RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ADCY2Q08462 1091 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 SNW1Q13573 536 aaKnown RBP7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 CCDC96Q2M329 555 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 ATL2Q8NHH9 583 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 FBF1Q8TES7 1133 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 TCP11Q8WWU5 503 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 TEKT1Q969V4 418 aa7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 TTC12Q9H892 705 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-201ENST00000257290 EIF3CLB5ME19 914 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 CUL3Q13618 768 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 SREK1Q8WXA9 508 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 CCDC47Q96A33 483 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 EIF3CQ99613 913 aaKnown RBP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 ZNF189O75820 626 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 IKQ13123 557 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 EPSTI1Q96J88 318 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 SPECC1LQ69YQ0 1117 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 EXOC4Q96A65 974 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 BATF3Q9NR55 127 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 RTEL1-TNFRSF6BF6WH68 1400 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 E2F6O75461 281 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 SSBP05455 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 MUM1L1Q5H9M0 696 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 CFAP70Q5T0N1 1121 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 IQCEQ6IPM2 695 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 BAG1Q99933 345 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 CAVIN2O95810 425 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 BICD2Q8TD16 824 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 MORC4Q8TE76 937 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 AFAP1L1Q8TED9 768 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 BHMTQ93088 406 aa7.72□□□□□ -1.17
PDGFRA-201ENST00000257290 ATP8B1O43520 1251 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 RPAP2Q8IXW5 612 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 ARIH1Q9Y4X5 557 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 ADGRL2O95490 1459 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 VPS37CA5D8V6 355 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 MARCH6O60337 910 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 CYP2C19P33261 490 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 TUBB4BP68371 445 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 IFFO1Q0D2I5 559 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 HDXQ7Z353 690 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 KIAA0825Q8IV33 1275 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 GBP5Q96PP8 586 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 FAM114A2Q9NRY5 505 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 DAAM1Q9Y4D1 1078 aa7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 MORC2Q9Y6X9 1032 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-201ENST00000257290 TXLNAP40222 546 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 SEPT10Q9P0V9 454 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 PNMA2Q9UL42 364 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 CTDP1Q9Y5B0 961 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 SCP2P22307 547 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 IMMTQ16891 758 aaKnown RBP7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 CAPRIN2Q6IMN6 1127 aaKnown RBP7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 IRF6O14896 467 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 ODF2Q5BJF6 829 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 KDM5BQ9UGL1 1544 aa7.71□□□□□ -1.18
PDGFRA-201ENST00000257290 TUBBP07437 444 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 PHLDB2Q86SQ0 1253 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ZNF692Q9BU19 519 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ABCF2Q9UG63 623 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 SPECC1L-ADORA2AF8WAN1 911 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 EPB41L2O43491 1005 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 RBM5P52756 815 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 GMNNO75496 209 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 GYS2P54840 703 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 INAQ16352 499 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ABCA8O94911 1581 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 CETN3O15182 167 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 TBCAO75347 108 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 NMIQ13287 307 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ELF2Q15723 593 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 GRAMD4Q6IC98 578 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ABTB1Q969K4 478 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 LARP6Q9BRS8 491 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 YIPF3Q9GZM5 350 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 SPINK5Q9NQ38 1064 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 HELLSQ9NRZ9 838 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 UHRF1BP1LA0JNW5 1464 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 CCDC160A6NGH7 325 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 AMPHP49418 695 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 DIXDC1Q155Q3 683 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 JAKMIP2Q96AA8 810 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ZNF396Q96N95 335 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 NAP1L4Q99733 375 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 TUBA8Q9NY65 449 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 TMOD4Q9NZQ9 345 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 RABGAP1Q9Y3P9 1069 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 ABCC10Q5T3U5 1492 aa7.7□□□□□ -1.18
PDGFRA-201ENST00000257290 SRGAP3O43295 1099 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 C6orf203Q9P0P8 240 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 A0A0G2JS52 829 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 KLHL33A6NCF5 533 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 TRIM66O15016 1216 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 YY1P25490 414 aa7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 LACTBP83111 547 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-201ENST00000257290 NANOGNBQ7Z5D8 188 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms