RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 SSH1Q8WYL5 1049 aa31.94■■■□□ 2.7
LSM7-201ENST00000252622 PSMD1Q99460 953 aa31.94■■■□□ 2.7
LSM7-201ENST00000252622 CCDC88AQ3V6T2 1871 aa31.94■■■□□ 2.7
LSM7-201ENST00000252622 DICER1Q9UPY3 1922 aaKnown RBP31.93■■■□□ 2.7
LSM7-201ENST00000252622 JARID2Q92833 1246 aaPredicted RBP31.93■■■□□ 2.7
LSM7-201ENST00000252622 H7C1W4 665 aa31.92■■■□□ 2.7
LSM7-201ENST00000252622 BEND3Q5T5X7 828 aa31.92■■■□□ 2.7
LSM7-201ENST00000252622 TMC4Q7Z404 712 aa31.92■■■□□ 2.7
LSM7-201ENST00000252622 TMX4Q9H1E5 349 aaPredicted RBP31.92■■■□□ 2.7
LSM7-201ENST00000252622 CCDC152Q4G0S7 254 aa31.9■■■□□ 2.7
LSM7-201ENST00000252622 SP8Q8IXZ3 490 aa31.9■■■□□ 2.7
LSM7-201ENST00000252622 PTPRCP08575 1304 aa31.9■■■□□ 2.7
LSM7-201ENST00000252622 UBE3BQ7Z3V4 1068 aa31.89■■■□□ 2.7
LSM7-201ENST00000252622 SLC51AQ86UW1 340 aa31.89■■■□□ 2.7
LSM7-201ENST00000252622 CELF1Q92879 486 aaKnown RBP31.88■■■□□ 2.69
LSM7-201ENST00000252622 ZNF277Q9NRM2 450 aaPredicted RBP31.88■■■□□ 2.69
LSM7-201ENST00000252622 KDM2BQ8NHM5 1336 aa31.88■■■□□ 2.69
LSM7-201ENST00000252622 LRRC37AA6NMS7 1700 aa31.88■■■□□ 2.69
LSM7-201ENST00000252622 CASP7P55210 303 aa31.87■■■□□ 2.69
LSM7-201ENST00000252622 CTSWP56202 376 aa31.87■■■□□ 2.69
LSM7-201ENST00000252622 TAF1P21675 1872 aa31.86■■■□□ 2.69
LSM7-201ENST00000252622 IARSP41252 1262 aaKnown RBP31.86■■■□□ 2.69
LSM7-201ENST00000252622 PLA2G12BQ9BX93 195 aa31.86■■■□□ 2.69
LSM7-201ENST00000252622 BCL2L13Q9BXK5 485 aa31.86■■■□□ 2.69
LSM7-201ENST00000252622 SMC4Q9NTJ3 1288 aa31.86■■■□□ 2.69
LSM7-201ENST00000252622 ALDH1L1O75891 902 aa31.85■■■□□ 2.69
LSM7-201ENST00000252622 COL4A1P02462 1669 aa31.85■■■□□ 2.69
LSM7-201ENST00000252622 ZBED9Q6R2W3 1325 aa31.84■■■□□ 2.69
LSM7-201ENST00000252622 GLTPD2A6NH11 291 aa31.84■■■□□ 2.69
LSM7-201ENST00000252622 RTL9Q8NET4 1388 aa31.83■■■□□ 2.69
LSM7-201ENST00000252622 MYH3P11055 1940 aa31.83■■■□□ 2.69
LSM7-201ENST00000252622 RPS8P62241 208 aaKnown RBP31.83■■■□□ 2.69
LSM7-201ENST00000252622 SLC4A10Q6U841 1118 aa31.83■■■□□ 2.69
LSM7-201ENST00000252622 TTLL11Q8NHH1 800 aa31.83■■■□□ 2.69
LSM7-201ENST00000252622 SEC31BQ9NQW1 1179 aa31.83■■■□□ 2.69
LSM7-201ENST00000252622 RTFDC1Q9BY42 306 aaPredicted RBP31.82■■■□□ 2.68
LSM7-201ENST00000252622 SRCIN1Q9C0H9 1055 aa31.82■■■□□ 2.68
LSM7-201ENST00000252622 BRPF1P55201 1214 aaPredicted RBP31.81■■■□□ 2.68
LSM7-201ENST00000252622 DPP8Q6V1X1 898 aaPredicted RBP31.81■■■□□ 2.68
LSM7-201ENST00000252622 MPNDQ8N594 471 aa31.81■■■□□ 2.68
LSM7-201ENST00000252622 KIF3CO14782 793 aa31.8■■■□□ 2.68
LSM7-201ENST00000252622 SUPT20HQ8NEM7 779 aa31.8■■■□□ 2.68
LSM7-201ENST00000252622 CCDC85AQ96PX6 553 aaPredicted RBP31.8■■■□□ 2.68
LSM7-201ENST00000252622 VPS33BQ9H267 617 aa31.8■■■□□ 2.68
LSM7-201ENST00000252622 NMRK2Q9NPI5 230 aa31.8■■■□□ 2.68
LSM7-201ENST00000252622 GRM8O00222 908 aa31.79■■■□□ 2.68
LSM7-201ENST00000252622 DPY19L2Q6NUT2 758 aa31.79■■■□□ 2.68
LSM7-201ENST00000252622 RARSP54136 660 aaKnown RBP31.78■■■□□ 2.68
LSM7-201ENST00000252622 DUOX1Q9NRD9 1551 aa31.77■■■□□ 2.68
LSM7-201ENST00000252622 CDC5LQ99459 802 aaKnown RBP31.77■■■□□ 2.68
LSM7-201ENST00000252622 GREM2Q9H772 168 aa31.77■■■□□ 2.68
LSM7-201ENST00000252622 COL4A5P29400 1685 aa31.76■■■□□ 2.68
LSM7-201ENST00000252622 ANKRD18AQ8IVF6 992 aa31.76■■■□□ 2.67
LSM7-201ENST00000252622 JDP2Q8WYK2 163 aa31.76■■■□□ 2.67
LSM7-201ENST00000252622 FZD9O00144 591 aa31.75■■■□□ 2.67
LSM7-201ENST00000252622 CSF1RP07333 972 aa31.75■■■□□ 2.67
LSM7-201ENST00000252622 LARGE2Q8N3Y3 721 aa31.75■■■□□ 2.67
LSM7-201ENST00000252622 C9orf78Q9NZ63 289 aaPredicted RBP31.75■■■□□ 2.67
LSM7-201ENST00000252622 LTBP1Q14766 1721 aa31.75■■■□□ 2.67
LSM7-201ENST00000252622 WDR90Q96KV7 1748 aa31.75■■■□□ 2.67
LSM7-201ENST00000252622 PPIP5K2O43314 1243 aa31.74■■■□□ 2.67
LSM7-201ENST00000252622 C1QTNF8P60827 252 aa31.73■■■□□ 2.67
LSM7-201ENST00000252622 KIF16BQ96L93 1317 aa31.73■■■□□ 2.67
LSM7-201ENST00000252622 GPSM2P81274 684 aa31.72■■■□□ 2.67
LSM7-201ENST00000252622 RRAGCQ9HB90 399 aa31.72■■■□□ 2.67
LSM7-201ENST00000252622 NOB1Q9ULX3 412 aaKnown RBP31.72■■■□□ 2.67
LSM7-201ENST00000252622 NSFL1CQ9UNZ2 370 aaKnown RBP31.72■■■□□ 2.67
LSM7-201ENST00000252622 UTYO14607 1347 aa31.72■■■□□ 2.67
LSM7-201ENST00000252622 ZNF541Q9H0D2 1346 aa31.72■■■□□ 2.67
LSM7-201ENST00000252622 FOXO4P98177 505 aa31.71■■■□□ 2.67
LSM7-201ENST00000252622 KIAA2012Q0VF49 1180 aa31.71■■■□□ 2.67
LSM7-201ENST00000252622 AOC3Q16853 763 aa31.71■■■□□ 2.67
LSM7-201ENST00000252622 FAM161AQ3B820 660 aa31.71■■■□□ 2.67
LSM7-201ENST00000252622 API5Q9BZZ5 524 aaKnown RBP31.71■■■□□ 2.67
LSM7-201ENST00000252622 PODXL2Q9NZ53 605 aa31.71■■■□□ 2.67
LSM7-201ENST00000252622 NIM1KQ8IY84 436 aa31.7■■■□□ 2.67
LSM7-201ENST00000252622 DDNO94850 711 aaPredicted RBP31.69■■■□□ 2.66
LSM7-201ENST00000252622 ITGA6P23229 1130 aa31.69■■■□□ 2.66
LSM7-201ENST00000252622 BSDC1Q9NW68 430 aaPredicted RBP31.69■■■□□ 2.66
LSM7-201ENST00000252622 VEGFAP15692 232 aaPredicted RBP31.68■■■□□ 2.66
LSM7-201ENST00000252622 TOMM70O94826 608 aa31.67■■■□□ 2.66
LSM7-201ENST00000252622 NBPF7P0C2Y1 421 aaPredicted RBP31.67■■■□□ 2.66
LSM7-201ENST00000252622 EIF6P56537 245 aaKnown RBP31.67■■■□□ 2.66
LSM7-201ENST00000252622 ARHGAP45Q92619 1136 aa31.67■■■□□ 2.66
LSM7-201ENST00000252622 L3MBTL3Q96JM7 780 aaPredicted RBP31.67■■■□□ 2.66
LSM7-201ENST00000252622 POLLQ9UGP5 575 aa31.67■■■□□ 2.66
LSM7-201ENST00000252622 IGHMBP2P38935 993 aaKnown RBP31.66■■■□□ 2.66
LSM7-201ENST00000252622 EPHA10Q5JZY3 1008 aa31.66■■■□□ 2.66
LSM7-201ENST00000252622 TBC1D16Q8TBP0 767 aa31.66■■■□□ 2.66
LSM7-201ENST00000252622 POTECB2RU33 542 aa31.65■■■□□ 2.66
LSM7-201ENST00000252622 CCT4P50991 539 aaKnown RBP31.65■■■□□ 2.66
LSM7-201ENST00000252622 GPC2Q8N158 579 aa31.65■■■□□ 2.66
LSM7-201ENST00000252622 EYA3Q99504 573 aa31.65■■■□□ 2.66
LSM7-201ENST00000252622 ANKIB1Q9P2G1 1089 aa31.65■■■□□ 2.66
LSM7-201ENST00000252622 XDHP47989 1333 aa31.65■■■□□ 2.66
LSM7-201ENST00000252622 SPEF2Q9C093 1822 aa31.64■■■□□ 2.66
LSM7-201ENST00000252622 ANKRD18BA2A2Z9 1011 aa31.64■■■□□ 2.66
LSM7-201ENST00000252622 C6orf229H3BNL8 230 aa31.64■■■□□ 2.66
LSM7-201ENST00000252622 LMBR1LQ6UX01 489 aa31.64■■■□□ 2.66
LSM7-201ENST00000252622 C16orf71Q8IYS4 520 aaPredicted RBP31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 338.3 ms