RNA–Protein interactions for RNA: ENST00000259038.6

MRPL47-201, Transcript of mitochondrial ribosomal protein L47, humanhuman

TSL 1 (best) BASIC

Gene MRPL47, Length 1,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47-201ENST00000259038 SCNN1DP51172 638 aa11.05□□□□□ -0.64
MRPL47-201ENST00000259038 PSME1Q06323 249 aa11.05□□□□□ -0.64
MRPL47-201ENST00000259038 PPARGC1BQ86YN6 1023 aaKnown RBP11.05□□□□□ -0.64
MRPL47-201ENST00000259038 VWA5B2Q8N398 1253 aa11.05□□□□□ -0.64
MRPL47-201ENST00000259038 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
MRPL47-201ENST00000259038 ANKRD50Q9ULJ7 1429 aa11.05□□□□□ -0.64
MRPL47-201ENST00000259038 NRXN3Q9Y4C0 1643 aa11.05□□□□□ -0.64
MRPL47-201ENST00000259038 PIK3R4Q99570 1358 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
MRPL47-201ENST00000259038 UNC13BO14795 1591 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 MST1RQ04912 1400 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 CDC14CA4D256 554 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 SMTNP53814 917 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 TRIM22Q8IYM9 498 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
MRPL47-201ENST00000259038 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
MRPL47-201ENST00000259038 TRPM2O94759 1503 aa11.04□□□□□ -0.64
MRPL47-201ENST00000259038 A0A1B0GTH6 734 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 F11P03951 625 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 USP17L2Q6R6M4 530 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 RIPOR1Q6ZS17 1223 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 USP17L1Q7RTZ2 530 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 UCN2Q96RP3 112 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 GAS2L1Q99501 681 aaPredicted RBP11.03□□□□□ -0.64
MRPL47-201ENST00000259038 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
MRPL47-201ENST00000259038 RBM6P78332 1123 aaKnown RBP11.02□□□□□ -0.65
MRPL47-201ENST00000259038 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
MRPL47-201ENST00000259038 RBM19Q9Y4C8 960 aaKnown RBP11.02□□□□□ -0.65
MRPL47-201ENST00000259038 DCCP43146 1447 aa11.01□□□□□ -0.65
MRPL47-201ENST00000259038 NIFKQ9BYG3 293 aaKnown RBP11.01□□□□□ -0.65
MRPL47-201ENST00000259038 STK17AQ9UEE5 414 aa11.01□□□□□ -0.65
MRPL47-201ENST00000259038 NALCNQ8IZF0 1738 aa11.01□□□□□ -0.65
MRPL47-201ENST00000259038 A6NJY4 79 aa11□□□□□ -0.65
MRPL47-201ENST00000259038 TMEM229AB2RXF0 380 aa11□□□□□ -0.65
MRPL47-201ENST00000259038 CDK2AP1O14519 115 aa11□□□□□ -0.65
MRPL47-201ENST00000259038 FAM50AQ14320 339 aaKnown RBP11□□□□□ -0.65
MRPL47-201ENST00000259038 LARGE2Q8N3Y3 721 aa11□□□□□ -0.65
MRPL47-201ENST00000259038 LRRC59Q96AG4 307 aaKnown RBP11□□□□□ -0.65
MRPL47-201ENST00000259038 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
MRPL47-201ENST00000259038 MKRN1Q9UHC7 482 aaKnown RBP11□□□□□ -0.65
MRPL47-201ENST00000259038 GTF3C3Q9Y5Q9 886 aa11□□□□□ -0.65
MRPL47-201ENST00000259038 METP08581 1390 aa11□□□□□ -0.65
MRPL47-201ENST00000259038 PALM3A6NDB9 673 aaPredicted RBP10.99□□□□□ -0.65
MRPL47-201ENST00000259038 ADAMTS2O95450 1211 aa10.99□□□□□ -0.65
MRPL47-201ENST00000259038 LBRQ14739 615 aaKnown RBP10.99□□□□□ -0.65
MRPL47-201ENST00000259038 MTFR1Q15390 333 aa10.99□□□□□ -0.65
MRPL47-201ENST00000259038 C4orf17Q53FE4 359 aa10.99□□□□□ -0.65
MRPL47-201ENST00000259038 ZSCAN1Q8NBB4 408 aa10.99□□□□□ -0.65
MRPL47-201ENST00000259038 DNAAF2Q9NVR5 837 aaKnown RBP10.99□□□□□ -0.65
MRPL47-201ENST00000259038 SERTAD1Q9UHV2 236 aa10.99□□□□□ -0.65
MRPL47-201ENST00000259038 SETBP1Q9Y6X0 1596 aa10.99□□□□□ -0.65
MRPL47-201ENST00000259038 IQGAP3Q86VI3 1631 aa10.98□□□□□ -0.65
MRPL47-201ENST00000259038 CSB-PGBD3P0DP91 1061 aa10.98□□□□□ -0.65
MRPL47-201ENST00000259038 PGBD3Q8N328 593 aa10.98□□□□□ -0.65
MRPL47-201ENST00000259038 GPR161Q8N6U8 529 aaKnown RBP10.98□□□□□ -0.65
MRPL47-201ENST00000259038 C1orf216Q8TAB5 229 aa10.98□□□□□ -0.65
MRPL47-201ENST00000259038 TRERF1Q96PN7 1200 aa10.98□□□□□ -0.65
MRPL47-201ENST00000259038 COL25A1Q9BXS0 654 aaPredicted RBP10.98□□□□□ -0.65
MRPL47-201ENST00000259038 PPP1R12CQ9BZL4 782 aa10.98□□□□□ -0.65
MRPL47-201ENST00000259038 SRCAPQ6ZRS2 3230 aa10.98□□□□□ -0.65
MRPL47-201ENST00000259038 STAU1O95793 577 aaKnown RBP10.97□□□□□ -0.65
MRPL47-201ENST00000259038 PHKA2P46019 1235 aa10.97□□□□□ -0.65
MRPL47-201ENST00000259038 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
MRPL47-201ENST00000259038 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.65
MRPL47-201ENST00000259038 CCDC102BQ68D86 513 aa10.96□□□□□ -0.65
MRPL47-201ENST00000259038 ZNF837Q96EG3 531 aaPredicted RBP10.96□□□□□ -0.65
MRPL47-201ENST00000259038 ZMYND15Q9H091 742 aa10.96□□□□□ -0.65
MRPL47-201ENST00000259038 NUCKS1Q9H1E3 243 aaKnown RBP10.96□□□□□ -0.65
MRPL47-201ENST00000259038 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
MRPL47-201ENST00000259038 LAMC1P11047 1609 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 C1orf167Q5SNV9 1468 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 M0R2N6 131 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 DBN1Q16643 649 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 OGFOD1Q8N543 542 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 CNTNAP3BQ96NU0 1288 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 ORAI2Q96SN7 254 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 CNTNAP3Q9BZ76 1288 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 ZNF358Q9NW07 568 aa10.95□□□□□ -0.66
MRPL47-201ENST00000259038 CUEDC1Q9NWM3 386 aaPredicted RBP10.95□□□□□ -0.66
MRPL47-201ENST00000259038 ATAD2Q6PL18 1390 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 MSX1P28360 303 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 NBPF1Q3BBV0 1214 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 EFHC2Q5JST6 749 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 LARP1Q6PKG0 1096 aaKnown RBP10.94□□□□□ -0.66
MRPL47-201ENST00000259038 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
MRPL47-201ENST00000259038 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 USP21Q9UK80 565 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 PHF24Q9UPV7 400 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
MRPL47-201ENST00000259038 NUP155O75694 1391 aa10.93□□□□□ -0.66
MRPL47-201ENST00000259038 ZBTB7BO15156 539 aaPredicted RBP10.93□□□□□ -0.66
MRPL47-201ENST00000259038 SIX5Q8N196 739 aa10.93□□□□□ -0.66
MRPL47-201ENST00000259038 ATRNO75882 1429 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms