENST00000260130 FER1L6Q2WGJ9 1857 aa21.08■□□□□ 0.97
SDCBP-201ENST00000260130 ANKRD18AQ8IVF6 992 aa21.08■□□□□ 0.97
SDCBP-201ENST00000260130 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.97
SDCBP-201ENST00000260130 FAM161AQ3B820 660 aa21.07■□□□□ 0.96
SDCBP-201ENST00000260130 LMBR1LQ6UX01 489 aa21.07■□□□□ 0.96
SDCBP-201ENST00000260130 KAZALD1Q96I82 304 aa21.07■□□□□ 0.96
SDCBP-201ENST00000260130 ITGA6P23229 1130 aa21.07■□□□□ 0.96
SDCBP-201ENST00000260130 MPNDQ8N594 471 aa21.07■□□□□ 0.96
SDCBP-201ENST00000260130 TAF1P21675 1872 aa21.07■□□□□ 0.96
SDCBP-201ENST00000260130 CHMP3Q9Y3E7 222 aa21.06■□□□□ 0.96
SDCBP-201ENST00000260130 COL4A1P02462 1669 aa21.06■□□□□ 0.96
SDCBP-201ENST00000260130 DPP8Q6V1X1 898 aaPredicted RBP21.06■□□□□ 0.96
SDCBP-201ENST00000260130 ZNF277Q9NRM2 450 aaPredicted RBP21.06■□□□□ 0.96
SDCBP-201ENST00000260130 ANKRD18BA2A2Z9 1011 aa21.04■□□□□ 0.96
SDCBP-201ENST00000260130 IFIT5Q13325 482 aaKnown RBP21.04■□□□□ 0.96
SDCBP-201ENST00000260130 MYH3P11055 1940 aa21.04■□□□□ 0.96
SDCBP-201ENST00000260130 IGHMBP2P38935 993 aaKnown RBP21.04■□□□□ 0.96
SDCBP-201ENST00000260130 BICC1Q9H694 974 aaKnown RBP21.04■□□□□ 0.96
SDCBP-201ENST00000260130 BSDC1Q9NW68 430 aaPredicted RBP21.04■□□□□ 0.96
SDCBP-201ENST00000260130 NSFL1CQ9UNZ2 370 aaKnown RBP21.04■□□□□ 0.96
SDCBP-201ENST00000260130 UBTFL1P0CB47 393 aaPredicted RBP21.03■□□□□ 0.96
SDCBP-201ENST00000260130 IARSP41252 1262 aaKnown RBP21.03■□□□□ 0.96
SDCBP-201ENST00000260130 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
SDCBP-201ENST00000260130 DZIP1LQ8IYY4 767 aaKnown RBP21.03■□□□□ 0.96
SDCBP-201ENST00000260130 SUPT20HQ8NEM7 779 aa21.03■□□□□ 0.96
SDCBP-201ENST00000260130 RTFDC1Q9BY42 306 aaPredicted RBP21.03■□□□□ 0.96
SDCBP-201ENST00000260130 SBF1O95248 1867 aa21.03■□□□□ 0.96
SDCBP-201ENST00000260130 CCDC57Q2TAC2 916 aa21.03■□□□□ 0.96
SDCBP-201ENST00000260130 RABL6Q3YEC7 729 aaPredicted RBP21.03■□□□□ 0.96
SDCBP-201ENST00000260130 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
SDCBP-201ENST00000260130 ZNF784Q8NCA9 323 aaPredicted RBP21.02■□□□□ 0.96
SDCBP-201ENST00000260130 MEIS3Q99687 375 aa21.02■□□□□ 0.96
SDCBP-201ENST00000260130 HDAC5Q9UQL6 1122 aa21.02■□□□□ 0.96
SDCBP-201ENST00000260130 ZC3H4Q9UPT8 1303 aaKnown RBP21.02■□□□□ 0.96
SDCBP-201ENST00000260130 GPSM2P81274 684 aa21.02■□□□□ 0.95
SDCBP-201ENST00000260130 MPHOSPH8Q99549 860 aa21.02■□□□□ 0.95
SDCBP-201ENST00000260130 PPP4R2Q9NY27 417 aa21.02■□□□□ 0.95
SDCBP-201ENST00000260130 ANKRD44Q8N8A2 993 aa21.01■□□□□ 0.95
SDCBP-201ENST00000260130 VPS33BQ9H267 617 aa21.01■□□□□ 0.95
SDCBP-201ENST00000260130 GNAI3P08754 354 aa21■□□□□ 0.95
SDCBP-201ENST00000260130 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
SDCBP-201ENST00000260130 PODXL2Q9NZ53 605 aa21■□□□□ 0.95
SDCBP-201ENST00000260130 ANKIB1Q9P2G1 1089 aa21■□□□□ 0.95
SDCBP-201ENST00000260130 MINPP1Q9UNW1 487 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms