RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 H3BQV1 296 aa17.94■□□□□ 0.46
SAFB2-201ENST00000252542 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
SAFB2-201ENST00000252542 SMIM5Q71RC9 77 aa17.94■□□□□ 0.46
SAFB2-201ENST00000252542 ISY1Q9ULR0 285 aaKnown RBP17.94■□□□□ 0.46
SAFB2-201ENST00000252542 RBSNQ9H1K0 784 aa17.93■□□□□ 0.46
SAFB2-201ENST00000252542 NPHP1O15259 732 aa17.93■□□□□ 0.46
SAFB2-201ENST00000252542 ZSCAN30Q86W11 494 aa17.93■□□□□ 0.46
SAFB2-201ENST00000252542 FAM184AQ8NB25 1140 aa17.93■□□□□ 0.46
SAFB2-201ENST00000252542 WDR33Q9C0J8 1336 aaKnown RBP17.93■□□□□ 0.46
SAFB2-201ENST00000252542 ME3Q16798 604 aa17.93■□□□□ 0.46
SAFB2-201ENST00000252542 TTC39AQ5SRH9 613 aa17.93■□□□□ 0.46
SAFB2-201ENST00000252542 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
SAFB2-201ENST00000252542 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
SAFB2-201ENST00000252542 BRF1Q92994 677 aa17.92■□□□□ 0.46
SAFB2-201ENST00000252542 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
SAFB2-201ENST00000252542 SLC27A2O14975 620 aa17.92■□□□□ 0.46
SAFB2-201ENST00000252542 IDH1O75874 414 aaKnown RBP17.91■□□□□ 0.46
SAFB2-201ENST00000252542 ANAPC15P60006 121 aa17.91■□□□□ 0.46
SAFB2-201ENST00000252542 METTL24Q5JXM2 366 aa17.91■□□□□ 0.46
SAFB2-201ENST00000252542 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
SAFB2-201ENST00000252542 PTMSP20962 102 aa17.91■□□□□ 0.46
SAFB2-201ENST00000252542 TTLL5Q6EMB2 1281 aa17.91■□□□□ 0.46
SAFB2-201ENST00000252542 CCDC24Q8N4L8 307 aa17.91■□□□□ 0.46
SAFB2-201ENST00000252542 TPCN1Q9ULQ1 816 aa17.91■□□□□ 0.46
SAFB2-201ENST00000252542 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
SAFB2-201ENST00000252542 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 A0A1B0GUL7 405 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 ADORA1P30542 326 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 DNTTIP2Q5QJE6 756 aaKnown RBP17.9■□□□□ 0.46
SAFB2-201ENST00000252542 LDHAL6AQ6ZMR3 332 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 JAK2O60674 1132 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 TPM2P07951 284 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 GIMAP6Q6P9H5 292 aa17.9■□□□□ 0.46
SAFB2-201ENST00000252542 BCL11BQ9C0K0 894 aaPredicted RBP17.9■□□□□ 0.46
SAFB2-201ENST00000252542 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
SAFB2-201ENST00000252542 GTF2E1P29083 439 aaPredicted RBP17.89■□□□□ 0.45
SAFB2-201ENST00000252542 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
SAFB2-201ENST00000252542 PSMA5P28066 241 aa17.89■□□□□ 0.45
SAFB2-201ENST00000252542 PIGBQ92521 554 aa17.89■□□□□ 0.45
SAFB2-201ENST00000252542 NCOA5Q9HCD5 579 aaKnown RBP17.89■□□□□ 0.45
SAFB2-201ENST00000252542 WDR17Q8IZU2 1322 aa17.89■□□□□ 0.45
SAFB2-201ENST00000252542 EXOC5O00471 708 aa17.88■□□□□ 0.45
SAFB2-201ENST00000252542 IFIT5Q13325 482 aaKnown RBP17.88■□□□□ 0.45
SAFB2-201ENST00000252542 BRD1O95696 1058 aa17.88■□□□□ 0.45
SAFB2-201ENST00000252542 STARD3NLO95772 234 aa17.88■□□□□ 0.45
SAFB2-201ENST00000252542 HLFQ16534 295 aa17.88■□□□□ 0.45
SAFB2-201ENST00000252542 NALCNQ8IZF0 1738 aa17.88■□□□□ 0.45
SAFB2-201ENST00000252542 Q6ZUG5 572 aa17.88■□□□□ 0.45
SAFB2-201ENST00000252542 ZSCAN22P10073 491 aaPredicted RBP17.87■□□□□ 0.45
SAFB2-201ENST00000252542 BICD2Q8TD16 824 aa17.87■□□□□ 0.45
SAFB2-201ENST00000252542 RGPD2P0DJD1 1756 aa17.87■□□□□ 0.45
SAFB2-201ENST00000252542 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
SAFB2-201ENST00000252542 CCDC158Q5M9N0 1113 aa17.87■□□□□ 0.45
SAFB2-201ENST00000252542 CKAP2LQ8IYA6 745 aa17.87■□□□□ 0.45
SAFB2-201ENST00000252542 PAG1Q9NWQ8 432 aa17.87■□□□□ 0.45
SAFB2-201ENST00000252542 HIP1O00291 1037 aa17.87■□□□□ 0.45
SAFB2-201ENST00000252542 CCDC144CPQ8IYA2 1237 aa17.86■□□□□ 0.45
SAFB2-201ENST00000252542 ZNF830Q96NB3 372 aaPredicted RBP17.86■□□□□ 0.45
SAFB2-201ENST00000252542 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
SAFB2-201ENST00000252542 APOBRQ0VD83 1088 aa17.86■□□□□ 0.45
SAFB2-201ENST00000252542 MTX1Q13505 466 aa17.86■□□□□ 0.45
SAFB2-201ENST00000252542 RXRAP19793 462 aa17.85■□□□□ 0.45
SAFB2-201ENST00000252542 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.85■□□□□ 0.45
SAFB2-201ENST00000252542 CDC37L1Q7L3B6 337 aa17.85■□□□□ 0.45
SAFB2-201ENST00000252542 SYAP1Q96A49 352 aaPredicted RBP17.85■□□□□ 0.45
SAFB2-201ENST00000252542 ZBTB1Q9Y2K1 713 aa17.85■□□□□ 0.45
SAFB2-201ENST00000252542 TAF5LO75529 589 aa17.85■□□□□ 0.45
SAFB2-201ENST00000252542 RRP12Q5JTH9 1297 aaKnown RBP17.85■□□□□ 0.45
SAFB2-201ENST00000252542 CCDC82Q8N4S0 544 aa17.85■□□□□ 0.45
SAFB2-201ENST00000252542 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
SAFB2-201ENST00000252542 NCOA3Q9Y6Q9 1424 aa17.84■□□□□ 0.45
SAFB2-201ENST00000252542 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
SAFB2-201ENST00000252542 NFAT5O94916 1531 aa17.84■□□□□ 0.45
SAFB2-201ENST00000252542 AOX1Q06278 1338 aa17.84■□□□□ 0.45
SAFB2-201ENST00000252542 MST1RQ04912 1400 aa17.84■□□□□ 0.45
SAFB2-201ENST00000252542 LTN1O94822 1766 aa17.84■□□□□ 0.45
SAFB2-201ENST00000252542 F13A1P00488 732 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 MCMDC2Q4G0Z9 681 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 SPC24Q8NBT2 197 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 COPRSQ9NQ92 184 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 USP25Q9UHP3 1055 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 EYA2O00167 538 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 MBD3O95983 291 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 SLC4A8Q2Y0W8 1093 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 TSPY26PQ9H489 355 aa17.83■□□□□ 0.45
SAFB2-201ENST00000252542 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
SAFB2-201ENST00000252542 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
SAFB2-201ENST00000252542 CUL4AQ13619 759 aa17.82■□□□□ 0.44
SAFB2-201ENST00000252542 NECTIN1Q15223 517 aa17.82■□□□□ 0.44
SAFB2-201ENST00000252542 MAP4K1Q92918 833 aa17.82■□□□□ 0.44
SAFB2-201ENST00000252542 PDCL3Q9H2J4 239 aa17.82■□□□□ 0.44
SAFB2-201ENST00000252542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.445e-7■■□□□ 13.8
SAFB2-201ENST00000252542 HEG1Q9ULI3 1381 aa17.82■□□□□ 0.44
SAFB2-201ENST00000252542 TNS3Q68CZ2 1445 aa17.82■□□□□ 0.44
SAFB2-201ENST00000252542 UQCRHLA0A096LP55 91 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms